Genomes encoding eukaryotic-like proteins
PF02018 Carbohydrate binding domain
Copy number in non-pathogens:
Mean=0.45 Stddev=1.18
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Herbidospora cretacea | s | 4 | 6 |
| Ruminococcus champanellensis 18P13 = JCM 17042 | s | 6 | 8 |
| Paenibacillus sp. JDR-2 | s | 4 | 6 |
| Chthoniobacter flavus Ellin428 | s | 6 | 8 |
| Ruminococcus albus 7 = DSM 20455 | s | 12 | 15 |
| Didymococcus colitermitum TAV2 | s | 4 | 6 |
| Opitutaceae bacterium TAV1 | s | 4 | 6 |
| Ruminococcus albus 8 | s | 8 | 10 |
| Ruminiclostridium thermocellum JW20 | s | 5 | 7 |
| Ruminococcus flavefaciens FD-1 | s | 16 | 20 |
| Ruminococcus flavefaciens ATCC 19208 | s | 19 | 23 |
| Ruminococcus albus AD2013 | s | 13 | 17 |
| Ruminococcus flavefaciens AE3010 | s | 18 | 22 |
| Herbidospora cretacea | s | 4 | 6 |
| Ruminococcus albus 7 = DSM 20455 | s | 10 | 13 |
| Ruminococcus sp. HUN007 | s | 19 | 23 |
| Ruminococcus flavefaciens | s | 19 | 23 |
| Ruminococcus flavefaciens | s | 14 | 18 |
| Ruminococcus flavefaciens | s | 12 | 15 |
| Ruminococcus flavefaciens 007c | s | 14 | 18 |
| Ruminococcus flavefaciens | s | 12 | 15 |
| Ruminococcus flavefaciens | s | 17 | 21 |
| Paenibacillus odorifer | s | 4 | 6 |
*p=pathogen;s=symbiont
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