Metamenu

Genomes encoding eukaryotic-like proteins

PF01348 Type II intron maturase

Copy number in non-pathogens:
Mean=0.05 Stddev=0.30

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 6 2
Bacteroides reticulotermitis JCM 10512 s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Bacillus massiliosenegalensis JC6 s 6 2
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 6 2
Alistipes senegalensis JC50 s 6 2
Escherichia coli s 6 2
Escherichia coli s 6 2
Escherichia coli s 6 2
Escherichia coli s 6 2
Alistipes shahii WAL 8301 s 6 2
Bacteroides xylanisolvens SD CC 1b s 9 3
Bacteroides xylanisolvens SD CC 2a s 9 3
Mucinivorans hirudinis s 6 2
Parabacteroides distasonis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Clostridioides difficile s 6 2
Parabacteroides distasonis s 6 2
Bacteroides vulgatus s 6 2
Bacteroides thetaiotaomicron s 9 3
Flavonifractor plautii s 9 3
Parabacteroides distasonis s 13 4
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Streptococcus suis s 6 2
Clostridioides difficile s 6 2
Clostridioides difficile s 6 2
Clostridioides difficile s 6 2
Clostridioides difficile s 6 2
Streptococcus agalactiae s 9 3
Streptococcus agalactiae s 6 2
Streptococcus agalactiae s 6 2
Streptococcus agalactiae s 6 2
Streptococcus agalactiae s 6 2
Streptococcus agalactiae s 6 2
Streptococcus agalactiae s 6 2
Streptococcus agalactiae s 6 2
Streptococcus agalactiae s 6 2
Bacteroides stercoris ATCC 43183 s 6 2
Bacteroides coprocola DSM 17136 s 9 3
Bacteroides plebeius DSM 17135 s 6 2
Bacteroides dorei DSM 17855 s 9 3
Chryseobacterium gleum ATCC 35910 s 6 2
Bacteroides xylanisolvens SD CC 1b s 9 3
Bacteroides xylanisolvens SD CC 2a s 9 3
Bacteroides ovatus SD CMC 3f s 9 3
[Clostridium] bolteae WAL-14578 s 6 2
Alistipes sp. HGB5 s 6 2
[Clostridium] scindens ATCC 35704 s 6 2
[Clostridium] bolteae ATCC BAA-613 s 6 2
Flavonifractor plautii ATCC 29863 s 13 4
Ruminococcus callidus ATCC 27760 s 6 2
Bacillus thuringiensis serovar thuringiensis str. T01001 s 6 2
Bacillus thuringiensis IBL 200 s 6 2
Bacillus cereus AH1271 s 6 2
Bacillus thuringiensis serovar berliner ATCC 10792 s 6 2
Lachnospiraceae bacterium A4 s 6 2
Lachnospiraceae bacterium A2 s 16 5
Anaerotruncus sp. G3(2012) s 6 2
Oscillibacter sp. 1-3 s 9 3
Eubacterium plexicaudatum ASF492 s 6 2
Clostridium sp. ASF502 s 6 2
Alistipes finegoldii DSM 17242 s 13 4
Prevotella bivia DSM 20514 s 6 2
Microvirga lotononidis s 6 2
Bacteroides fragilis str. 2-F-2 #4 s 6 2
Bacteroides fragilis str. 2-F-2 #7 s 6 2
Bacteroides fragilis str. 3988 T1 s 6 2
Bacteroides fragilis str. 2-F-2 #5 s 6 2
Bacteroides fragilis str. 3996 N(B) 6 s 13 4
Bacteroides fragilis str. 3998 T(B) 4 s 9 3
Bacteroides fragilis str. 3988T(B)14 s 6 2
Bacteroides fragilis str. S36L5 s 16 5
Bacteroides fragilis str. S36L11 s 16 5
Frankia sp. Cc1.17 s 9 3
Bacteroides fragilis str. 3998T(B)3 s 20 6
Bacteroides fragilis str. S36L12 s 13 4
Clostridium perfringens D str. JGS1721 s 9 3
Clostridium sp. KLE 1755 s 6 2
Blautia wexlerae DSM 19850 s 6 2
Bacteroides gallinarum DSM 18171 = JCM 13658 s 6 2
Alistipes onderdonkii WAL 8169 = DSM 19147 s 6 2
Frankia sp. EUN1f s 6 2
Bacteroides sp. 1_1_6 s 9 3
Bacteroides sp. 2_2_4 s 13 4
Bacteroides sp. D1 s 9 3
Bacteroides dorei 5_1_36/D4 s 6 2
Bacteroides sp. 2_1_22 s 9 3
Parabacteroides sp. D13 s 6 2
Erysipelotrichaceae bacterium 6_1_45 s 9 3
Lachnospiraceae bacterium 7_1_58FAA s 9 3
Clostridium sp. 7_3_54FAA s 9 3
Bacteroides sp. D22 s 9 3
Bacteroides sp. 1_1_30 s 13 4
Erysipelotrichaceae bacterium 2_2_44A s 6 2
[Clostridium] symbiosum WAL-14673 s 6 2
Bacteroides caccae CL03T12C61 s 9 3
Bacteroides cellulosilyticus CL02T12C19 s 9 3
Bacteroides dorei CL02T00C15 s 6 2
Bacteroides dorei CL02T12C06 s 6 2
Bacteroides nordii CL02T12C05 s 6 2
Bacteroides ovatus CL02T12C04 s 6 2
Bacteroides ovatus CL03T12C18 s 6 2
Bacteroides salyersiae CL02T12C01 s 13 4
Bacteroides uniformis CL03T12C37 s 6 2
Parabacteroides goldsteinii CL02T12C30 s 9 3
Bacteroides fragilis HMW 610 s 9 3
Sporomusa ovata DSM 2662 s 6 2
Bacteroides faecis MAJ27 s 6 2
Bacillus thuringiensis serovar aizawai str. Leapi01 s 9 3
Ruminococcus gnavus AGR2154 s 6 2
Bacteroides sp. HPS0048 s 6 2
[Clostridium] bolteae 90B7 s 9 3
[Clostridium] bolteae 90B8 s 6 2
[Clostridium] bolteae 90A5 s 9 3
[Clostridium] clostridioforme 90A6 s 9 3
[Clostridium] clostridioforme 90B1 s 9 3
[Clostridium] clostridioforme 90A3 s 9 3
Bacteroides stercoris CC31F s 6 2
Novosphingobium aromaticivorans DSM 12444 s 6 2
Bacillus thuringiensis s 6 2
Escherichia coli s 6 2
Bacillus cereus s 6 2
Enterococcus gallinarum s 6 2
[Clostridium] lactatifermentans DSM 14214 s 13 4
Butyricicoccus desmolans ATCC 43058 s 6 2
Prevotella sp. S7-1-8 s 6 2
Bacteroides fragilis s 6 2
Bacteroides thetaiotaomicron s 13 4
Bacillus thuringiensis s 6 2
Bacteroides fragilis s 6 2
Bacteroides fragilis s 6 2
Bacteroides fragilis s 6 2
Bacillus cereus s 6 2
Bacillus thuringiensis s 6 2
Bacillus cereus s 13 4
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 13 4
Bacillus cereus s 6 2
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 6 2
Escherichia coli s 6 2
Bacillus thuringiensis s 9 3
Bacteroides ovatus s 13 4
Bacillus thuringiensis s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacteroides thetaiotaomicron s 6 2
Bacteroides caecimuris s 6 2
Flavonifractor plautii s 6 2
Bacteroides ovatus s 6 2
Bacillus cereus s 13 4
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus thuringiensis s 9 3
Bacillus thuringiensis s 9 3
Bacteroides xylanisolvens s 9 3
Bacillus thuringiensis s 9 3
Bacteroides caecimuris s 6 2
Lachnoclostridium sp. YL32 s 13 4
Bacillus cereus s 6 2
Bacillus cereus s 9 3
Bacteroides faecis MAJ27 s 6 2
Eisenbergiella tayi s 6 2
Eisenbergiella tayi s 6 2
Clostridioides difficile s 6 2
Bacillus cereus s 9 3
[Clostridium] clostridioforme s 13 4
Bacteroides thetaiotaomicron s 9 3
Bacillus cereus s 13 4
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus thuringiensis s 9 3
Bacillus thuringiensis s 16 5
Bacillus mycoides s 6 2
Bacillus thuringiensis s 6 2
Bacillus cereus s 6 2
Bacillus thuringiensis s 16 5
Bacteroides ovatus s 6 2
Flavonifractor plautii s 6 2
Bacteroides dorei s 6 2
Bacillus mycoides s 6 2
Bacillus thuringiensis s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2

*p=pathogen;s=symbiont