Metamenu

Genomes encoding eukaryotic-like proteins

PF01120 Alpha-L-fucosidase

Copy number in non-pathogens:
Mean=0.49 Stddev=1.63

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides coprophilus DSM 18228 = JCM 13818 s 5 10
Streptomyces turgidiscabies s 4 8
Bacteroides fragilis NCTC 9343 s 4 8
Bacteroides fragilis 638R s 4 8
Bacteroides fragilis s 4 8
Bacteroides thetaiotaomicron s 4 8
Zobellia galactanivorans s 10 17
Bacteroides thetaiotaomicron s 5 10
Bacteroides fragilis s 5 9
Bacteroides thetaiotaomicron s 4 8
Bacteroides vulgatus s 4 8
Bacteroides vulgatus s 4 8
Bacteroides thetaiotaomicron s 4 8
Bacteroides vulgatus s 4 8
Bacteroides thetaiotaomicron s 6 11
Elizabethkingia anophelis s 4 8
Bacteroides plebeius DSM 17135 s 5 9
Bacteroides dorei DSM 17855 s 5 9
Sphingobacterium spiritivorum ATCC 33861 s 5 9
Bacteroides vulgatus PC510 s 4 8
Bacteroides cellulosilyticus DSM 14838 s 5 9
Bacteroides coprophilus DSM 18228 = JCM 13818 s 8 14
Paenibacillus sp. HGF5 s 4 8
Flectobacillus major DSM 103 s 4 8
Bacteroides caccae ATCC 43185 s 7 12
Parabacteroides sp. ASF519 s 6 11
Bacteroides fragilis str. J-143-4 s 5 9
Bacteroides fragilis str. I1345 s 5 9
Bacteroides fragilis str. J38-1 s 5 9
Bacteroides fragilis str. A7 (UDC12-2) s 5 9
Bacteroides fragilis str. Ds-233 s 5 9
Bacteroides fragilis str. DS-208 s 5 10
Bacteroides fragilis str. DS-71 s 5 9
Bacteroides fragilis str. DS-166 s 5 9
Bacteroides fragilis str. 20793-3 s 7 12
Bacteroides fragilis str. 2-F-2 #4 s 7 12
Bacteroides fragilis str. 2-F-2 #7 s 7 12
Bacteroides fragilis str. 3988 T1 s 4 8
Bacteroides fragilis str. S13 L11 s 5 9
Bacteroides fragilis str. S23 R14 s 4 8
Bacteroides fragilis str. 1007-1-F #7 s 5 9
Bacteroides fragilis str. 1007-1-F #8 s 5 9
Bacteroides fragilis str. 1007-1-F #9 s 5 9
Bacteroides fragilis str. 1009-4-F #7 s 5 9
Bacteroides fragilis str. 1007-1-F #10 s 5 9
Bacteroides fragilis str. 1009-4-F #10 s 5 9
Bacteroides fragilis str. 3397 T14 s 5 9
Bacteroides fragilis str. 3397 N2 s 5 9
Bacteroides fragilis str. 3719 A10 s 5 10
Bacteroides fragilis str. 3774 T13 s 5 9
Bacteroides fragilis str. 2-F-2 #5 s 7 12
Bacteroides fragilis str. 3783N1-2 s 5 9
Bacteroides fragilis str. 3783N1-6 s 4 8
Bacteroides fragilis str. 3397 N3 s 5 9
Bacteroides fragilis str. 3719 T6 s 5 9
Bacteroides fragilis str. 3783N1-8 s 4 8
Bacteroides fragilis str. 3996 N(B) 6 s 5 9
Bacteroides fragilis str. 3783N2-1 s 4 8
Bacteroides fragilis str. 3998 T(B) 4 s 5 9
Bacteroides fragilis str. 3986 T(B)9 s 4 8
Bacteroides fragilis str. 3976T7 s 4 8
Bacteroides fragilis str. 3986T(B)10 s 4 8
Bacteroides fragilis str. 3976T8 s 5 9
Bacteroides fragilis str. 3986 T(B)13 s 4 8
Bacteroides fragilis str. 3986 N(B)22 s 4 8
Bacteroides fragilis str. 3988T(B)14 s 4 8
Bacteroides fragilis str. S6L3 s 5 9
Bacteroides fragilis str. S6L8 s 5 9
Bacteroides fragilis str. S6R5 s 5 9
Bacteroides fragilis str. S6R6 s 5 9
Bacteroides fragilis str. S24L15 s 5 10
Bacteroides fragilis str. S24L26 s 5 10
Bacteroides fragilis str. S24L34 s 5 10
Bacteroides fragilis str. S36L5 s 5 9
Bacteroides fragilis str. S36L11 s 5 9
Bacteroides fragilis str. S23L24 s 4 8
Bacteroides fragilis str. S38L3 s 5 9
Bacteroides fragilis str. S38L5 s 5 9
Bacteroides fragilis str. 3-F-2 #6 s 5 9
Bacteroides fragilis str. 34-F-2 #13 s 7 12
Bacteroides fragilis str. 1007-1-F #3 s 5 9
Bacteroides fragilis str. 1007-1-F #4 s 5 9
Bacteroides fragilis str. 3986 N(B)19 s 5 9
Bacteroides fragilis str. 3725 D9(v) s 4 8
Bacteroides fragilis str. 3998T(B)3 s 5 9
Bacteroides fragilis str. S36L12 s 5 9
Streptomyces turgidiscabies Car8 s 4 8
Clostridium sp. KLE 1755 s 8 14
Bacteroides cellulosilyticus WH2 s 5 9
Arenibacter certesii DSM 19833 s 5 9
Parabacteroides gordonii DSM 23371 s 8 14
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 7 12
Echinicola pacifica DSM 19836 s 10 18
Bacteroides fragilis 3_1_12 s 5 9
Bacteroides sp. 3_2_5 s 4 8
Bacteroides sp. 4_3_47FAA s 6 11
Bacteroides sp. 9_1_42FAA s 5 9
Bacteroides dorei 5_1_36/D4 s 5 9
Bacteroides sp. 2_1_16 s 4 8
Bacteroides sp. 3_1_33FAA s 4 8
Bacteroides sp. 3_1_40A s 5 9
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 10 17
Bacteroides caccae CL03T12C61 s 7 13
Bacteroides cellulosilyticus CL02T12C19 s 5 9
Bacteroides dorei CL03T12C01 s 5 9
Bacteroides fragilis CL03T00C08 s 5 9
Bacteroides fragilis CL03T12C07 s 5 9
Bacteroides fragilis CL05T12C13 s 5 10
Bacteroides fragilis CL07T00C01 s 5 9
Bacteroides fragilis CL07T12C05 s 5 9
Bacteroides ovatus CL02T12C04 s 5 9
Parabacteroides goldsteinii CL02T12C30 s 5 9
Bacteroides fragilis HMW 610 s 5 9
Bacteroides fragilis HMW 615 s 5 10
Bacteroides fragilis HMW 616 s 5 9
Ochrovirga pacifica s 5 9
Elizabethkingia anophelis Ag1 s 4 8
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 7 12
Pedobacter borealis DSM 19626 s 7 12
Bacteroides vulgatus ATCC 8482 s 4 8
Bacteroides fragilis s 4 8
Bacteroides fragilis s 5 9
Sphingobacterium thalpophilum DSM 11723 s 5 10
Elizabethkingia anophelis s 4 8
Bacteroides fragilis s 5 9
Bacteroides fragilis s 6 11
Bacteroides fragilis s 7 12
Bacteroides thetaiotaomicron s 4 8
Sphingobacterium sp. ML3W s 4 8
Bacteroides fragilis s 5 9
Bacteroides fragilis s 5 9
Bacteroides fragilis s 5 9
Bacteroides fragilis s 5 9
Bacteroides fragilis s 5 9
Parabacteroides sp. HGS0025 s 7 12
Parabacteroides gordonii MS-1 s 8 14
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 6 11
Bacteroides fragilis s 5 9
Bacteroides ovatus s 5 9
Bacteroides dorei CL03T12C01 s 5 9
Bacteroides fragilis s 5 9
Bacteroides fragilis s 7 12
Bacteroides fragilis s 5 9
Bacteroides fragilis s 4 8
Bacteroides fragilis s 5 9
Bacteroides fragilis s 5 9
Bacteroides fragilis s 4 8
Bacteroides fragilis s 5 9
Streptomyces scabiei s 5 9
Bacteroides vulgatus s 4 8
Elizabethkingia endophytica s 4 8
Elizabethkingia endophytica s 4 8
Bacteroides fragilis s 4 8
Eisenbergiella tayi s 8 14
Eisenbergiella tayi s 8 14
Eisenbergiella tayi s 7 13
Eisenbergiella tayi s 8 14
Eisenbergiella tayi s 8 14
Eisenbergiella tayi s 8 14
Eisenbergiella tayi s 8 14
Bacteroides fragilis s 4 8
Bacteroides fragilis s 5 9
Eisenbergiella tayi s 7 12
Sphingobacterium sp. B29 s 12 21
Streptomyces rhizosphaericus s 8 14
Zobellia galactanivorans s 9 16
Bacteroides dorei s 5 9
Bacteroides dorei s 4 8
Bacteroides fragilis YCH46 s 5 9
Bacteroides thetaiotaomicron VPI-5482 s 5 9

*p=pathogen;s=symbiont