Genomes encoding eukaryotic-like proteins
PF13540 Regulator of chromosome condensation (RCC1) repeat
Copy number in non-pathogens:
Mean=0.17 Stddev=0.87
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Haloferula sp. BvORR071 | s | 8 | 8 |
Gorillibacterium massiliense | s | 5 | 5 |
Sphaerochaeta coccoides DSM 17374 | s | 30 | 27 |
Acidovorax sp. CF316 | s | 10 | 9 |
Bifidobacterium sp. 7101 | s | 4 | 4 |
Bifidobacterium sp. A11 | s | 4 | 4 |
Stigmatella aurantiaca DW4/3-1 | s | 6 | 6 |
Oxalobacter formigenes HOxBLS | s | 5 | 5 |
Oxalobacter formigenes OXCC13 | s | 6 | 6 |
Microbacterium sp. oral taxon 186 str. F0373 | s | 4 | 4 |
Salinispora pacifica CNT001 | s | 4 | 4 |
Salinispora arenicola CNR921 | s | 4 | 4 |
Salinispora pacifica CNS103 | s | 4 | 4 |
Paenibacillus mucilaginosus 3016 | s | 5 | 5 |
Stigmatella aurantiaca DW4/3-1 | s | 7 | 7 |
Bifidobacterium asteroides PRL2011 | s | 4 | 4 |
Bifidobacterium coryneforme | s | 6 | 6 |
Bifidobacterium asteroides | s | 7 | 7 |
Bifidobacterium coryneforme | s | 8 | 8 |
Burkholderia ubonensis | s | 4 | 4 |
Burkholderia ubonensis | s | 4 | 4 |
Burkholderia ubonensis | s | 4 | 4 |
Legionella birminghamensis | s | 4 | 4 |
Stigmatella aurantiaca | s | 14 | 13 |
Oxalobacter formigenes | s | 6 | 6 |
Oxalobacter formigenes OXCC13 | s | 6 | 6 |
*p=pathogen;s=symbiont