Metamenu

Genomes encoding eukaryotic-like proteins

PF00754 F5/8 type C domain

Copy number in non-pathogens:
Mean=1.21 Stddev=2.95

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Herbidospora cretacea s 6 20
Haloferula sp. BvORR071 s 5 17
Clostridium perfringens str. 13 s 5 16
Bacteroides fragilis NCTC 9343 s 5 17
Bacteroides fragilis 638R s 4 15
Bacteroides xylanisolvens SD CC 1b s 5 17
Bacteroides xylanisolvens SD CC 2a s 5 16
Bacteroides thetaiotaomicron s 7 24
Bacteroides thetaiotaomicron s 9 29
Bacteroides fragilis s 5 17
Bacteroides thetaiotaomicron s 9 28
Clostridium perfringens s 6 19
[Ruminococcus] torques s 5 18
Bacteroides thetaiotaomicron s 8 25
Bacteroides thetaiotaomicron s 10 32
Bacteroides ovatus s 4 15
Bacteroides thetaiotaomicron s 10 32
Bacteroides intestinalis DSM 17393 s 4 15
Paenibacillus sp. JDR-2 s 5 17
Tyzzerella nexilis DSM 1787 s 6 21
Bacteroides xylanisolvens SD CC 1b s 5 18
Bacteroides xylanisolvens SD CC 2a s 5 18
Bacteroides ovatus SD CMC 3f s 4 14
Bacteroides cellulosilyticus DSM 14838 s 4 15
[Clostridium] methylpentosum DSM 5476 s 11 35
Kutzneria sp. 744 s 8 27
Bacteroides sp. 3_1_13 s 4 15
Clostridium perfringens F262 s 5 17
Bacteroides caccae ATCC 43185 s 8 25
Bacteroides ovatus ATCC 8483 s 4 15
[Clostridium] spiroforme DSM 1552 s 6 21
Ruminococcus torques ATCC 27756 s 4 15
Parabacteroides sp. ASF519 s 5 17
Bacteroides fragilis str. J-143-4 s 5 16
Bacteroides fragilis str. I1345 s 5 17
Bacteroides fragilis str. J38-1 s 5 17
Bacteroides fragilis str. A7 (UDC12-2) s 5 17
Bacteroides fragilis str. Ds-233 s 5 16
Bacteroides fragilis str. DS-208 s 5 17
Bacteroides fragilis str. DS-71 s 5 17
Bacteroides fragilis str. DS-166 s 5 17
Bacteroides fragilis str. 20793-3 s 6 19
Bacteroides fragilis str. 2-F-2 #4 s 6 19
Bacteroides fragilis str. 2-F-2 #7 s 6 19
Bacteroides fragilis str. 3988 T1 s 4 15
Bacteroides fragilis str. S13 L11 s 5 17
Bacteroides fragilis str. S23 R14 s 5 16
Bacteroides fragilis str. 1007-1-F #7 s 5 18
Bacteroides fragilis str. 1007-1-F #8 s 5 18
Bacteroides fragilis str. 1007-1-F #9 s 5 18
Bacteroides fragilis str. 1009-4-F #7 s 5 17
Bacteroides fragilis str. 1007-1-F #10 s 5 18
Bacteroides fragilis str. 1009-4-F #10 s 5 17
Bacteroides fragilis str. 3397 T14 s 5 16
Bacteroides fragilis str. 3397 N2 s 4 15
Bacteroides fragilis str. 3719 A10 s 4 15
Bacteroides fragilis str. 3774 T13 s 5 17
Bacteroides fragilis str. 2-F-2 #5 s 6 19
Bacteroides fragilis str. 3783N1-2 s 5 17
Bacteroides fragilis str. 3783N1-6 s 5 17
Bacteroides fragilis str. 3397 N3 s 5 16
Bacteroides fragilis str. 3719 T6 s 5 16
Bacteroides fragilis str. 3783N1-8 s 5 17
Bacteroides fragilis str. 3996 N(B) 6 s 5 16
Bacteroides fragilis str. 3783N2-1 s 5 17
Bacteroides fragilis str. 3998 T(B) 4 s 5 17
Bacteroides fragilis str. 3986 T(B)9 s 5 16
Bacteroides fragilis str. 3976T7 s 5 17
Bacteroides fragilis str. 3986T(B)10 s 5 16
Bacteroides fragilis str. 3976T8 s 5 17
Bacteroides fragilis str. 3986 T(B)13 s 5 16
Bacteroides fragilis str. 3986 N(B)22 s 5 16
Bacteroides fragilis str. 3988T(B)14 s 5 16
Bacteroides fragilis str. S6L3 s 5 16
Bacteroides fragilis str. S6L8 s 5 16
Bacteroides fragilis str. S6R5 s 5 16
Bacteroides fragilis str. S6R6 s 5 16
Bacteroides fragilis str. S24L15 s 5 16
Bacteroides fragilis str. S24L26 s 5 16
Bacteroides fragilis str. S24L34 s 5 16
Bacteroides fragilis str. S36L5 s 5 17
Bacteroides fragilis str. S36L11 s 5 17
Bacteroides fragilis str. S23L24 s 5 16
Bacteroides fragilis str. S38L3 s 5 16
Bacteroides fragilis str. S38L5 s 5 16
Bacteroides fragilis str. 3-F-2 #6 s 5 18
Bacteroides fragilis str. 34-F-2 #13 s 6 19
Bacteroides fragilis str. 1007-1-F #3 s 5 18
Bacteroides fragilis str. 1007-1-F #4 s 5 18
Bacteroides fragilis str. 3986 N(B)19 s 5 16
Bacteroides fragilis str. 3725 D9(v) s 5 17
Bacteroides fragilis str. 3998T(B)3 s 5 17
Bacteroides fragilis str. S36L12 s 5 17
Stigmatella aurantiaca DW4/3-1 s 4 15
Clostridium perfringens E str. JGS1987 s 5 17
Clostridium perfringens CPE str. F4969 s 5 17
Clostridium perfringens NCTC 8239 s 5 18
Clostridium perfringens D str. JGS1721 s 5 18
Clostridium perfringens C str. JGS1495 s 4 14
Clostridium perfringens B str. ATCC 3626 s 5 18
Clostridium celatum DSM 1785 s 6 19
Actinopolymorpha alba DSM 45243 s 4 15
Parabacteroides gordonii DSM 23371 s 4 14
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 4 14
Bacteroides fragilis 3_1_12 s 5 18
Bacteroides sp. 1_1_6 s 9 28
Bacteroides sp. 3_2_5 s 5 16
Bacteroides sp. D1 s 5 17
Bacteroides sp. D2 s 5 16
Bacteroides sp. 2_1_16 s 5 16
Bacteroides sp. 2_1_22 s 5 18
Bacteroides sp. 3_1_23 s 5 18
Lachnospiraceae bacterium 1_1_57FAA s 5 17
Bacteroides ovatus 3_8_47FAA s 6 19
Lachnospiraceae bacterium 3_1_46FAA s 5 17
Lachnospiraceae bacterium 8_1_57FAA s 5 17
Bacteroides sp. D22 s 5 18
Bacteroides sp. 1_1_30 s 4 14
Lachnospiraceae bacterium 2_1_46FAA s 4 15
Bacteroides oleiciplenus YIT 12058 s 5 18
Clostridium perfringens WAL-14572 s 4 15
Bacteroides caccae CL03T12C61 s 8 27
Bacteroides fragilis CL03T00C08 s 5 16
Bacteroides fragilis CL03T12C07 s 5 17
Bacteroides fragilis CL05T12C13 s 4 15
Bacteroides fragilis CL07T00C01 s 5 17
Bacteroides fragilis CL07T12C05 s 5 17
Bacteroides nordii CL02T12C05 s 4 14
Bacteroides ovatus CL03T12C18 s 4 15
Bacteroides salyersiae CL02T12C01 s 6 20
Bacteroides xylanisolvens CL03T12C04 s 4 15
Parabacteroides goldsteinii CL02T12C30 s 5 17
Bacteroides fragilis HMW 610 s 5 16
Bacteroides fragilis HMW 615 s 4 15
Bacteroides fragilis HMW 616 s 5 16
Bacteroides faecis MAJ27 s 8 25
Bacteroides sp. HPS0048 s 5 17
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 6 19
Stigmatella aurantiaca DW4/3-1 s 5 17
Clostridium perfringens ATCC 13124 s 5 16
Bacteroides vulgatus ATCC 8482 s 4 14
Herbidospora cretacea s 7 22
Actinoplanes subtropicus s 5 18
Bacteroides fragilis s 5 18
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 17
[Clostridium] saccharogumia DSM 17460 s 8 25
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 18
Bacteroides fragilis s 6 19
Bacteroides thetaiotaomicron s 10 32
Clostridium perfringens s 5 16
Clostridium perfringens s 5 18
Bacteroides thetaiotaomicron s 9 29
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 17
Clostridium perfringens s 5 16
Clostridium perfringens s 6 21
Parabacteroides gordonii MS-1 s 4 14
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 6 19
Bacteroides fragilis s 5 17
Bacteroides fragilis s 4 15
Bacteroides fragilis s 6 19
Bacteroides fragilis s 5 16
Bacteroides fragilis s 4 14
Clostridium perfringens s 5 17
Bacteroides ovatus s 4 15
Bacteroides thetaiotaomicron s 9 29
Bacteroides fragilis s 5 18
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 17
Bacteroides fragilis s 5 17
Clostridium perfringens s 5 16
Bacteroides thetaiotaomicron s 9 29
Bacteroides xylanisolvens s 5 17
Bacteroides ovatus s 5 18
Bacteroides xylanisolvens s 5 17
Clostridium perfringens s 7 22
Clostridium perfringens s 6 21
Clostridium perfringens s 6 21
Clostridium perfringens s 5 17
Clostridium perfringens s 6 21
Clostridium perfringens s 6 21
Clostridium perfringens s 7 22
Clostridium perfringens s 6 21
Clostridium perfringens s 5 18
Clostridium perfringens s 6 21
Clostridium perfringens s 7 22
Clostridium perfringens s 6 21
Clostridium perfringens s 7 22
Clostridium perfringens s 4 15
Clostridium perfringens s 5 16
Clostridium perfringens s 6 21
Clostridium perfringens s 7 22
Clostridium perfringens s 7 22
Clostridium perfringens s 7 22
Clostridium perfringens s 7 22
Clostridium perfringens s 7 22
Clostridium perfringens s 6 21
Clostridium perfringens s 7 22
Clostridium perfringens s 5 16
Clostridium perfringens s 7 22
Clostridium perfringens s 5 16
Clostridium perfringens s 7 22
Clostridium perfringens s 7 22
Clostridium perfringens s 7 22
Clostridium perfringens s 7 22
Asanoa hainanensis s 5 18
Bacteroides fragilis s 4 15
Bacteroides ovatus s 4 15
Stigmatella aurantiaca s 5 18
Bacteroides faecis MAJ27 s 8 25
Bacteroides fragilis s 5 17
Paenibacillus odorifer s 5 18
Paenibacillus odorifer s 6 19
Bacteroides fragilis s 5 16
Bacteroides thetaiotaomicron s 9 29
Clostridium perfringens s 5 16
Clostridium perfringens s 5 17
Amycolatopsis kentuckyensis s 5 16
Amycolatopsis lexingtonensis s 5 16
Amycolatopsis pretoriensis s 7 23
Lentzea kentuckyensis s 5 17
Bacteroides xylanisolvens s 5 18
Bacteroides xylanisolvens s 6 19
Bacteroides ovatus s 4 15
Bacteroides fragilis YCH46 s 5 16
Bacteroides thetaiotaomicron VPI-5482 s 10 33

*p=pathogen;s=symbiont