Genomes encoding eukaryotic-like proteins
PF00432 Prenyltransferase and squalene oxidase repeat
Copy number in non-pathogens:
Mean=0.17 Stddev=0.56
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Haloferula sp. BvORR071 | s | 6 | 4 |
| Verrucomicrobium sp. BvORR034 | s | 8 | 5 |
| Verrucomicrobium sp. BvORR106 | s | 12 | 7 |
| Chthoniobacter flavus Ellin428 | s | 6 | 4 |
| Akkermansia muciniphila ATCC BAA-835 | s | 5 | 3 |
| Rhodopirellula baltica SWK14 | s | 5 | 3 |
| Clostridium lundense DSM 17049 | s | 5 | 3 |
| Akkermansia muciniphila | s | 5 | 3 |
| Micromonospora chokoriensis | s | 5 | 3 |
| Akkermansia sp. KLE1605 | s | 5 | 3 |
| Akkermansia muciniphila | s | 5 | 3 |
| Streptomyces acidiscabies | s | 8 | 5 |
| Akkermansia muciniphila | s | 5 | 3 |
*p=pathogen;s=symbiont
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
