Metamenu

Genomes encoding eukaryotic-like proteins

PF00295 Glycosyl hydrolases family 28

Copy number in non-pathogens:
Mean=0.33 Stddev=1.13

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides reticulotermitis JCM 10512 s 10 12
Bacteroides graminisolvens DSM 19988 = JCM 15093 s 5 7
Alistipes senegalensis JC50 s 5 7
Bacteroides xylanisolvens SD CC 1b s 5 7
Bacteroides xylanisolvens SD CC 2a s 5 7
Bacillus dielmoensis s 4 5
Bacteroides thetaiotaomicron s 5 7
Bacteroides thetaiotaomicron s 7 9
Bacteroides thetaiotaomicron s 6 8
Bacteroides vulgatus s 9 11
Bacteroides thetaiotaomicron s 5 7
Bacteroides vulgatus s 6 8
Bacteroides thetaiotaomicron s 8 10
Bacteroides ovatus s 10 12
Bacteroides vulgatus s 10 12
Bacteroides thetaiotaomicron s 10 12
Bacteroides stercoris ATCC 43183 s 4 5
Bacteroides coprocola DSM 17136 s 4 5
Bacteroides intestinalis DSM 17393 s 9 11
Bacteroides plebeius DSM 17135 s 5 6
Bacteroides dorei DSM 17855 s 14 17
Bacteroides xylanisolvens SD CC 1b s 5 7
Bacteroides vulgatus PC510 s 9 11
Bacteroides xylanisolvens SD CC 2a s 5 7
Bacteroides ovatus SD CMC 3f s 8 10
Bacteroides cellulosilyticus DSM 14838 s 20 23
Bacteroides finegoldii DSM 17565 s 8 10
Hungatella hathewayi DSM 13479 s 4 5
Bacteroides sp. 3_1_13 s 10 12
Prevotella bergensis DSM 17361 s 4 5
Bacteroides clarus YIT 12056 s 6 8
Bacteroides fluxus YIT 12057 s 5 7
Paraprevotella xylaniphila YIT 11841 s 4 5
Prevotella dentalis DSM 3688 s 4 5
Bacteroides ovatus ATCC 8483 s 11 13
Bacteroides salanitronis DSM 18170 s 8 10
Flavobacterium sp. CF136 s 9 11
Prevotella dentalis DSM 3688 s 4 5
Flavobacterium sp. F52 s 5 6
Clostridium sp. KLE 1755 s 4 5
Bacteroides cellulosilyticus WH2 s 20 24
Paraburkholderia sprentiae WSM5005 s 4 5
Runella zeae DSM 19591 s 4 5
Dysgonomonas capnocytophagoides DSM 22835 s 7 9
Bacteroides graminisolvens DSM 19988 = JCM 15093 s 6 8
Bacteroides gallinarum DSM 18171 = JCM 13658 s 5 6
Flavobacterium denitrificans DSM 15936 s 4 5
Echinicola pacifica DSM 19836 s 5 6
Bacteroides sp. 1_1_6 s 6 8
Bacteroides sp. 2_2_4 s 7 9
Bacteroides sp. 4_3_47FAA s 8 10
Bacteroides sp. 9_1_42FAA s 12 15
Bacteroides sp. D1 s 5 7
Bacteroides sp. D2 s 11 13
Bacteroides dorei 5_1_36/D4 s 15 18
Bacteroides sp. 2_1_22 s 5 7
Bacteroides sp. 3_1_33FAA s 13 16
Bacteroides sp. 3_1_23 s 10 12
Bacteroides sp. 3_1_40A s 9 11
Bacteroides ovatus 3_8_47FAA s 11 13
Bacteroides sp. D22 s 9 11
Bacteroides sp. 1_1_30 s 8 10
Alistipes indistinctus YIT 12060 s 4 5
Bacteroides oleiciplenus YIT 12058 s 17 20
Dysgonomonas gadei ATCC BAA-286 s 5 7
Bacteroides cellulosilyticus CL02T12C19 s 17 20
Bacteroides dorei CL02T00C15 s 14 17
Bacteroides dorei CL02T12C06 s 14 17
Bacteroides dorei CL03T12C01 s 13 16
Bacteroides nordii CL02T12C05 s 9 11
Bacteroides ovatus CL02T12C04 s 12 14
Bacteroides ovatus CL03T12C18 s 10 12
Bacteroides salyersiae CL02T12C01 s 6 8
Bacteroides vulgatus CL09T03C04 s 9 11
Bacteroides xylanisolvens CL03T12C04 s 4 5
Dickeya dadantii NCPPB 898 s 4 5
Dickeya sp. NCPPB 3274 s 4 5
Bacteroides faecis MAJ27 s 5 7
Hallella seregens ATCC 51272 s 5 6
Bacteroides sp. HPS0048 s 7 9
Hungatella hathewayi 12489931 s 6 8
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 6 8
Bacteroides stercoris CC31F s 4 5
Dickeya dadantii 3937 s 4 5
Prevotella ruminicola 23 s 4 5
Bacteroides vulgatus ATCC 8482 s 9 11
Sphingobacterium thalpophilum DSM 11723 s 5 6
Prevotella ruminicola s 4 5
Alteromonadaceae bacterium Bs31 s 5 6
Prevotella sp. MA2016 s 5 6
Prevotella oryzae DSM 17970 s 4 5
Bacteroides thetaiotaomicron s 7 9
Paenibacillus odorifer s 5 6
Bacteroides thetaiotaomicron s 6 8
Bacteroides ovatus s 12 14
Klebsiella oxytoca s 4 5
Bacteroides dorei CL03T12C01 s 13 16
Bacteroides ovatus s 11 13
Bacteroides thetaiotaomicron s 5 7
Bacteroides ovatus s 9 11
Bacteroides vulgatus s 5 6
Bacteroides thetaiotaomicron s 6 8
Polaribacter reichenbachii s 5 7
Opitutaceae bacterium TSB47 s 12 15
Bacteroides vulgatus s 8 10
Bacteroides xylanisolvens s 7 9
Prevotella ruminicola s 4 5
Prevotella ruminicola s 4 5
Bacteroides ovatus s 10 12
Bacteroides ovatus s 10 12
Bacteroides xylanisolvens s 7 9
Prevotella ruminicola s 5 6
Prevotella ruminicola s 5 6
Flavobacterium johnsoniae s 5 6
Flavobacterium johnsoniae s 5 7
Bacteroides ovatus s 11 13
Bacteroides clarus YIT 12056 s 6 8
Bacteroides faecis MAJ27 s 5 7
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 5 6
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 5 7
Paenibacillus odorifer s 5 7
Paenibacillus odorifer s 6 8
Paenibacillus odorifer s 6 8
Paenibacillus odorifer s 6 8
Paenibacillus odorifer s 5 7
Paenibacillus odorifer s 6 8
Paenibacillus odorifer s 5 7
Paenibacillus odorifer s 6 8
Paenibacillus odorifer s 4 5
Paenibacillus odorifer s 5 6
Paraburkholderia sprentiae WSM5005 s 4 5
Bacteroides thetaiotaomicron s 5 7
Flavobacterium johnsoniae s 5 6
Paenibacillus odorifer s 5 7
Paenibacillus odorifer s 6 8
Sphingobacterium sp. B29 s 4 5
Polaribacter reichenbachii s 5 7
Lentzea kentuckyensis s 4 5
Bacteroides xylanisolvens s 4 5
Bacteroides xylanisolvens s 5 6
Bacteroides dorei s 14 17
Bacteroides ovatus s 10 12
Bacteroides dorei s 15 18
Bacteroides thetaiotaomicron VPI-5482 s 6 8

*p=pathogen;s=symbiont