Metamenu

Genomes encoding eukaryotic-like proteins

PF00331 Glycosyl hydrolase family 10

Copy number in non-pathogens:
Mean=0.44 Stddev=1.09

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Cellulosilyticum ruminicola JCM 14822 s 6 7
Herbidospora cretacea s 7 9
Streptomyces scabiei s 4 5
Streptomyces turgidiscabies s 5 6
Streptomyces acidiscabies s 6 7
Streptomyces acidiscabies s 5 6
Bacteroides intestinalis DSM 17393 s 5 6
Paenibacillus sp. JDR-2 s 4 5
Micromonospora sp. L5 s 4 5
Bacteroides cellulosilyticus DSM 14838 s 4 5
Ruminococcus albus 7 = DSM 20455 s 4 5
Bacteroides ovatus ATCC 8483 s 5 6
Cellulomonas gilvus ATCC 13127 s 5 6
Didymococcus colitermitum TAV2 s 4 5
Teredinibacter turnerae T7902 s 9 11
Teredinibacter turnerae T8602 s 8 10
Opitutaceae bacterium TAV1 s 5 6
Streptomyces turgidiscabies Car8 s 5 6
Bacteroides cellulosilyticus WH2 s 6 7
Teredinibacter turnerae T8415 s 8 10
Teredinibacter turnerae T0609 s 8 10
Ruminiclostridium thermocellum JW20 s 4 5
Bacteroides sp. 2_2_4 s 4 5
Bacteroides oleiciplenus YIT 12058 s 6 7
Bacteroides cellulosilyticus CL02T12C19 s 5 6
Ruminococcus flavefaciens FD-1 s 5 6
Eubacterium xylanophilum ATCC 35991 s 11 13
Ruminococcus albus AD2013 s 4 5
Ruminococcus flavefaciens AE3010 s 4 5
Fibrobacter succinogenes subsp. succinogenes S85 s 6 7
Butyrivibrio proteoclasticus B316 s 4 5
Paenibacillus mucilaginosus 3016 s 4 5
Teredinibacter turnerae T7901 s 8 10
Fibrobacter succinogenes subsp. succinogenes S85 s 6 7
Herbidospora cretacea s 6 7
Ruminococcus albus 7 = DSM 20455 s 4 5
Butyrivibrio proteoclasticus FD2007 s 4 5
Butyrivibrio sp. MC2021 s 4 5
Ruminococcus sp. HUN007 s 4 5
Butyrivibrio fibrisolvens DSM 3071 s 4 5
Alteromonadaceae bacterium Bs12 s 8 10
Alteromonadaceae bacterium Bs31 s 7 9
Teredinibacter sp. 991H.S.0a.06 s 10 12
Butyrivibrio sp. AE3004 s 4 5
Streptomyces scabiei s 4 5
Streptomyces scabiei s 4 5
Streptomyces europaeiscabiei s 4 5
Bacteroides ovatus s 5 6
Streptomyces scabiei s 4 5
Streptomyces scabiei s 4 5
Streptomyces scabiei s 4 5
Streptomyces scabiei s 5 6
Streptomyces scabiei s 4 5
Streptomyces europaeiscabiei s 4 5
Streptomyces europaeiscabiei s 4 5
Streptomyces scabiei s 4 5
Treponema bryantii s 5 6
Micromonospora chokoriensis s 4 5
Streptomyces acidiscabies s 5 6
Streptomyces acidiscabies s 4 5
Streptomyces acidiscabies s 5 6
Streptomyces acidiscabies s 5 6
Bacteroides ovatus s 5 6
Amycolatopsis lexingtonensis s 5 6
Lentzea kentuckyensis s 4 5
Clostridiales bacterium s 4 5

*p=pathogen;s=symbiont