Metamenu

Genomes encoding eukaryotic-like proteins

PF00413 Matrixin

Copy number in non-pathogens:
Mean=0.23 Stddev=0.74

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Lactobacillus brevis s 7 6
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia sp. 2880STDY5682894 s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Listeria ivanovii subsp. ivanovii PAM 55 s 5 4
Lactobacillus brevis s 7 6
Lactobacillus brevis s 7 6
Lactobacillus brevis s 7 6
Lactobacillus brevis s 7 6
Lactobacillus brevis s 7 6
Lactobacillus brevis subsp. gravesensis ATCC 27305 s 6 5
Lactobacillus buchneri ATCC 11577 s 5 4
Dickeya zeae MS1 s 5 4
Lactobacillus parafarraginis F0439 s 9 7
Lactobacillus kisonensis F0435 s 10 8
Listeria innocua ATCC 33091 s 5 4
Lactobacillus brevis ATCC 14869 = DSM 20054 s 6 5
Lactobacillus diolivorans DSM 14421 s 5 4
Lactobacillus parabrevis ATCC 53295 s 9 7
Lactobacillus spicheri DSM 15429 s 9 7
Lactobacillus brevis ATCC 14869 = DSM 20054 s 6 5
Lactobacillus parabrevis ATCC 53295 s 9 7
Lactobacillus pentosus KCA1 s 5 4
Dickeya zeae NCPPB 3532 s 5 4
Dickeya dadantii NCPPB 898 s 5 4
Dickeya zeae NCPPB 2538 s 5 4
Dickeya solani IPO 2222 s 5 4
Dickeya solani GBBC 2040 s 5 4
Dickeya zeae CSL RW192 s 5 4
Dickeya sp. NCPPB 3274 s 5 4
Dickeya solani MK10 s 5 4
Dickeya zeae NCPPB 3531 s 5 4
Dickeya dadantii NCPPB 3537 s 5 4
Dickeya dadantii subsp. dieffenbachiae NCPPB 2976 s 5 4
Lactobacillus plantarum LP91 s 5 4
Dickeya solani D s0432-1 s 5 4
Dickeya zeae ZJU1202 s 5 4
Serratia marcescens BIDMC 81 s 5 4
Lactobacillus brevis AG48 s 7 6
Dickeya dadantii 3937 s 5 4
Listeria innocua s 5 4
Lactobacillus brevis s 5 4
Proteus mirabilis s 5 4
Serratia marcescens s 5 4
Proteus mirabilis s 5 4
Proteus mirabilis s 5 4
Lactobacillus brevis s 6 5
Lactobacillus brevis s 7 6
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Weissella cibaria s 5 4
Weissella cibaria s 5 4
Weissella cibaria s 5 4
Lactobacillus brevis s 6 5
Serratia marcescens s 5 4
Listeria monocytogenes s 5 4
Listeria monocytogenes s 5 4
Listeria monocytogenes s 5 4
Lactobacillus brevis s 6 5
Lactobacillus brevis s 7 6
Serratia marcescens subsp. marcescens s 5 4
Lactobacillus brevis s 7 6
Proteus mirabilis s 5 4
Proteus mirabilis s 5 4
Serratia marcescens s 5 4
Weissella cibaria s 5 4
Weissella cibaria s 5 4
Weissella cibaria s 5 4
Weissella cibaria s 5 4
Lactobacillus brevis s 6 5
Lactobacillus brevis s 7 6
Serratia marcescens s 6 5
Lactobacillus brevis s 7 6
Lactobacillus brevis s 7 6
Lactobacillus brevis s 6 5
Dickeya solani IPO 2222 s 5 4
Lactobacillus brevis s 7 6
Lactobacillus brevis s 6 5
Proteus mirabilis s 5 4
Lactobacillus brevis s 6 5
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Serratia marcescens s 5 4
Lactobacillus brevis s 7 6
Lactobacillus brevis s 6 5
Weissella cibaria s 5 4
Lactobacillus brevis s 5 4
Lactobacillus brevis s 7 6
Lactobacillus brevis s 7 6
Serratia marcescens s 5 4
Lactobacillus plantarum WCFS1 s 5 4

*p=pathogen;s=symbiont