Metamenu

Genomes encoding eukaryotic-like proteins

PF02838 Glycosyl hydrolase family 20, domain 2

Copy number in non-pathogens:
Mean=0.76 Stddev=1.54

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 6 11
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 4 8
Bacteroides barnesiae DSM 18169 = JCM 13652 s 4 7
Clostridium perfringens str. 13 s 4 7
Bacteroides fragilis NCTC 9343 s 7 13
Streptomyces sp. AW19M42 s 4 8
Alistipes timonensis JC136 s 4 8
Alistipes senegalensis JC50 s 6 10
Alistipes shahii WAL 8301 s 4 8
Bacteroides fragilis 638R s 7 13
Bacteroides xylanisolvens SD CC 1b s 4 7
Bacteroides xylanisolvens SD CC 2a s 4 8
Akkermansia muciniphila s 6 11
Bacteroides fragilis s 6 10
Bacteroides fragilis s 6 11
Bacteroides thetaiotaomicron s 7 13
Bacteroides thetaiotaomicron s 9 15
Bacteroides fragilis s 7 13
Parabacteroides distasonis s 4 7
Bacteroides thetaiotaomicron s 8 14
Clostridium perfringens s 4 7
[Ruminococcus] torques s 4 7
Bacteroides vulgatus s 7 13
Bacteroides thetaiotaomicron s 8 14
Bacteroides vulgatus s 7 12
Bacteroides thetaiotaomicron s 9 15
Bacteroides ovatus s 6 10
Bacteroides vulgatus s 6 11
Bacteroides thetaiotaomicron s 11 18
Clostridium septicum s 5 9
Bacteroides stercoris ATCC 43183 s 4 7
Bacteroides coprocola DSM 17136 s 4 7
Bacteroides plebeius DSM 17135 s 4 8
Bacteroides dorei DSM 17855 s 6 11
Sphingobacterium spiritivorum ATCC 33861 s 4 8
Prevotella timonensis CRIS 5C-B1 s 4 7
Bacteroides xylanisolvens SD CC 1b s 4 8
Bacteroides vulgatus PC510 s 6 11
Bacteroides xylanisolvens SD CC 2a s 4 8
Bacteroides ovatus SD CMC 3f s 6 11
Bacteroides coprophilus DSM 18228 = JCM 13818 s 7 13
Parabacteroides johnsonii DSM 18315 s 5 9
Bacteroides sp. 3_1_13 s 5 9
Alistipes sp. HGB5 s 6 10
Akkermansia muciniphila ATCC BAA-835 s 6 11
Bacteroides helcogenes P 36-108 s 6 10
Bacteroides fluxus YIT 12057 s 5 9
Flectobacillus major DSM 103 s 4 7
Bacteroides caccae ATCC 43185 s 7 13
Parabacteroides merdae ATCC 43184 s 6 11
Bacteroides ovatus ATCC 8483 s 6 11
[Clostridium] spiroforme DSM 1552 s 7 12
Parabacteroides sp. ASF519 s 11 19
Alistipes finegoldii DSM 17242 s 6 11
Prevotella nanceiensis DSM 19126 = JCM 15639 s 4 7
Capnocytophaga cynodegmi DSM 19736 s 4 7
Prevotella multisaccharivorax DSM 17128 s 6 10
Bacteroides fragilis str. J-143-4 s 7 12
Bacteroides fragilis str. I1345 s 7 12
Bacteroides fragilis str. J38-1 s 7 12
Bacteroides fragilis str. A7 (UDC12-2) s 7 13
Bacteroides fragilis str. Ds-233 s 7 12
Bacteroides fragilis str. DS-208 s 7 13
Bacteroides fragilis str. DS-71 s 7 13
Bacteroides fragilis str. DS-166 s 8 14
Bacteroides fragilis str. 20793-3 s 7 13
Bacteroides fragilis str. 2-F-2 #4 s 7 13
Bacteroides fragilis str. 2-F-2 #7 s 7 13
Bacteroides fragilis str. 3988 T1 s 7 12
Bacteroides fragilis str. S13 L11 s 7 12
Bacteroides fragilis str. S23 R14 s 7 12
Bacteroides fragilis str. 1007-1-F #7 s 7 12
Bacteroides fragilis str. 1007-1-F #8 s 7 12
Bacteroides fragilis str. 1007-1-F #9 s 7 12
Bacteroides fragilis str. 1009-4-F #7 s 7 13
Bacteroides fragilis str. 1007-1-F #10 s 7 12
Bacteroides fragilis str. 1009-4-F #10 s 7 13
Bacteroides fragilis str. 3397 T14 s 7 13
Bacteroides fragilis str. 3397 N2 s 7 13
Bacteroides fragilis str. 3719 A10 s 7 12
Bacteroides fragilis str. 3774 T13 s 7 12
Bacteroides fragilis str. 2-F-2 #5 s 7 13
Bacteroides fragilis str. 3783N1-2 s 7 12
Bacteroides fragilis str. 3783N1-6 s 7 12
Bacteroides fragilis str. 3397 N3 s 7 13
Bacteroides fragilis str. 3719 T6 s 7 12
Bacteroides fragilis str. 3783N1-8 s 7 12
Bacteroides fragilis str. 3996 N(B) 6 s 7 12
Bacteroides fragilis str. 3783N2-1 s 7 12
Bacteroides fragilis str. 3998 T(B) 4 s 7 12
Bacteroides fragilis str. 3986 T(B)9 s 7 12
Bacteroides fragilis str. 3976T7 s 7 12
Bacteroides fragilis str. 3986T(B)10 s 7 12
Bacteroides fragilis str. 3976T8 s 7 12
Bacteroides fragilis str. 3986 T(B)13 s 7 12
Bacteroides fragilis str. 3986 N(B)22 s 7 12
Bacteroides fragilis str. 3988T(B)14 s 7 12
Bacteroides fragilis str. S6L3 s 7 13
Bacteroides fragilis str. S6L8 s 7 13
Bacteroides fragilis str. S6R5 s 7 13
Bacteroides fragilis str. S6R6 s 7 13
Bacteroides fragilis str. S24L15 s 7 13
Bacteroides fragilis str. S24L26 s 7 13
Bacteroides fragilis str. S24L34 s 7 13
Bacteroides fragilis str. S36L5 s 7 13
Bacteroides fragilis str. S36L11 s 7 13
Bacteroides fragilis str. S23L24 s 7 12
Bacteroides fragilis str. S38L3 s 7 12
Bacteroides fragilis str. S38L5 s 7 12
Bacteroides fragilis str. 3-F-2 #6 s 7 12
Bacteroides fragilis str. 34-F-2 #13 s 8 14
Bacteroides fragilis str. 1007-1-F #3 s 7 12
Bacteroides fragilis str. 1007-1-F #4 s 7 12
Bacteroides fragilis str. 3986 N(B)19 s 7 12
Bacteroides fragilis str. 3725 D9(v) s 7 12
Bacteroides fragilis str. 3998T(B)3 s 7 12
Bacteroides fragilis str. S36L12 s 7 13
Clostridium perfringens CPE str. F4969 s 4 8
Clostridium perfringens D str. JGS1721 s 4 7
Clostridium perfringens B str. ATCC 3626 s 4 7
Clostridium celatum DSM 1785 s 4 7
Prevotella sp. oral taxon 473 str. F0040 s 5 9
Arenibacter certesii DSM 19833 s 4 7
Parabacteroides gordonii DSM 23371 s 12 20
Bacteroides barnesiae DSM 18169 = JCM 13652 s 7 12
Rikenella microfusus DSM 15922 s 6 11
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 15
Echinicola pacifica DSM 19836 s 4 7
Bacteroides fragilis 3_1_12 s 7 13
Bacteroides sp. 1_1_6 s 10 17
Parabacteroides sp. 2_1_7 s 4 8
Bacteroides sp. 2_2_4 s 5 9
Bacteroides sp. 3_2_5 s 7 12
Bacteroides sp. 4_3_47FAA s 7 12
Bacteroides sp. 9_1_42FAA s 6 11
Bacteroides sp. D1 s 5 9
Bacteroides sp. D2 s 7 12
Bacteroides dorei 5_1_36/D4 s 5 9
Bacteroides sp. 2_1_16 s 7 12
Bacteroides sp. 2_1_22 s 5 9
Bacteroides sp. 3_1_33FAA s 6 10
Bacteroides sp. 3_1_23 s 6 10
Bacteroides sp. 3_1_40A s 6 11
Coprobacillus sp. 8_2_54BFAA s 5 9
Bacteroides ovatus 3_8_47FAA s 6 10
Coprobacillus sp. 3_3_56FAA s 5 9
Lachnospiraceae bacterium 3_1_46FAA s 4 7
Lachnospiraceae bacterium 8_1_57FAA s 4 7
Bacteroides sp. 3_1_19 s 4 8
Bacteroides sp. D22 s 7 13
Bacteroides sp. 1_1_30 s 6 10
Bacteroides oleiciplenus YIT 12058 s 5 9
Clostridium perfringens WAL-14572 s 4 7
Odoribacter laneus YIT 12061 s 4 7
Bacteroides caccae CL03T12C61 s 6 10
Bacteroides dorei CL02T00C15 s 6 10
Bacteroides dorei CL02T12C06 s 6 10
Bacteroides dorei CL03T12C01 s 6 10
Bacteroides fragilis CL03T00C08 s 6 11
Bacteroides fragilis CL03T12C07 s 6 11
Bacteroides fragilis CL05T12C13 s 7 13
Bacteroides fragilis CL07T00C01 s 8 14
Bacteroides fragilis CL07T12C05 s 8 14
Bacteroides nordii CL02T12C05 s 6 11
Bacteroides ovatus CL02T12C04 s 9 16
Bacteroides ovatus CL03T12C18 s 6 10
Bacteroides salyersiae CL02T12C01 s 7 12
Bacteroides vulgatus CL09T03C04 s 6 11
Bacteroides xylanisolvens CL03T12C04 s 7 13
Parabacteroides distasonis CL03T12C09 s 4 7
Parabacteroides goldsteinii CL02T12C30 s 10 17
Parabacteroides johnsonii CL02T12C29 s 6 10
Parabacteroides merdae CL03T12C32 s 7 12
Parabacteroides merdae CL09T00C40 s 7 12
Bacteroides fragilis HMW 610 s 8 14
Bacteroides fragilis HMW 615 s 7 12
Bacteroides fragilis HMW 616 s 7 13
Bacteroides faecis MAJ27 s 7 12
Coprobacillus sp. D7 s 4 7
Parabacteroides sp. D25 s 4 8
Barnesiella intestinihominis YIT 11860 s 6 11
Bacteroides sp. HPS0048 s 6 11
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 6 11
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 15
Bacteroides vulgatus ATCC 8482 s 6 10
Parabacteroides distasonis ATCC 8503 s 4 7
Bacteroides fragilis s 8 14
Bacteroides fragilis s 9 15
Bacteroides fragilis s 7 13
[Clostridium] saccharogumia DSM 17460 s 6 10
Barnesiella viscericola DSM 18177 s 4 7
Bacteroides fragilis s 7 12
Bacteroides fragilis s 7 13
Bacteroides fragilis s 8 14
Bacteroides thetaiotaomicron s 7 13
Sphingobacterium sp. ML3W s 4 7
Clostridium perfringens s 4 7
Bacteroides thetaiotaomicron s 8 14
Bacteroides fragilis s 7 13
Bacteroides fragilis s 7 13
Bacteroides fragilis s 7 13
Bacteroides fragilis s 7 12
Bacteroides fragilis s 7 12
Bacteroides fragilis s 4 7
Flaviramulus ichthyoenteri Th78 s 4 7
Clostridium perfringens s 5 9
Parabacteroides sp. HGS0025 s 11 18
Parabacteroides gordonii MS-1 s 12 20
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 9 15
Bacteroides fragilis s 7 13
Bacteroides ovatus s 9 16
Bacteroides dorei CL03T12C01 s 6 11
Bacteroides fragilis s 7 12
Bacteroides fragilis s 7 13
Bacteroides fragilis s 7 12
Bacteroides fragilis s 7 12
Clostridium perfringens s 4 8
Bacteroides ovatus s 6 11
Bacteroides thetaiotaomicron s 9 15
Akkermansia muciniphila s 7 12
Bacteroides fragilis s 7 13
Bacteroides fragilis s 7 12
Bacteroides fragilis s 7 13
Bacteroides ovatus s 6 10
Streptomyces silaceus s 5 9
Bacteroides vulgatus s 5 9
Bacteroides fragilis s 7 13
Bacteroides thetaiotaomicron s 8 14
Bacteroides vulgatus s 6 10
Bacteroides xylanisolvens s 7 13
Akkermansia sp. KLE1605 s 7 12
Akkermansia muciniphila s 7 12
Bacteroides ovatus s 6 10
Bacteroides ovatus s 7 13
Bacteroides xylanisolvens s 6 10
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 4 8
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Clostridium perfringens s 5 9
Bacteroides fragilis s 7 13
Alistipes timonensis JC136 s 4 8
Bacteroides ovatus s 6 11
Bacteroides faecis MAJ27 s 7 12
Bacteroides fragilis s 7 13
Bacteroides fragilis s 7 13
Bacteroides thetaiotaomicron s 9 15
Clostridium perfringens s 4 7
Bacteroides xylanisolvens s 7 12
Bacteroides xylanisolvens s 7 12
Bacteroides dorei s 5 9
Bacteroides ovatus s 6 10
Bacteroides dorei s 6 11
Akkermansia muciniphila s 6 11
Bacteroides fragilis YCH46 s 7 13
Bacteroides thetaiotaomicron VPI-5482 s 9 15

*p=pathogen;s=symbiont