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Genomes encoding eukaryotic-like proteins

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PF13418 Galactose oxidase, central domain

Copy number in non-pathogens:
Mean=0.08 Stddev=0.80

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Leptospira weilii str. 2006001855 s 4 4
Leptospira weilii serovar Topaz str. LT2116 s 4 4
Leptospira weilii str. LNT 1194 s 4 4
Leptospira interrogans serovar Naam str. Naam s 4 4
Stigmatella aurantiaca DW4/3-1 s 11 9
Leptospira interrogans serovar Medanensis str. L0448 s 4 4
Leptospira interrogans str. FPW2026 s 4 4
Leptospira interrogans serovar Grippotyphosa str. UI 12764 s 4 4
Leptospira alexanderi serovar Manhao 3 str. L 60 s 4 4
Leptospira interrogans serovar Medanensis str. UT053 s 4 4
Leptospira weilii str. UI 13098 s 4 4
Burkholderia dolosa PC543 s 6 5
Stigmatella aurantiaca DW4/3-1 s 12 10
Leptospira weilii s 4 4
Leptospira weilii s 6 5
Leptospira weilii s 4 4
Leptospira weilii s 4 4
Leptospira weilii s 4 4
Leptospira weilii s 4 4
Leptospira weilii s 4 4
Leptospira interrogans s 4 4
Leptospira interrogans s 4 4
Burkholderia dolosa AU0158 s 4 4
Burkholderia cepacia s 4 4
Stigmatella aurantiaca s 11 9

*p=pathogen;s=symbiont

Release announcements

News

  • EffectiveDB genome mode fixed

    24.11.20
  • EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31

    20.08.17
  • EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29

    24.06.16

Latest publications

  • EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
  • Prediction of microbial phenotypes based on comparative genomics.

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