Metamenu

Genomes encoding eukaryotic-like proteins

PF01409 tRNA synthetases class II core domain (F)

Copy number in non-pathogens:
Mean=1.02 Stddev=0.22

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Nocardia mexicana NBRC 108244 s 4 2
Nocardia crassostreae s 4 2
Nocardia asiatica NBRC 100129 s 4 2
Nocardia abscessus NBRC 100374 s 4 2
Nocardia tenerifensis NBRC 101015 s 4 2
Nocardia transvalensis NBRC 15921 s 4 2
Microbacterium resistens NBRC 103078 s 4 2
Sanguibacter suarezii NBRC 16159 s 4 2
Azospirillum sp. B510 s 4 2
Clostridium sp. SY8519 s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Streptococcus pneumoniae s 4 2
Collinsella massiliensis s 4 2
Enorma timonensis s 4 2
Clostridium sp. CL-2 s 4 2
Clostridium saudiense s 4 2
Shigella sonnei s 4 2
Shigella sonnei s 4 2
Clostridium disporicum s 4 2
[Eubacterium] hallii s 4 2
Clostridium disporicum s 4 2
Clostridium disporicum s 4 2
[Eubacterium] hallii s 4 2
Clostridium tyrobutyricum s 4 2
Elizabethkingia anophelis s 4 2
Streptococcus pneumoniae MLV-016 s 4 2
Brevibacterium mcbrellneri ATCC 49030 s 4 2
Eubacterium nodatum ATCC 33099 s 4 2
Pseudomonas sp. GM49 s 4 2
Pseudomonas sp. GM67 s 4 2
Pseudomonas sp. GM74 s 4 2
Lachnospiraceae bacterium A4 s 4 2
Dickeya zeae MS1 s 4 2
Treponema saccharophilum DSM 2985 s 4 2
Desulfitobacterium hafniense DP7 s 4 2
Borrelia garinii IPT108 s 4 2
Borrelia garinii IPT120 s 4 2
Borrelia garinii IPT134 s 4 2
Borrelia burgdorferi IPT2 s 4 2
Borrelia burgdorferi IPT35 s 4 2
Borrelia burgdorferi IPT87 s 4 2
Borrelia burgdorferi IPT132 s 4 2
Borrelia afzelii Tom3107 s 4 2
[Eubacterium] hallii DSM 3353 s 4 2
Borrelia burgdorferi Bol26 s 4 2
Borrelia burgdorferi 72a s 4 2
Borrelia burgdorferi CA-11.2A s 4 2
Borrelia burgdorferi 118a s 4 2
Borrelia garinii PBr s 4 2
Borreliella spielmanii A14S s 4 2
Borrelia afzelii ACA-1 s 4 2
Borrelia garinii Far04 s 4 2
Borrelia burgdorferi WI91-23 s 4 2
Borreliella finlandensis s 4 2
Borrelia burgdorferi 64b s 4 2
Borrelia burgdorferi 29805 s 4 2
Borrelia burgdorferi 94a s 4 2
Borrelia burgdorferi 156a s 4 2
Clostridium celatum DSM 1785 s 4 2
Clostridium sp. KLE 1755 s 4 2
Actinopolymorpha alba DSM 45243 s 4 2
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 s 4 2
Sporomusa ovata DSM 2662 s 4 2
Bacteroides sp. 3_1_40A s 4 2
Eubacterium infirmum F0142 s 4 2
Paenibacillus sonchi X19-5 s 4 2
Anaplasma marginale str. South Idaho p 4 2
Pseudomonas fuscovaginae SE-1 s 4 2
Sporomusa ovata DSM 2662 s 4 2
Dickeya zeae NCPPB 3532 s 4 2
Dickeya zeae NCPPB 2538 s 4 2
Dickeya zeae CSL RW192 s 4 2
Dickeya zeae NCPPB 3531 s 4 2
Streptococcus sp. GMD4S s 4 2
Streptococcus sp. GMD1S s 4 2
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 s 4 2
Elizabethkingia anophelis NUHP1 s 4 2
Elizabethkingia anophelis NUHP2 s 4 2
Elizabethkingia anophelis NUHP3 s 4 2
Paenibacillus sp. Aloe-11 s 4 2
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 s 4 2
Borrelia burgdorferi CA8 s 4 2
Pseudonocardia sp. P2 s 4 2
Arthrobacter sp. TB 26 s 4 2
Dickeya zeae ZJU1202 s 4 2
Mycobacterium tuberculosis 2100HD s 4 2
Marinomonas sp. MWYL1 s 4 2
Borreliella bavariensis PBi s 4 2
Clostridium tetani E88 s 4 2
Borrelia garinii BgVir s 4 2
Borrelia burgdorferi ZS7 s 4 2
Borrelia duttonii Ly s 4 2
Borrelia recurrentis A1 s 4 2
Nocardia brasiliensis ATCC 700358 p 4 2
Borrelia garinii NMJW1 s 4 2
Borrelia miyamotoi LB-2001 s 4 2
Borrelia burgdorferi N40 s 4 2
Borrelia burgdorferi JD1 s 4 2
Borreliella bissettii DN127 s 4 2
Borrelia afzelii PKo s 4 2
Borrelia afzelii PKo s 4 2
Borrelia hermsii DAH s 4 2
Eubacterium sulci ATCC 35585 s 4 2
Lentzea albidocapillata s 4 2
Borreliella garinii s 4 2
Eubacterium sp. AB3007 s 4 2
Clostridium tetani s 4 2
Lactonifactor longoviformis DSM 17459 s 4 2
Clostridium grantii DSM 8605 s 4 2
Paenibacillus polymyxa s 4 2
Rhizobium tropici s 4 2
Pseudomonas brassicacearum s 4 2
Escherichia coli s 4 2
Escherichia coli s 4 2
Escherichia coli s 4 2
Butyrivibrio sp. AE2032 s 4 2
Blautia schinkii DSM 10518 s 4 2
Lachnospiraceae bacterium AC2029 s 4 2
Tissierellia bacterium S5-A11 s 4 2
Clostridium lundense DSM 17049 s 4 2
Clostridium tetani s 4 2
Clostridium tetani ATCC 9441 s 4 2
Clostridium tetani s 4 2
Clostridium tetani s 4 2
Borrelia afzelii K78 s 4 2
Borreliella burgdorferi s 4 2
Clostridium tetani s 4 2
Clostridium tetani s 4 2
Pseudomonas aeruginosa s 4 2
Clostridium tyrobutyricum s 4 2
Clostridium tyrobutyricum s 4 2
Escherichia coli s 4 2
Paenibacillus polymyxa s 4 2
Borrelia miyamotoi s 4 2
Pseudomonas fluorescens s 4 2
Clostridium tetani s 4 2
Borreliella burgdorferi s 4 2
Borreliella burgdorferi s 4 2
Paenibacillus polymyxa s 4 2
Salmonella enterica s 4 2
Pseudomonas fluorescens s 4 2
Pseudomonas fluorescens s 4 2
Pseudomonas chlororaphis s 4 2
Clostridium tetani ATCC 454 s 4 2
Eubacterium sulci ATCC 35585 s 4 2
Pseudomonas syringae s 4 2
Paenibacillus jilunlii s 4 2
Pseudomonas fluorescens s 4 2
Pseudomonas fluorescens s 4 2
Oxobacter pfennigii s 4 2
Pseudomonas fluorescens s 4 2
Staphylococcus haemolyticus s 4 2
Streptococcus oralis s 4 2
Kocuria palustris s 4 2
Clostridium tyrobutyricum s 4 2
Escherichia coli s 4 2
Borrelia miyamotoi s 4 2
Elizabethkingia anophelis s 4 2
Chlamydia psittaci s 4 2
Paenibacillus polymyxa s 4 2
Elizabethkingia anophelis s 4 2
Elizabethkingia anophelis s 4 2
Elizabethkingia anophelis s 4 2
Borrelia mayonii s 4 2
Borrelia mayonii s 4 2
Paenibacillus polymyxa s 4 2
Enterococcus faecium s 4 2
Escherichia coli s 4 2
Paenibacillus jilunlii s 4 2
Elizabethkingia anophelis s 4 2
Elizabethkingia anophelis s 4 2
Elizabethkingia anophelis s 4 2
Paenibacillus kribbensis s 4 2
Asanoa hainanensis s 4 2
Pseudomonas fluorescens s 4 2
Lentzea albidocapillata s 4 2
Escherichia coli s 4 2
Pseudomonas koreensis s 4 2
Pseudomonas fluorescens s 4 2
Escherichia coli s 4 2
Borreliella afzelii s 4 2
Pseudomonas fluorescens s 4 2
Paenibacillus polymyxa s 4 2
Pasteurella multocida subsp. septica s 4 2
Streptomyces cacaoi subsp. cacaoi s 4 2
Amycolatopsis kentuckyensis s 4 2
Amycolatopsis lexingtonensis s 4 2
Lentzea kentuckyensis s 4 2
Borreliella burgdorferi s 4 2
Eggerthia catenaformis s 4 2
Borrelia burgdorferi B31 s 4 2

*p=pathogen;s=symbiont