Metamenu

Genomes encoding eukaryotic-like proteins

PF05426 Alginate lyase

Copy number in non-pathogens:
Mean=0.33 Stddev=0.86

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides reticulotermitis JCM 10512 s 4 4
Streptomyces turgidiscabies s 5 5
Streptomyces acidiscabies s 4 4
Vibrio owensii LMG 25430 s 4 4
Kluyvera cryocrescens NBRC 102467 s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica subsp. palearctica Y11 s 4 4
Yersinia enterocolitica subsp. palearctica 647/5307 s 4 4
Yersinia enterocolitica subsp. palearctica 556/8265 s 4 4
Yersinia enterocolitica subsp. palearctica YO527 s 4 4
Yersinia enterocolitica IP 10393 s 4 4
Bacteroides xylanisolvens SD CC 2a s 4 4
Yersinia enterocolitica (type O:5,27) str. YE149/02 s 4 4
Yersinia enterocolitica (type O:3) str. YE12/03 s 4 4
Bacteroides ovatus s 10 9
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia aleksiciae s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Bacteroides intestinalis DSM 17393 s 4 4
Chthoniobacter flavus Ellin428 s 4 4
Yersinia kristensenii ATCC 33638 s 4 4
Bacteroides xylanisolvens SD CC 1b s 4 4
Bacteroides xylanisolvens SD CC 2a s 4 4
Bacteroides ovatus SD CMC 3f s 4 4
Bacteroides cellulosilyticus DSM 14838 s 5 5
Bacteroides clarus YIT 12056 s 4 4
Paraprevotella clara YIT 11840 s 10 9
Paraprevotella xylaniphila YIT 11841 s 11 10
Bacteroides ovatus ATCC 8483 s 11 10
Vibrio sp. HENC-03 s 4 4
Caulobacter sp. AP07 s 4 4
Didymococcus colitermitum TAV2 s 5 5
Opitutaceae bacterium TAV1 s 18 16
Yersinia enterocolitica subsp. palearctica YE-P1 s 4 4
Yersinia enterocolitica subsp. palearctica YE-P4 s 4 4
Yersinia enterocolitica subsp. palearctica YE-149 s 4 4
Yersinia enterocolitica subsp. palearctica YE-150 s 4 4
Yersinia enterocolitica subsp. palearctica PhRBD_Ye1 s 4 4
Streptomyces turgidiscabies Car8 s 5 5
Streptomyces ipomoeae 91-03 s 4 4
Bacteroides cellulosilyticus WH2 s 5 5
Bacteroides sp. 2_2_4 s 4 4
Bacteroides sp. D1 s 4 4
Bacteroides sp. D2 s 13 12
Bacteroides sp. 2_1_22 s 4 4
Bacteroides sp. 3_1_23 s 11 10
Bacteroides ovatus 3_8_47FAA s 6 6
Tannerella sp. 6_1_58FAA_CT1 s 4 4
Bacteroides sp. 1_1_30 s 7 7
Bacteroides oleiciplenus YIT 12058 s 5 5
Bacteroides cellulosilyticus CL02T12C19 s 5 5
Bacteroides nordii CL02T12C05 s 4 4
Bacteroides ovatus CL02T12C04 s 11 10
Bacteroides ovatus CL03T12C18 s 10 9
Bacteroides xylanisolvens CL03T12C04 s 4 4
Dickeya sp. NCPPB 3274 s 4 4
Dickeya dadantii NCPPB 3537 s 4 4
Coprobacter fastidiosus NSB1 s 4 4
Bacteroides sp. HPS0048 s 4 4
Yersinia enterocolitica subsp. palearctica 105.5R(r) s 4 4
Burkholderia cenocepacia s 5 5
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Streptomyces acidiscabies s 4 4
Yersinia enterocolitica s 4 4
Raoultella planticola s 4 4
Vibrio harveyi s 4 4
Vibrio harveyi s 4 4
Burkholderia ubonensis s 4 4
Burkholderia territorii s 4 4
Burkholderia territorii s 4 4
Burkholderia ubonensis s 4 4
Yersinia enterocolitica s 4 4
Bacteroides ovatus s 11 10
Burkholderia cepacia s 4 4
Vibrio alginolyticus s 4 4
Yersinia aleksiciae s 4 4
Bacteroides ovatus s 12 11
Bacteroides ovatus s 4 4
Vibrio harveyi s 4 4
Opitutaceae bacterium TSB47 s 5 5
Bacteroides xylanisolvens s 7 7
Buttiauxella noackiae ATCC 51607 s 4 4
Kluyvera georgiana ATCC 51603 s 4 4
Streptomyces acidiscabies s 4 4
Streptomyces acidiscabies s 4 4
Bacteroides ovatus s 10 9
Bacteroides ovatus s 14 13
Bacteroides xylanisolvens s 5 5
Bacteroides ovatus s 12 11
Bacteroides clarus YIT 12056 s 4 4
Paenibacillus odorifer s 4 4
Yersinia enterocolitica s 4 4
Yersinia enterocolitica s 4 4
Streptomyces scabiei s 4 4
Streptomyces scabiei s 5 5
Streptomyces scabiei s 4 4
Bacteroides xylanisolvens s 4 4
Bacteroides xylanisolvens s 4 4
Bacteroides ovatus s 10 9

*p=pathogen;s=symbiont