Metamenu

Genomes encoding eukaryotic-like proteins

PF03988 Repeat of Unknown Function (DUF347)

Copy number in non-pathogens:
Mean=0.23 Stddev=0.62

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 4 3
Burkholderia cenocepacia J2315 s 4 3
Bradyrhizobium sp. STM 3843 s 4 3
Frankia alni ACN14a s 6 4
Mycobacterium cosmeticum s 4 3
Ralstonia pickettii 12D s 4 3
Methylobacterium populi BJ001 s 4 3
Frankia sp. DC12 s 4 3
Burkholderia cenocepacia BC7 s 4 3
Frankia symbiont of Datisca glomerata s 4 3
Frankia sp. CN3 s 4 3
Mycobacterium sp. JS623 s 10 7
Methylobacterium extorquens DSM 13060 s 4 3
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 4 3
Frankia discariae s 4 3
Frankia sp. EUN1f s 4 3
Ralstonia sp. AU12-08 s 4 3
Burkholderia sp. AU4i s 7 5
Mycobacterium sp. UM_RHS s 4 3
Aeromonas hydrophila 173 s 4 3
Ralstonia pickettii 12J s 4 3
Nostoc punctiforme PCC 73102 s 6 4
Pseudomonas corrugata CFBP 5454 s 6 4
Actinoplanes subtropicus s 12 8
Agrobacterium rhizogenes s 4 3
Agrobacterium rhizogenes s 4 3
Frankia sp. CpI1-S s 4 3
Frankia sp. CpI1-P s 4 3
Afipia sp. NBIMC_P1-C1 s 4 3
Afipia sp. NBIMC_P1-C2 s 4 3
Afipia sp. NBIMC_P1-C3 s 4 3
Bradyrhizobium sp. OHSU_III s 4 3
Burkholderia cepacia s 4 3
Aeromonas hydrophila s 4 3
Ralstonia solanacearum s 4 3
Bradyrhizobium elkanii s 6 4
Pseudomonas veronii s 6 4
Burkholderia vietnamiensis s 6 4
Burkholderia vietnamiensis s 6 4
Burkholderia vietnamiensis s 4 3
Pseudomonas corrugata s 4 3
Pseudomonas corrugata s 6 4
Pseudomonas corrugata s 6 4
Pseudomonas corrugata s 4 3
Pseudomonas corrugata s 6 4
Pseudomonas corrugata s 6 4
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Burkholderia cenocepacia s 4 3
Aeromonas hydrophila s 4 3
Aeromonas hydrophila s 4 3
Streptomyces rhizosphaericus s 9 6

*p=pathogen;s=symbiont