Metamenu

Genomes encoding eukaryotic-like proteins

PF00544 Pectate lyase

Copy number in non-pathogens:
Mean=0.30 Stddev=0.96

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Streptomyces turgidiscabies s 5 6
Streptomyces acidiscabies s 5 6
Streptomyces acidiscabies s 5 6
Pectobacterium atrosepticum SCRI1043 s 4 5
Actinosynnema mirum DSM 43827 s 4 5
Flavobacterium sp. CF136 s 6 7
Dickeya zeae MS1 s 5 6
Streptomyces turgidiscabies Car8 s 5 6
Streptomyces ipomoeae 91-03 s 8 8
Pectobacterium atrosepticum CFBP 6276 s 4 5
Dickeya zeae NCPPB 3532 s 5 6
Dickeya dadantii NCPPB 898 s 5 6
Dickeya dianthicola IPO 980 s 4 5
Dickeya paradisiaca NCPPB 2511 s 4 5
Dickeya zeae NCPPB 2538 s 6 7
Dickeya chrysanthemi NCPPB 3533 s 5 6
Dickeya solani IPO 2222 s 5 6
Dickeya solani GBBC 2040 s 5 6
Dickeya zeae CSL RW192 s 4 5
Dickeya dianthicola NCPPB 453 s 5 6
Dickeya sp. NCPPB 3274 s 6 7
Dickeya dianthicola NCPPB 3534 s 5 6
Dickeya solani MK10 s 5 6
Dickeya zeae NCPPB 3531 s 4 5
Dickeya dadantii NCPPB 3537 s 5 6
Dickeya dianthicola GBBC 2039 s 4 5
Dickeya dadantii subsp. dieffenbachiae NCPPB 2976 s 4 5
Cellvibrio sp. BR s 4 5
Paenibacillus sp. Aloe-11 s 4 5
Dickeya solani D s0432-1 s 5 6
Pectobacterium carotovorum subsp. brasiliensis PBR1692 s 4 5
Dickeya zeae ZJU1202 s 5 6
Fibrobacter succinogenes subsp. succinogenes S85 s 4 5
Paenibacillus mucilaginosus 3016 s 5 6
Dickeya dadantii 3937 s 6 7
Treponema berlinense s 5 6
Alteromonadaceae bacterium Bs31 s 10 10
Pectobacterium atrosepticum s 4 5
Streptomyces scabiei s 6 7
Streptomyces acidiscabies s 5 6
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium atrosepticum s 4 5
Pectobacterium atrosepticum s 4 5
Pectobacterium atrosepticum s 4 5
Pectobacterium carotovorum subsp. odoriferum s 4 5
Pectobacterium carotovorum subsp. odoriferum s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Streptomyces europaeiscabiei s 6 7
Pectobacterium atrosepticum ICMP 1526 s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5
Streptomyces europaeiscabiei s 6 7
Streptomyces europaeiscabiei s 6 7
Streptomyces sp. 96-12 s 4 5
Dickeya solani IPO 2222 s 5 6
Streptomyces acidiscabies s 5 6
Streptomyces acidiscabies s 5 6
Streptomyces acidiscabies s 5 6
Streptomyces acidiscabies s 5 6
Paenibacillus kribbensis s 4 5
Asanoa hainanensis s 6 7
Streptomyces scabiei s 4 5
Streptomyces scabiei s 6 7
Streptomyces scabiei s 6 7
Streptomyces scabiei s 4 5
Pectobacterium carotovorum subsp. brasiliense s 4 5

*p=pathogen;s=symbiont