Metamenu

Genomes encoding eukaryotic-like proteins

PF13088 BNR repeat-like domain

Copy number in non-pathogens:
Mean=0.37 Stddev=1.13

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Verrucomicrobium sp. BvORR034 s 12 15
Verrucomicrobium sp. BvORR106 s 13 16
Bacteroides fragilis NCTC 9343 s 4 5
Bacteroides fragilis 638R s 4 5
Bacteroides fragilis s 4 5
Bacteroides vulgatus s 4 6
Bacteroides ovatus s 4 6
Chthoniobacter flavus Ellin428 s 7 9
Bacteroides ovatus ATCC 8483 s 4 5
Parabacteroides sp. ASF519 s 5 7
Didymococcus colitermitum TAV2 s 11 13
Rhodopirellula baltica SWK14 s 8 10
Cyclobacterium marinum DSM 745 s 12 15
Opitutaceae bacterium TAV1 s 9 11
Bacteroides fragilis str. A7 (UDC12-2) s 4 5
Bacteroides fragilis str. DS-71 s 4 5
Bacteroides fragilis str. DS-166 s 4 5
Bacteroides fragilis str. 1009-4-F #7 s 4 5
Bacteroides fragilis str. 1009-4-F #10 s 4 5
Bacteroides fragilis str. 3397 T14 s 4 5
Bacteroides fragilis str. 3397 N2 s 4 5
Bacteroides fragilis str. 3397 N3 s 4 5
Bacteroides fragilis str. S24L15 s 4 5
Bacteroides fragilis str. S24L26 s 4 5
Bacteroides fragilis str. S24L34 s 4 5
Endozoicomonas elysicola DSM 22380 s 4 5
Arenibacter certesii DSM 19833 s 10 12
Runella zeae DSM 19591 s 12 14
Echinicola pacifica DSM 19836 s 4 5
Bacteroides sp. 1_1_6 s 4 5
Bacteroides sp. 4_3_47FAA s 4 5
Bacteroides sp. 3_1_23 s 4 5
Bacteroides sp. 3_1_40A s 4 5
Lachnospiraceae bacterium 1_1_57FAA s 4 5
Bacteroides ovatus 3_8_47FAA s 4 5
Lachnospiraceae bacterium 8_1_57FAA s 4 5
Bacteroides sp. D22 s 5 7
Bacteroides ovatus CL02T12C04 s 4 5
Bacteroides ovatus CL03T12C18 s 4 6
Bacteroides salyersiae CL02T12C01 s 4 5
Bacteroides vulgatus CL09T03C04 s 4 5
Parabacteroides goldsteinii CL02T12C30 s 6 8
Bacteroides fragilis HMW 610 s 4 5
Sphingobacterium paucimobilis HER1398 s 5 7
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 4 6
Dyadobacter fermentans DSM 18053 s 4 5
Bacteroides fragilis s 4 5
Sphingobacterium thalpophilum DSM 11723 s 4 6
Arenibacter algicola s 8 10
Endozoicomonas elysicola s 4 5
Bacteroides fragilis s 4 5
Bacteroides fragilis s 4 5
Bacteroides fragilis s 4 5
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 4 5
Bacteroides fragilis s 4 5
Bacteroides ovatus s 4 5
Bacteroides ovatus s 4 5
Bacteroides fragilis s 4 5
Ruthenibacterium lactatiformans s 4 6
Opitutaceae bacterium TSB47 s 34 39
Bacteroides ovatus s 5 7
Bacteroides fragilis s 4 5
Bacteroides ovatus s 4 5
Bacteroides fragilis s 4 5
Bacteroides fragilis s 4 5
Bacteroides ovatus s 4 6
Bacteroides fragilis YCH46 s 4 5

*p=pathogen;s=symbiont