Metamenu

Genomes encoding eukaryotic-like proteins

PF13290 Chitobiase/beta-hexosaminidase C-terminal domain

Copy number in non-pathogens:
Mean=0.24 Stddev=0.69

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Paenibacillus pinihumi DSM 23905 = JCM 16419 s 5 4
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 9 7
Haloferula sp. BvORR071 s 18 13
Alistipes senegalensis JC50 s 5 4
Bacteroides thetaiotaomicron s 5 4
Elizabethkingia anophelis s 5 4
Chthoniobacter flavus Ellin428 s 9 7
Bacteroides coprophilus DSM 18228 = JCM 13818 s 5 4
[Clostridium] methylpentosum DSM 5476 s 8 6
Alistipes sp. HGB5 s 8 6
Bacteroides ovatus ATCC 8483 s 6 5
Parabacteroides sp. ASF519 s 8 6
Alistipes finegoldii DSM 17242 s 9 7
Parabacteroides gordonii DSM 23371 s 5 4
Rikenella microfusus DSM 15922 s 5 4
Ruminococcus gauvreauii DSM 19829 s 5 4
Echinicola pacifica DSM 19836 s 6 5
Tannerella sp. 6_1_58FAA_CT1 s 5 4
Bacteroides salyersiae CL02T12C01 s 11 8
Parabacteroides goldsteinii CL02T12C30 s 6 5
Bacteroides fragilis HMW 610 s 5 4
Bacteroides fragilis HMW 616 s 5 4
[Clostridium] termitidis CT1112 s 5 4
Bacteroides sp. HPS0048 s 6 5
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 11 8
Paenibacillus mucilaginosus 3016 s 6 5
Bacteroides fragilis s 5 4
[Clostridium] cellobioparum DSM 1351 = ATCC 15832 s 5 4
Butyrivibrio sp. MC2021 s 5 4
Prevotella brevis ATCC 19188 s 5 4
Elizabethkingia anophelis s 6 5
Paenibacillus odorifer s 5 4
Eubacterium limosum s 5 4
Parabacteroides sp. HGS0025 s 8 6
Parabacteroides gordonii MS-1 s 5 4
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 6 5
Bacteroides ovatus s 6 5
Bacteroides ovatus s 5 4
Bacteroides ovatus s 5 4
Elizabethkingia endophytica s 5 4
Elizabethkingia endophytica s 6 5
Bacteroides ovatus s 6 5
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 5 4
Paenibacillus odorifer s 6 5
Paenibacillus odorifer s 6 5
Paenibacillus odorifer s 5 4
Clostridiales bacterium s 5 4

*p=pathogen;s=symbiont