Metamenu

Genomes encoding eukaryotic-like proteins

PF01223 DNA/RNA non-specific endonuclease

Copy number in non-pathogens:
Mean=0.29 Stddev=0.59

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides reticulotermitis JCM 10512 s 4 3
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Alistipes timonensis JC136 s 4 3
Alistipes senegalensis JC50 s 4 3
Candidatus Protochlamydia amoebophila UWE25 p 6 4
Alistipes shahii WAL 8301 s 4 3
Bacteroides xylanisolvens SD CC 1b s 4 3
Bacteroides xylanisolvens SD CC 2a s 4 3
Bacteroides thetaiotaomicron s 4 3
Xanthomonas fuscans subsp. fuscans s 4 3
Zobellia galactanivorans s 4 3
Bacteroides thetaiotaomicron s 4 3
Campylobacter coli s 4 3
Bacteroides ovatus s 6 4
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Campylobacter coli s 4 3
Campylobacter coli s 4 3
Alistipes putredinis DSM 17216 s 6 4
Methylobacterium nodulans ORS 2060 s 4 3
Bacteroides xylanisolvens SD CC 1b s 4 3
Bacteroides xylanisolvens SD CC 2a s 4 3
Bacteroides ovatus SD CMC 3f s 4 3
Deinococcus proteolyticus MRP s 6 4
Bacteroides sp. 3_1_13 s 4 3
Bacteroides ovatus ATCC 8483 s 4 3
Xanthomonas axonopodis pv. manihotis str. UG24 s 4 3
Xanthomonas axonopodis pv. manihotis str. UG27 s 4 3
Xanthomonas axonopodis pv. manihotis str. UG28 s 4 3
Xanthomonas axonopodis pv. manihotis str. UG44 s 4 3
Xanthomonas axonopodis pv. manihotis str. UG45 s 4 3
Rivularia sp. PCC 7116 s 4 3
Geitlerinema sp. PCC 7105 s 6 4
Piscirickettsia salmonis AUSTRAL-005 s 4 3
Mesorhizobium sp. LNJC386A00 s 4 3
Prevotella sp. F0091 s 4 3
Prevotella intermedia ATCC 25611 = DSM 20706 s 4 3
Runella zeae DSM 19591 s 4 3
Alistipes onderdonkii WAL 8169 = DSM 19147 s 6 4
Bradyrhizobium japonicum USDA 135 s 4 3
Bacteroides sp. 1_1_6 s 4 3
Bacteroides sp. 2_2_4 s 4 3
Bacteroides sp. D1 s 4 3
Bacteroides sp. D2 s 4 3
Bacteroides sp. 2_1_22 s 4 3
Bacteroides sp. 3_1_23 s 4 3
Bacteroides sp. 4_1_36 s 4 3
Bacteroides ovatus 3_8_47FAA s 4 3
Prevotella melaninogenica D18 s 4 3
Alloprevotella rava F0323 s 4 3
Bacteroides sp. D22 s 4 3
Bacteroides sp. 1_1_30 s 4 3
Prevotella sp. C561 s 4 3
Prevotella histicola F0411 s 4 3
Bacteroides ovatus CL02T12C04 s 4 3
Bacteroides ovatus CL03T12C18 s 4 3
Bacteroides xylanisolvens CL03T12C04 s 4 3
Piscirickettsia salmonis LF-89 = ATCC VR-1361 s 6 4
Xanthomonas citri pv. glycines CFBP 7119 s 4 3
Xanthomonas alfalfae subsp. alfalfae CFBP 3836 s 4 3
Bacteroides faecis MAJ27 s 4 3
Piscirickettsia salmonis LF-89 = ATCC VR-1361 s 6 4
Streptococcus pyogenes ABC020056765 s 4 3
Streptococcus pyogenes ABC020006715 s 4 3
Streptococcus pyogenes ABC020013256 s 4 3
Prevotella intermedia ATCC 25611 = DSM 20706 s 4 3
Labrenzia sp. DG1229 s 4 3
Prevotella sp. oral taxon 317 str. F0108 s 4 3
Bacteroides stercoris CC31F s 4 3
Streptococcus pyogenes MGAS10394 s 4 3
Campylobacter jejuni RM1221 s 4 3
Streptococcus pyogenes s 4 3
Sinorhizobium sp. PC2 s 4 3
Prevotella sp. S7-1-8 s 4 3
Xanthomonas fuscans subsp. fuscans s 4 3
Xanthomonas citri p 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 6 4
Alistipes sp. ZOR0009 s 4 3
Xanthomonas fuscans subsp. fuscans s 4 3
Xanthomonas fuscans subsp. fuscans s 4 3
Xanthomonas fuscans subsp. fuscans s 4 3
Bacteroides thetaiotaomicron s 4 3
Campylobacter jejuni subsp. jejuni s 4 3
Campylobacter jejuni subsp. jejuni s 4 3
Campylobacter sp. BCW_4321 s 4 3
Campylobacter coli s 4 3
Campylobacter jejuni s 4 3
Campylobacter jejuni s 4 3
Campylobacter sp. BCW_6463 s 6 4
Campylobacter sp. BCW_6889 s 4 3
Prevotella intermedia s 4 3
Streptococcus pyogenes s 4 3
Bacteroides ovatus s 4 3
Piscirickettsia salmonis s 4 3
Acetobacter malorum s 4 3
Bacteroides ovatus s 4 3
Bacteroides thetaiotaomicron s 4 3
Bacteroides ovatus s 4 3
Pseudomonas fluorescens s 4 3
Streptococcus pyogenes s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Bacteroides thetaiotaomicron s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 6 4
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 6 4
Piscirickettsia salmonis s 6 4
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Piscirickettsia salmonis s 4 3
Hymenobacter sp. PAMC 26628 s 4 3
Bacteroides xylanisolvens s 4 3
Prevotella intermedia ATCC 25611 = DSM 20706 s 4 3
Campylobacter jejuni s 4 3
Campylobacter coli s 4 3
Gluconobacter cerinus s 4 3
Stenotrophomonas maltophilia s 4 3
Acetobacter pasteurianus s 7 5
Campylobacter jejuni s 4 3
Bacteroides ovatus s 4 3
Bacteroides xylanisolvens s 4 3
Prevotella ruminicola s 4 3
Alistipes timonensis JC136 s 4 3
Bacteroides ovatus s 4 3
Bacteroides faecis MAJ27 s 4 3
Pseudomonas fluorescens s 4 3
Xanthomonas gardneri s 4 3
Xanthomonas perforans s 4 3
Campylobacter jejuni subsp. jejuni s 4 3
Campylobacter jejuni subsp. jejuni s 4 3
Campylobacter jejuni subsp. jejuni s 4 3
Campylobacter jejuni subsp. jejuni s 4 3
Bacteroides thetaiotaomicron s 4 3
Flavobacterium columnare s 4 3
Zobellia galactanivorans s 4 3
Bacteroides xylanisolvens s 4 3
Bacteroides xylanisolvens s 4 3
Bacteroides ovatus s 4 3
Campylobacter jejuni s 4 3
Francisella halioticida s 4 3
Bacteroides thetaiotaomicron VPI-5482 s 4 3

*p=pathogen;s=symbiont