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Genomes encoding eukaryotic-like proteins

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PF02450 Lecithin:cholesterol acyltransferase

Copy number in non-pathogens:
Mean=0.07 Stddev=0.29

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bradyrhizobium sp. STM 3809 s 6 2
Providencia stuartii ATCC 25827 s 6 2
Yersinia frederiksenii ATCC 33641 s 6 2
Oribacterium sp. oral taxon 078 str. F0262 s 13 4
Brevibacillus sp. BC25 s 6 2
Brevibacillus sp. CF112 s 6 2
Calothrix sp. PCC 7103 s 10 3
Candidatus Schmidhempelia bombi str. Bimp s 6 2
Providencia burhodogranariea DSM 19968 s 13 4
Providencia alcalifaciens Dmel2 s 6 2
Oribacterium sp. oral taxon 078 str. F0263 s 6 2
Brevibacillus brevis FJAT-0809-GLX s 6 2
Actinomyces europaeus ACS-120-V-Col10b s 6 2
Providencia alcalifaciens PAL-3 s 6 2
Providencia alcalifaciens R90-1475 s 6 2
Providencia alcalifaciens RIMD 1656011 s 10 3
Providencia alcalifaciens PAL-1 s 6 2
Tissierellia bacterium S7-1-4 s 10 3
Providencia stuartii s 6 2
Providencia stuartii s 6 2
Photorhabdus luminescens s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Bacillus cereus s 6 2
Moellerella wisconsensis ATCC 35017 s 6 2
Providencia stuartii s 6 2
Providencia stuartii s 6 2
Providencia stuartii s 6 2
Bacillus cereus s 6 2
Providencia stuartii s 6 2
Providencia stuartii s 6 2
Amycolatopsis pretoriensis s 6 2
Lentzea kentuckyensis s 6 2

*p=pathogen;s=symbiont

Release announcements

News

  • EffectiveDB genome mode fixed

    24.11.20
  • EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31

    20.08.17
  • EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29

    24.06.16

Latest publications

  • EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
  • Prediction of microbial phenotypes based on comparative genomics.

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