Metamenu

Genomes encoding eukaryotic-like proteins

PF13551 Winged helix-turn helix

Copy number in non-pathogens:
Mean=0.24 Stddev=0.76

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 12 10
Xanthomonas oryzae pv. oryzae MAFF 311018 s 11 9
Sinorhizobium fredii HH103 s 14 11
Streptococcus equi subsp. zooepidemicus s 6 5
Xenorhabdus nematophila F1 s 7 6
Xenorhabdus bovienii SS-2004 s 4 4
Gluconacetobacter diazotrophicus PA1 5 s 6 5
Photorhabdus luminescens subsp. laumondii TTO1 s 8 7
Xenorhabdus nematophila ATCC 19061 s 19 15
Treponema phagedenis s 12 10
Serratia symbiotica SCt-VLC s 39 30
Methylobacterium nodulans ORS 2060 s 6 5
Rhizobium leguminosarum bv. trifolii WSM2304 s 4 4
Enterococcus faecium EnGen0184 s 6 5
Treponema phagedenis 4A s 22 17
Mannheimia haemolytica USDA-ARS-USMARC-183 s 19 15
Mannheimia haemolytica USDA-ARS-USMARC-185 s 15 12
Mannheimia haemolytica D153 s 7 6
Mannheimia haemolytica D171 s 7 6
Mannheimia haemolytica D193 s 8 7
Mannheimia haemolytica MhSwine2000 s 6 5
Mannheimia haemolytica MhBrain2012 s 8 7
Ensifer sp. BR816 s 6 5
Methylobacterium sp. WSM2598 s 8 7
Microvirga lotononidis s 14 11
Mannheimia haemolytica USMARC_2286 s 18 14
Vibrio parahaemolyticus s 4 4
Vibrio albensis VL426 s 7 6
Photobacterium damselae subsp. damselae CIP 102761 s 4 4
Leptospira alexanderi serovar Manhao 3 str. L 60 s 15 12
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 7 6
Paraburkholderia mimosarum STM 3621 s 4 4
Burkholderia sp. WSM4176 s 4 4
Vibrio alginolyticus E0666 s 4 4
Ensifer aridi s 4 4
Xanthomonas oryzae pv. oryzae PXO99A s 15 12
Burkholderia glumae BGR1 s 8 7
Mannheimia haemolytica M42548 s 18 14
Mycobacterium smegmatis str. MC2 155 s 4 4
Rickettsia peacockii str. Rustic p 15 12
Sinorhizobium fredii USDA 257 s 7 6
Sinorhizobium sp. PC2 s 10 8
Burkholderia glumae LMG 2196 = ATCC 33617 s 12 10
Mycobacterium smegmatis str. MC2 155 s 4 4
Vibrio vulnificus s 4 4
Vibrio vulnificus s 4 4
Sinorhizobium meliloti s 4 4
Mannheimia haemolytica s 18 14
Mannheimia haemolytica s 18 14
Burkholderia ubonensis s 6 5
Burkholderia ubonensis s 8 7
Burkholderia vietnamiensis s 4 4
Burkholderia ubonensis s 8 7
Burkholderia ubonensis s 4 4
Burkholderia ubonensis s 11 9
Burkholderia ubonensis s 4 4
Burkholderia ubonensis s 7 6
Burkholderia ubonensis s 6 5
Burkholderia ubonensis s 10 8
Burkholderia ubonensis s 4 4
Burkholderia ubonensis s 4 4
Burkholderia ubonensis s 7 6
Burkholderia ubonensis s 4 4
Burkholderia ubonensis s 4 4
Burkholderia ubonensis s 6 5
Vibrio vulnificus CladeA-yb158 s 4 4
Xanthomonas oryzae pv. oryzae s 10 8
Mannheimia haemolytica s 4 4
Endozoicomonas atrinae s 4 4
Aeromonas schubertii s 6 5
Xanthomonas oryzae pv. oryzae s 14 11
Xanthomonas oryzae pv. oryzae s 14 11
Xanthomonas oryzae pv. oryzae s 11 9
Xanthomonas oryzae pv. oryzae s 14 11
Xanthomonas oryzae pv. oryzae s 16 13
Xanthomonas oryzae pv. oryzae s 11 9
Xanthomonas oryzae pv. oryzae s 11 9
Xanthomonas oryzae pv. oryzae s 11 9
Xanthomonas oryzae pv. oryzae s 11 9
Piscirickettsia salmonis s 4 4
Piscirickettsia salmonis s 4 4
Piscirickettsia salmonis s 6 5
Piscirickettsia salmonis s 6 5
Piscirickettsia salmonis s 8 7
Hymenobacter sp. PAMC 26628 s 6 5
Enterococcus faecium s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 6 5
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 8 7
Burkholderia cenocepacia s 7 6
Burkholderia cenocepacia s 6 5
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 6 5
Streptomyces acidiscabies s 4 4
Photobacterium damselae subsp. damselae s 4 4
Gilliamella apicola s 4 4
Ensifer shofinae s 4 4
Legionella pneumophila subsp. pneumophila s 4 4
Legionella pneumophila subsp. pneumophila s 4 4
Legionella pneumophila subsp. pneumophila s 4 4
Aeromonas caviae s 4 4
Burkholderia ubonensis s 6 5
Burkholderia ubonensis s 6 5
Burkholderia ubonensis s 7 6
Burkholderia ubonensis s 4 4
Vibrio alginolyticus s 4 4
blood disease bacterium A2-HR MARDI s 4 4
Photobacterium damselae subsp. damselae s 4 4
Sinorhizobium meliloti s 4 4
Mycobacterium smegmatis str. MC2 155 s 6 5
Sinorhizobium fredii NGR234 s 12 10

*p=pathogen;s=symbiont