Metamenu

Genomes encoding eukaryotic-like proteins

PF01807 CHC2 zinc finger

Copy number in non-pathogens:
Mean=1.12 Stddev=0.53

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 6
Prevotella oris DSM 18711 = JCM 12252 s 7 5
Prevotella maculosa DSM 19339 = JCM 15638 s 7 5
Prevotella histicola JCM 15637 = DNF00424 s 5 4
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 7 5
Prevotella marshii DSM 16973 = JCM 13450 s 5 4
Bacteroides gallinarum DSM 18171 = JCM 13658 s 5 4
Bacteroides barnesiae DSM 18169 = JCM 13652 s 9 6
Prevotella intermedia s 7 5
Pectobacterium atrosepticum SCRI1043 s 7 5
Bacteroides fragilis NCTC 9343 s 5 4
Erwinia pyrifoliae Ep1/96 s 11 7
Photorhabdus asymbiotica s 5 4
Erwinia pyrifoliae DSM 12163 s 12 8
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 11 7
Alistipes senegalensis JC50 s 5 4
Xanthomonas albilineans GPE PC73 s 5 4
Photorhabdus luminescens subsp. laumondii TTO1 s 12 8
Alistipes shahii WAL 8301 s 9 6
Bacteroides xylanisolvens SD CC 1b s 5 4
Mucinivorans hirudinis s 9 6
Bacteroides fragilis s 5 4
Bacteroides fragilis s 5 4
Parabacteroides distasonis s 5 4
Bacteroides thetaiotaomicron s 11 7
Porphyromonas gingivalis s 5 4
Porphyromonas gingivalis s 5 4
[Ruminococcus] torques s 5 4
Faecalibacterium prausnitzii s 7 5
Parabacteroides distasonis s 7 5
Roseburia inulinivorans s 5 4
Bacteroides vulgatus s 14 9
Bacteroides thetaiotaomicron s 5 4
Blautia obeum s 5 4
[Clostridium] clostridioforme s 5 4
Faecalicatena contorta s 5 4
Flavonifractor plautii s 18 11
Bacteroides vulgatus s 9 6
Bacteroides thetaiotaomicron s 9 6
Parabacteroides distasonis s 9 6
Faecalibacterium prausnitzii s 7 5
Bacteroides ovatus s 5 4
Bacteroides vulgatus s 7 5
Parabacteroides distasonis s 7 5
Blautia obeum s 11 7
Roseburia intestinalis s 7 5
[Eubacterium] rectale s 5 4
Faecalibacterium prausnitzii s 5 4
Blautia massiliensis s 7 5
Anaerotruncus colihominis DSM 17241 s 7 5
Dorea formicigenerans ATCC 27755 s 7 5
Bacteroides intestinalis DSM 17393 s 5 4
Bacteroides dorei DSM 17855 s 12 8
Bacteroides eggerthii DSM 20697 s 9 6
Tyzzerella nexilis DSM 1787 s 11 7
Prevotella buccalis ATCC 35310 s 5 4
Bacteroides xylanisolvens SD CC 1b s 5 4
Bacteroides vulgatus PC510 s 7 5
Bacteroides xylanisolvens SD CC 2a s 5 4
Bacteroides ovatus SD CMC 3f s 7 5
Bacteroides coprophilus DSM 18228 = JCM 13818 s 7 5
Blautia hansenii DSM 20583 s 5 4
Faecalibacterium prausnitzii A2-165 s 9 6
Parabacteroides johnsonii DSM 18315 s 7 5
Prevotella oris F0302 s 5 4
Prevotella veroralis F0319 s 11 7
Roseburia intestinalis L1-82 s 5 4
Roseburia inulinivorans DSM 16841 s 7 5
Subdoligranulum variabile DSM 15176 s 7 5
Ruminococcus albus 7 = DSM 20455 s 11 7
Prevotella disiens FB035-09AN s 11 7
Bacteroides sp. 3_1_13 s 9 6
Parabacteroides sp. D26 s 7 5
Clostridium orbiscindens 1_3_50AFAA s 7 5
[Clostridium] bolteae WAL-14578 s 5 4
Alistipes sp. HGB5 s 7 5
Prevotella marshii DSM 16973 = JCM 13450 s 5 4
Bacteroides fluxus YIT 12057 s 9 6
Prevotella multiformis DSM 16608 s 5 4
Prevotella dentalis DSM 3688 s 5 4
Prevotella pallens ATCC 700821 s 5 4
Parabacteroides merdae ATCC 43184 s 9 6
Pseudoflavonifractor capillosus ATCC 29799 s 7 5
Bacteroides uniformis ATCC 8492 s 5 4
Coprococcus eutactus ATCC 27759 s 5 4
[Clostridium] bolteae ATCC BAA-613 s 5 4
Ruminococcus gnavus ATCC 29149 s 5 4
Odoribacter splanchnicus DSM 20712 s 7 5
Bacteroides salanitronis DSM 18170 s 9 6
Prevotella sp. oral taxon 306 str. F0472 s 5 4
Prevotella sp. MSX73 s 5 4
Rhizobium sp. CF142 s 5 4
Prevotella nigrescens CC14M s 5 4
Lachnospiraceae bacterium A4 s 9 6
Lachnospiraceae bacterium 28-4 s 7 5
Lachnospiraceae bacterium M18-1 s 7 5
Lachnospiraceae bacterium A2 s 11 7
Anaerotruncus sp. G3(2012) s 7 5
Eubacterium plexicaudatum ASF492 s 7 5
Parabacteroides sp. ASF519 s 16 10
Leptospira interrogans serovar Szwajizak str. Szwajizak s 5 4
Prevotella dentalis DSM 3688 s 5 4
Faecalibacterium prausnitzii M21/2 s 14 9
Prevotella stercorea DSM 18206 s 5 4
Bacteroides fragilis str. J-143-4 s 5 4
Bacteroides fragilis str. I1345 s 7 5
Bacteroides fragilis str. A7 (UDC12-2) s 5 4
Bacteroides fragilis str. DS-208 s 5 4
Bacteroides fragilis str. 20793-3 s 9 6
Bacteroides fragilis str. 2-F-2 #4 s 11 7
Bacteroides fragilis str. 2-F-2 #7 s 11 7
Bacteroides fragilis str. 3988 T1 s 11 7
Bacteroides fragilis str. S23 R14 s 5 4
Bacteroides fragilis str. 1007-1-F #7 s 5 4
Bacteroides fragilis str. 1007-1-F #8 s 5 4
Bacteroides fragilis str. 1007-1-F #9 s 5 4
Bacteroides fragilis str. 1007-1-F #10 s 5 4
Bacteroides fragilis str. 3397 T14 s 7 5
Bacteroides fragilis str. 3397 N2 s 7 5
Bacteroides fragilis str. 3719 A10 s 12 8
Bacteroides fragilis str. 3774 T13 s 11 7
Bacteroides fragilis str. 2-F-2 #5 s 9 6
Bacteroides fragilis str. 3783N1-2 s 5 4
Bacteroides fragilis str. 3783N1-6 s 5 4
Bacteroides fragilis str. 3397 N3 s 7 5
Bacteroides fragilis str. 3719 T6 s 5 4
Bacteroides fragilis str. 3783N1-8 s 5 4
Bacteroides fragilis str. 3996 N(B) 6 s 11 7
Bacteroides fragilis str. 3998 T(B) 4 s 5 4
Bacteroides fragilis str. 3986 T(B)9 s 5 4
Bacteroides fragilis str. 3986T(B)10 s 5 4
Bacteroides fragilis str. 3976T8 s 11 7
Bacteroides fragilis str. 3986 T(B)13 s 5 4
Bacteroides fragilis str. 3986 N(B)22 s 5 4
Bacteroides fragilis str. 3988T(B)14 s 7 5
Bacteroides fragilis str. S6L3 s 5 4
Bacteroides fragilis str. S36L5 s 9 6
Bacteroides fragilis str. S36L11 s 9 6
Bacteroides fragilis str. S23L24 s 5 4
Bacteroides fragilis str. 34-F-2 #13 s 11 7
Bacteroides fragilis str. 1007-1-F #3 s 5 4
Bacteroides fragilis str. 1007-1-F #4 s 5 4
Bacteroides fragilis str. 3986 N(B)19 s 5 4
Bacteroides fragilis str. 3725 D9(v) s 9 6
Prevotella salivae F0493 s 9 6
Bacteroides fragilis str. 3998T(B)3 s 5 4
Bacteroides fragilis str. S36L12 s 9 6
Clostridium sp. M62/1 s 14 9
Clostridium perfringens E str. JGS1987 s 5 4
Leptospira weilii str. LNT 1234 s 5 4
Leptospira noguchii str. 1993005606 s 7 5
Prevotella pleuritidis F0068 s 5 4
Porphyromonas gingivalis F0568 s 7 5
Porphyromonas gingivalis F0570 s 5 4
Clostridium sp. ATCC BAA-442 s 7 5
Eubacterium ramulus ATCC 29099 s 5 4
Clostridium sp. ATCC 29733 s 5 4
Prevotella sp. HJM029 s 16 10
Prevotella oris DSM 18711 = JCM 12252 s 7 5
Prevotella maculosa DSM 19339 = JCM 15638 s 9 6
Blautia wexlerae DSM 19850 s 11 7
Blautia producta ATCC 27340 = DSM 2950 s 5 4
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 11 7
Parabacteroides gordonii DSM 23371 s 14 9
Bacteroides barnesiae DSM 18169 = JCM 13652 s 11 7
Riemerella columbina DSM 16469 s 5 4
Prevotella corporis DSM 18810 = JCM 8529 s 5 4
Prevotella veroralis DSM 19559 = JCM 6290 s 5 4
Bacteroides gallinarum DSM 18171 = JCM 13658 s 7 5
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 6
Blautia producta ATCC 27340 = DSM 2950 s 5 4
Bacteroides fragilis 3_1_12 s 9 6
Bacteroides sp. 1_1_6 s 11 7
Parabacteroides sp. 2_1_7 s 7 5
Bacteroides sp. 4_3_47FAA s 12 8
Bacteroides sp. 9_1_42FAA s 9 6
Bacteroides sp. D1 s 9 6
Bacteroides dorei 5_1_36/D4 s 16 10
Bacteroides sp. 2_1_22 s 9 6
Bacteroides sp. D20 s 7 5
Parabacteroides sp. D13 s 12 8
Prevotella buccae D17 s 7 5
Parabacteroides sp. 20_3 s 12 8
Bacteroides sp. 3_1_40A s 12 8
Bacteroides sp. 4_1_36 s 7 5
Erysipelotrichaceae bacterium 3_1_53 s 5 4
Lachnospiraceae bacterium 1_4_56FAA s 5 4
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 9 6
Lachnospiraceae bacterium 5_1_57FAA s 5 4
Lachnospiraceae bacterium 7_1_58FAA s 18 11
Clostridium sp. 7_3_54FAA s 7 5
Lachnospiraceae bacterium 8_1_57FAA s 5 4
Subdoligranulum sp. 4_3_54A2FAA s 12 8
Prevotella sp. oral taxon 299 str. F0039 s 5 4
Bacteroides sp. 3_1_19 s 7 5
Bacteroides sp. 1_1_30 s 11 7
Erysipelotrichaceae bacterium 2_2_44A s 5 4
Prevotella oris C735 s 5 4
Ruminococcaceae bacterium D16 s 5 4
Myroides odoratimimus CCUG 12901 s 5 4
Bacteroides caccae CL03T12C61 s 7 5
Bacteroides dorei CL03T12C01 s 7 5
Bacteroides fragilis CL05T12C13 s 9 6
Bacteroides fragilis CL07T00C01 s 9 6
Bacteroides fragilis CL07T12C05 s 9 6
Bacteroides ovatus CL02T12C04 s 11 7
Bacteroides ovatus CL03T12C18 s 7 5
Bacteroides uniformis CL03T00C23 s 7 5
Bacteroides uniformis CL03T12C37 s 7 5
Fusobacterium nucleatum subsp. animalis F0419 s 5 4
Parabacteroides distasonis CL03T12C09 s 5 4
Parabacteroides goldsteinii CL02T12C30 s 22 13
Parabacteroides johnsonii CL02T12C29 s 9 6
Parabacteroides merdae CL03T12C32 s 12 8
Parabacteroides merdae CL09T00C40 s 12 8
Prevotella maculosa OT 289 s 9 6
Bacteroides fragilis HMW 610 s 7 5
Bacteroides fragilis HMW 615 s 9 6
Porphyromonas gingivalis SJD2 s 7 5
Parabacteroides sp. D25 s 7 5
Prevotella nigrescens F0103 s 7 5
Bacteroides sp. HPS0048 s 7 5
[Clostridium] bolteae 90A9 s 7 5
[Clostridium] bolteae 90B3 s 7 5
[Clostridium] clostridioforme 90A6 s 7 5
[Clostridium] clostridioforme 90A7 s 5 4
[Clostridium] clostridioforme 90B1 s 11 7
[Clostridium] clostridioforme 90A3 s 5 4
[Clostridium] clostridioforme 90A8 s 11 7
[Clostridium] clostridioforme CM201 s 7 5
Fusobacterium nucleatum subsp. animalis F0419 s 5 4
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 6
Butyricicoccus pullicaecorum 1.2 s 5 4
Erwinia sp. Ejp617 s 12 8
Prevotella intermedia 17 s 7 5
Tannerella forsythia 92A2 s 5 4
Roseburia hominis A2-183 s 9 6
Bacteroides vulgatus ATCC 8482 s 9 6
Parabacteroides distasonis ATCC 8503 s 5 4
Bacteroides fragilis s 7 5
Bacteroides fragilis s 9 6
Ruminococcus sp. NK3A76 s 5 4
Prevotella sp. HUN102 s 11 7
Ruminococcus albus 7 = DSM 20455 s 11 7
[Clostridium] lactatifermentans DSM 14214 s 14 9
Lactonifactor longoviformis DSM 17459 s 5 4
Prevotella oulorum s 5 4
Butyricicoccus pullicaecorum DSM 23266 s 7 5
Photorhabdus asymbiotica subsp. australis DSM 17609 s 5 4
Blautia schinkii DSM 10518 s 5 4
Prevotella sp. S7-1-8 s 5 4
Bacteroides fragilis s 5 4
Intestinimonas butyriciproducens s 5 4
Bacteroides fragilis s 11 7
Leptospira weilii s 5 4
Stenotrophomonas maltophilia s 5 4
Bacteroides fragilis s 5 4
Bacteroides fragilis s 5 4
Bacteroides fragilis s 5 4
Bacteroides fragilis s 7 5
Bacteroides fragilis s 7 5
Bacteroides fragilis s 7 5
Escherichia coli s 5 4
Escherichia coli s 5 4
Ruthenibacterium lactatiformans s 7 5
Parabacteroides sp. HGS0025 s 16 10
Parabacteroides gordonii MS-1 s 14 9
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 12 8
Bacteroides fragilis s 7 5
Photorhabdus temperata subsp. thracensis s 11 7
Bacteroides dorei CL03T12C01 s 5 4
Bacteroides fragilis s 7 5
Bacteroides fragilis s 9 6
Bacteroides fragilis s 5 4
Bacteroides fragilis s 7 5
Prevotella corporis s 5 4
Prevotella bivia s 5 4
Prevotella bivia s 5 4
Bacteroides caecimuris s 9 6
Xylella fastidiosa s 5 4
Xylella fastidiosa s 5 4
Bacteroides fragilis s 5 4
Bacteroides fragilis s 5 4
Bacteroides vulgatus s 9 6
Ruthenibacterium lactatiformans s 5 4
Prevotella enoeca s 5 4
Prevotella amnii s 5 4
Flavobacterium columnare s 5 4
Bacteroides vulgatus s 5 4
Flavobacterium columnare s 11 7
Prevotella ruminicola s 7 5
Prevotella ruminicola s 7 5
Prevotella intermedia s 7 5
Bacteroides caecimuris s 9 6
Escherichia coli s 5 4
Bacteroides ovatus s 7 5
[Clostridium] clostridioforme s 5 4
[Clostridium] clostridioforme s 5 4
Chryseobacterium chaponense s 5 4
Eisenbergiella tayi s 11 7
Bacteroides fragilis s 5 4
Intestinimonas butyriciproducens s 5 4
Escherichia coli s 5 4
Bacteroides fragilis s 7 5
Bacteroides thetaiotaomicron s 7 5
Eisenbergiella tayi s 5 4
Flavobacterium columnare s 5 4
Bacteroides ovatus s 9 6
Bacteroides dorei s 7 5
Prevotella intermedia s 5 4
Bacteroides fragilis YCH46 s 5 4

*p=pathogen;s=symbiont