Metamenu

Genomes encoding eukaryotic-like proteins

PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

Copy number in non-pathogens:
Mean=5.35 Stddev=3.64

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Rhodococcus jostii NBRC 16295 s 4 21
Bradyrhizobium sp. STM 3843 s 5 25
Burkholderia sp. BT03 s 4 20
Amycolatopsis orientalis DSM 46075 s 4 21
Bradyrhizobium sp. WSM1253 s 4 20
Bradyrhizobium sp. WSM3983 s 4 21
Bradyrhizobium elkanii USDA 3259 s 4 20
Bradyrhizobium japonicum USDA 38 s 4 20
Bradyrhizobium sp. Tv2a-2 s 4 21
Bradyrhizobium sp. Ai1a-2 s 4 20
Bradyrhizobium sp. ARR65 s 6 29
Bradyrhizobium sp. Ec3.3 s 4 22
Bradyrhizobium elkanii WSM1741 s 4 20
Bradyrhizobium sp. Cp5.3 s 4 23
Bradyrhizobium elkanii USDA 3254 s 4 20
Bradyrhizobium elkanii WSM2783 s 5 24
Bradyrhizobium sp. USDA 3384 s 4 20
Bradyrhizobium sp. th.b2 s 4 21
Paraburkholderia xenovorans LB400 s 4 23
Actinomadura madurae LIID-AJ290 s 4 21
Amycolatopsis jejuensis s 7 31
Pseudonocardia acaciae DSM 45401 s 7 33
Paraburkholderia xenovorans LB400 s 4 23
Bradyrhizobium sp. OHSU_III s 4 20
Bradyrhizobium japonicum s 4 21
Bradyrhizobium elkanii s 4 20
Bradyrhizobium elkanii s 4 20
Bradyrhizobium elkanii s 4 20
Bradyrhizobium japonicum s 4 21
Achromobacter denitrificans s 4 21
Bradyrhizobium canariense s 4 20
Bradyrhizobium canariense s 4 20
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium japonicum s 5 25
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Achromobacter xylosoxidans s 4 20
Burkholderia sp. BT03 s 4 20
Amycolatopsis pretoriensis s 4 21

*p=pathogen;s=symbiont