Metamenu

Genomes encoding eukaryotic-like proteins

PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain

Copy number in non-pathogens:
Mean=0.29 Stddev=0.99

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Streptomyces turgidiscabies s 6 7
Streptomyces acidiscabies s 4 5
Streptomyces acidiscabies s 4 5
Alistipes ihumii AP11 s 6 7
Bacteroides xylanisolvens SD CC 1b s 5 6
Bacteroides xylanisolvens SD CC 2a s 4 5
Bacteroides thetaiotaomicron s 4 5
Bacteroides thetaiotaomicron s 4 5
Bacteroides thetaiotaomicron s 6 7
Bacteroides thetaiotaomicron s 5 6
Faecalicatena contorta s 5 6
Bacteroides thetaiotaomicron s 5 6
Faecalibacterium prausnitzii s 9 10
Bacteroides ovatus s 6 7
Bacteroides thetaiotaomicron s 4 5
Bacteroides xylanisolvens SD CC 1b s 5 6
Bacteroides ovatus SD CMC 3f s 5 6
Bacteroides cellulosilyticus DSM 14838 s 6 7
[Clostridium] methylpentosum DSM 5476 s 28 29
Bacteroides sp. 3_1_13 s 8 9
Parabacteroides merdae ATCC 43184 s 4 5
Bacteroides ovatus ATCC 8483 s 5 6
Lachnospiraceae bacterium M18-1 s 13 14
Clostridium sp. ASF502 s 4 5
Parabacteroides sp. ASF519 s 4 5
Didymococcus colitermitum TAV2 s 5 6
Opitutaceae bacterium TAV1 s 6 7
Streptomyces turgidiscabies Car8 s 6 7
Clostridium sp. KLE 1755 s 8 9
Bacteroides cellulosilyticus WH2 s 5 6
Clostridiales bacterium NK3B98 s 6 7
Echinicola pacifica DSM 19836 s 8 9
Bacteroides sp. 1_1_6 s 4 5
Bacteroides sp. 2_2_4 s 5 6
Bacteroides sp. D1 s 5 6
Bacteroides sp. D2 s 8 9
Bacteroides sp. 2_1_22 s 5 6
Bacteroides sp. 3_1_23 s 5 6
Lachnospiraceae bacterium 1_4_56FAA s 4 5
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 11 12
Bacteroides ovatus 3_8_47FAA s 5 6
Bacteroides sp. 3_1_19 s 4 5
Bacteroides sp. D22 s 6 7
Bacteroides sp. 1_1_30 s 5 6
Bacteroides ovatus CL02T12C04 s 5 6
Bacteroides ovatus CL03T12C18 s 4 5
Bacteroides salyersiae CL02T12C01 s 4 5
Bacteroides xylanisolvens CL03T12C04 s 4 5
Parabacteroides goldsteinii CL02T12C30 s 4 5
Parabacteroides johnsonii CL02T12C29 s 4 5
Parabacteroides merdae CL09T00C40 s 4 5
Bacteroides faecis MAJ27 s 5 6
Hungatella hathewayi 12489931 s 4 5
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 4 5
Paenibacillus mucilaginosus 3016 s 6 7
Actinomadura madurae LIID-AJ290 s 8 9
Blautia schinkii DSM 10518 s 9 10
Bacteroides thetaiotaomicron s 4 5
Streptomyces scabiei s 5 6
Bacteroides thetaiotaomicron s 5 6
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 5 6
Streptomyces scabiei s 5 6
Bacteroides ovatus s 5 6
Bacteroides ovatus s 5 6
Bacteroides thetaiotaomicron s 4 5
Bacteroides ovatus s 5 6
Bacteroides thetaiotaomicron s 5 6
Streptomyces scabiei s 4 5
Streptomyces scabiei s 5 6
Streptomyces scabiei s 5 6
Streptomyces scabiei s 5 6
Streptomyces scabiei s 5 6
Streptomyces scabiei s 5 6
Streptomyces sp. 96-12 s 6 7
Opitutaceae bacterium TSB47 s 6 7
Bacteroides xylanisolvens s 4 5
Streptomyces acidiscabies s 4 5
Streptomyces acidiscabies s 4 5
Streptomyces acidiscabies s 4 5
Bacteroides ovatus s 4 5
Bacteroides ovatus s 4 5
Bacteroides xylanisolvens s 4 5
Bacteroides ovatus s 5 6
Bacteroides faecis MAJ27 s 5 6
Eisenbergiella tayi s 9 10
Eisenbergiella tayi s 10 11
Eisenbergiella tayi s 8 9
Eisenbergiella tayi s 9 10
Eisenbergiella tayi s 10 11
Eisenbergiella tayi s 9 10
Eisenbergiella tayi s 9 10
Bacteroides thetaiotaomicron s 4 5
Eisenbergiella tayi s 10 11
Plantibacter flavus s 4 5
Streptomyces scabiei s 5 6
Streptomyces scabiei s 5 6
Streptomyces scabiei s 6 7
Bacteroides ovatus s 5 6
Bacteroides thetaiotaomicron VPI-5482 s 4 5

*p=pathogen;s=symbiont