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Genomes encoding eukaryotic-like proteins

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PF02191 Olfactomedin-like domain

Copy number in non-pathogens:
Mean=0.00 Stddev=0.02

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Rhizobium leguminosarum bv. trifolii WSM1325 s 58 1
Rhizobium leguminosarum bv. trifolii SRDI565 s 58 1
Rhizobium leguminosarum bv. phaseoli 4292 s 58 1
Rhizobium leguminosarum bv. viciae WSM1481 s 58 1
Rhizobium leguminosarum bv. trifolii SRDI943 s 58 1
Rhizobium leguminosarum bv. viciae WSM1455 s 58 1
Faecalitalea cylindroides ATCC 27803 s 58 1
Rhizobium leguminosarum bv. viciae Vh3 s 58 1
Rhizobium leguminosarum bv. viciae Ps8 s 58 1
Rhizobium leguminosarum bv. trifolii TA1 s 58 1
Rhizobium leguminosarum bv. viciae Vc2 s 58 1
Rhizobium leguminosarum bv. viciae VF39 s 58 1
Rhizobium leguminosarum bv. viciae UPM1131 s 58 1
Rhizobium leguminosarum bv. viciae UPM1137 s 58 1
Rhizobium leguminosarum bv. phaseoli FA23 s 58 1
Rhizobium gallicum bv. gallicum R602sp s 58 1
Rhizobium leguminosarum bv. trifolii CC278f s 58 1
Rhizobium leguminosarum bv. trifolii CC283b s 58 1
Rhizobium tropici s 58 1

*p=pathogen;s=symbiont

Release announcements

News

  • EffectiveDB genome mode fixed

    24.11.20
  • EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31

    20.08.17
  • EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29

    24.06.16

Latest publications

  • EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
  • Prediction of microbial phenotypes based on comparative genomics.

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