Genomes encoding eukaryotic-like proteins

PF16335 Domain of unknown function (DUF4965)

Copy number in non-pathogens:
Mean=0.03 Stddev=0.20

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Prevotella oris DSM 18711 = JCM 12252 s 4 1
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 s 4 1
Prevotella maculosa DSM 19339 = JCM 15638 s 4 1
Bacteroides reticulotermitis JCM 10512 s 9 2
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 9 2
Prevotella nanceiensis DSM 19126 = JCM 15639 s 4 1
Haloferula sp. BvORR071 s 4 1
Phycisphaera mikurensis NBRC 102666 s 4 1
Bacteroides fragilis NCTC 9343 s 9 2
Alistipes senegalensis JC50 s 4 1
Bacteroides fragilis 638R s 9 2
Bacteroides xylanisolvens SD CC 1b s 4 1
Bacteroides xylanisolvens SD CC 2a s 4 1
Bacteroides fragilis s 4 1
Bacteroides thetaiotaomicron s 14 3
Parabacteroides distasonis s 4 1
Bacteroides thetaiotaomicron s 25 5
Bacteroides fragilis s 9 2
Parabacteroides distasonis s 4 1
Parabacteroides distasonis s 4 1
Bacteroides thetaiotaomicron s 19 4
Bacteroides thetaiotaomicron s 25 5
Bacteroides thetaiotaomicron s 25 5
Parabacteroides distasonis s 4 1
Bacteroides ovatus s 9 2
Bacteroides thetaiotaomicron s 19 4
Parabacteroides distasonis s 4 1
Paenibacillus phocaensis s 4 1
Bacteroides stercoris ATCC 43183 s 4 1
Bacteroides coprocola DSM 17136 s 4 1
Bacteroides intestinalis DSM 17393 s 9 2
Paenibacillus sp. JDR-2 s 4 1
Bacteroides xylanisolvens SD CC 1b s 4 1
Bacteroides xylanisolvens SD CC 2a s 4 1
Bacteroides ovatus SD CMC 3f s 19 4
Bacteroides cellulosilyticus DSM 14838 s 4 1
Hungatella hathewayi DSM 13479 s 4 1
Parabacteroides johnsonii DSM 18315 s 9 2
Prevotella oris F0302 s 4 1
Kutzneria sp. 744 s 9 2
Bacteroides sp. 3_1_13 s 19 4
Parabacteroides sp. D26 s 4 1
Paenibacillus sp. HGF5 s 4 1
Prevotella oralis ATCC 33269 s 14 3
Prevotella sp. oral taxon 472 str. F0295 s 4 1
Flectobacillus major DSM 103 s 4 1
Sphingomonas sp. PR090111-T3T-6A s 4 1
Parabacteroides merdae ATCC 43184 s 9 2
Bacteroides ovatus ATCC 8483 s 9 2
Bacteroides uniformis ATCC 8492 s 4 1
Enterococcus phoeniculicola ATCC BAA-412 s 4 1
Prevotella oralis CC98A s 14 3
Prevotella nanceiensis DSM 19126 = JCM 15639 s 4 1
Opitutaceae bacterium TAV1 s 4 1
Bacteroides fragilis str. J-143-4 s 9 2
Bacteroides fragilis str. I1345 s 9 2
Bacteroides fragilis str. J38-1 s 9 2
Bacteroides fragilis str. A7 (UDC12-2) s 9 2
Bacteroides fragilis str. Ds-233 s 9 2
Bacteroides fragilis str. DS-208 s 9 2
Bacteroides fragilis str. DS-71 s 9 2
Bacteroides fragilis str. DS-166 s 9 2
Bacteroides fragilis str. 20793-3 s 9 2
Bacteroides fragilis str. 2-F-2 #4 s 9 2
Bacteroides fragilis str. 2-F-2 #7 s 9 2
Bacteroides fragilis str. 3988 T1 s 4 1
Bacteroides fragilis str. S13 L11 s 9 2
Bacteroides fragilis str. S23 R14 s 9 2
Bacteroides fragilis str. 1007-1-F #7 s 9 2
Bacteroides fragilis str. 1007-1-F #8 s 9 2
Bacteroides fragilis str. 1007-1-F #9 s 9 2
Bacteroides fragilis str. 1009-4-F #7 s 9 2
Bacteroides fragilis str. 1007-1-F #10 s 9 2
Bacteroides fragilis str. 1009-4-F #10 s 9 2
Bacteroides fragilis str. 3397 T14 s 9 2
Bacteroides fragilis str. 3397 N2 s 9 2
Bacteroides fragilis str. 3719 A10 s 9 2
Bacteroides fragilis str. 3774 T13 s 9 2
Bacteroides fragilis str. 2-F-2 #5 s 9 2
Bacteroides fragilis str. 3783N1-2 s 9 2
Bacteroides fragilis str. 3783N1-6 s 9 2
Bacteroides fragilis str. 3397 N3 s 9 2
Bacteroides fragilis str. 3719 T6 s 9 2
Bacteroides fragilis str. 3783N1-8 s 9 2
Bacteroides fragilis str. 3996 N(B) 6 s 9 2
Bacteroides fragilis str. 3783N2-1 s 9 2
Bacteroides fragilis str. 3998 T(B) 4 s 9 2
Bacteroides fragilis str. 3986 T(B)9 s 9 2
Bacteroides fragilis str. 3976T7 s 9 2
Bacteroides fragilis str. 3986T(B)10 s 9 2
Bacteroides fragilis str. 3976T8 s 9 2
Bacteroides fragilis str. 3986 T(B)13 s 9 2
Bacteroides fragilis str. 3986 N(B)22 s 9 2
Bacteroides fragilis str. 3988T(B)14 s 9 2
Bacteroides fragilis str. S6L3 s 9 2
Bacteroides fragilis str. S6L8 s 9 2
Bacteroides fragilis str. S6R5 s 9 2
Bacteroides fragilis str. S6R6 s 9 2
Bacteroides fragilis str. S24L15 s 9 2
Bacteroides fragilis str. S24L26 s 9 2
Bacteroides fragilis str. S24L34 s 9 2
Bacteroides fragilis str. S36L5 s 9 2
Bacteroides fragilis str. S36L11 s 9 2
Bacteroides fragilis str. S23L24 s 9 2
Bacteroides fragilis str. S38L3 s 9 2
Bacteroides fragilis str. S38L5 s 9 2
Bacteroides fragilis str. 3-F-2 #6 s 14 3
Bacteroides fragilis str. 34-F-2 #13 s 9 2
Bacteroides fragilis str. 1007-1-F #3 s 9 2
Bacteroides fragilis str. 1007-1-F #4 s 9 2
Bacteroides fragilis str. 3986 N(B)19 s 9 2
Bacteroides fragilis str. 3725 D9(v) s 9 2
Bacteroides fragilis str. 3998T(B)3 s 9 2
Bacteroides fragilis str. S36L12 s 9 2
Clostridium sp. KLE 1755 s 4 1
Prevotella oris DSM 18711 = JCM 12252 s 4 1
Prevotella maculosa DSM 19339 = JCM 15638 s 4 1
Paenibacillus pinihumi DSM 23905 = JCM 16419 s 4 1
Parabacteroides gordonii DSM 23371 s 4 1
Runella zeae DSM 19591 s 4 1
Dysgonomonas capnocytophagoides DSM 22835 s 4 1
Cohnella thermotolerans DSM 17683 s 4 1
Dyadobacter beijingensis DSM 21582 s 4 1
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 s 4 1
Alistipes onderdonkii WAL 8169 = DSM 19147 s 4 1
Echinicola pacifica DSM 19836 s 4 1
Dysgonomonas mossii DSM 22836 s 4 1
Bacteroides fragilis 3_1_12 s 9 2
Bacteroides sp. 1_1_6 s 25 5
Parabacteroides sp. 2_1_7 s 4 1
Bacteroides sp. 2_2_4 s 9 2
Bacteroides sp. 3_2_5 s 9 2
Bacteroides sp. D1 s 4 1
Bacteroides sp. D2 s 14 3
Paenibacillus sp. oral taxon 786 str. D14 s 4 1
Bacteroides sp. 2_1_16 s 9 2
Bacteroides sp. 2_1_22 s 4 1
Bacteroides sp. 2_1_33B s 4 1
Bacteroides sp. D20 s 4 1
Parabacteroides sp. D13 s 4 1
Parabacteroides sp. 20_3 s 4 1
Bacteroides sp. 3_1_23 s 25 5
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 4 1
Bacteroides ovatus 3_8_47FAA s 9 2
Subdoligranulum sp. 4_3_54A2FAA s 4 1
Bacteroides sp. 3_1_19 s 4 1
Bacteroides sp. D22 s 9 2
Bacteroides sp. 1_1_30 s 4 1
Prevotella oris C735 s 4 1
Bacteroides oleiciplenus YIT 12058 s 4 1
Dysgonomonas gadei ATCC BAA-286 s 9 2
Dysgonomonas mossii DSM 22836 s 4 1
Bacteroides fragilis CL03T00C08 s 9 2
Bacteroides fragilis CL03T12C07 s 9 2
Bacteroides fragilis CL05T12C13 s 9 2
Bacteroides fragilis CL07T00C01 s 9 2
Bacteroides fragilis CL07T12C05 s 9 2
Bacteroides ovatus CL02T12C04 s 14 3
Bacteroides ovatus CL03T12C18 s 9 2
Bacteroides salyersiae CL02T12C01 s 9 2
Bacteroides xylanisolvens CL03T12C04 s 9 2
Parabacteroides distasonis CL03T12C09 s 4 1
Parabacteroides distasonis CL09T03C24 s 4 1
Parabacteroides johnsonii CL02T12C29 s 9 2
Parabacteroides merdae CL03T12C32 s 9 2
Parabacteroides merdae CL09T00C40 s 9 2
Bacteroides fragilis HMW 610 s 9 2
Bacteroides fragilis HMW 615 s 9 2
Bacteroides fragilis HMW 616 s 9 2
Bacteroides faecis MAJ27 s 25 5
Paenibacillus vortex V453 s 4 1
[Clostridium] termitidis CT1112 s 9 2
Prevotella sp. oral taxon 317 str. F0108 s 4 1
Parabacteroides sp. D25 s 4 1
Barnesiella intestinihominis YIT 11860 s 4 1
Bacteroides sp. HPS0048 s 4 1
Hungatella hathewayi 12489931 s 9 2
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 9 2
Enterococcus phoeniculicola ATCC BAA-412 s 4 1
Prevotella oralis HGA0225 s 14 3
Pedobacter borealis DSM 19626 s 9 2
Dyadobacter fermentans DSM 18053 s 4 1
Treponema azotonutricium ZAS-9 s 4 1
Prevotella ruminicola 23 s 4 1
Parabacteroides distasonis ATCC 8503 s 4 1
Amycolatopsis jejuensis s 4 1
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Sphingobacterium thalpophilum DSM 11723 s 4 1
[Clostridium] cellobioparum DSM 1351 = ATCC 15832 s 9 2
Prevotella brevis ATCC 19188 s 4 1
Prevotella sp. FD3004 s 4 1
Prevotella ruminicola s 4 1
Leeuwenhoekiella sp. MAR_2009_132 s 4 1
Prevotella sp. MA2016 s 4 1
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 s 4 1
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides thetaiotaomicron s 25 5
Sphingobacterium sp. ML3W s 4 1
Bacteroides thetaiotaomicron s 25 5
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Ruthenibacterium lactatiformans s 4 1
Parabacteroides sp. HGS0025 s 4 1
Parabacteroides gordonii MS-1 s 4 1
Bacteroides fragilis s 9 2
Bacteroides ovatus s 14 3
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides ovatus s 9 2
Bacteroides thetaiotaomicron s 19 4
Bacteroides caecimuris s 30 6
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides ovatus s 19 4
Bacteroides fragilis s 9 2
Ruthenibacterium lactatiformans s 4 1
Bacteroides thetaiotaomicron s 19 4
Paenibacillus glucanolyticus s 4 1
Paenibacillus glucanolyticus s 4 1
Opitutaceae bacterium TSB47 s 4 1
Hymenobacter sp. PAMC 26628 s 4 1
Bacteroides xylanisolvens s 9 2
Prevotella ruminicola s 4 1
Prevotella ruminicola s 4 1
Bacteroides caecimuris s 30 6
Ruminiclostridium sp. KB18 s 4 1
Bacteroides ovatus s 4 1
Bacteroides ovatus s 4 1
Bacteroides xylanisolvens s 9 2
Prevotella ruminicola s 9 2
Prevotella ruminicola s 4 1
Bacteroides fragilis s 9 2
Bacteroides ovatus s 14 3
Prevotella oralis s 14 3
Bacteroides faecis MAJ27 s 25 5
Eisenbergiella tayi s 4 1
Eisenbergiella tayi s 4 1
Eisenbergiella tayi s 4 1
Eisenbergiella tayi s 4 1
Eisenbergiella tayi s 4 1
Eisenbergiella tayi s 4 1
Eisenbergiella tayi s 4 1
Bacteroides fragilis s 9 2
Bacteroides fragilis s 9 2
Bacteroides thetaiotaomicron s 25 5
Paenibacillus glucanolyticus s 4 1
Eisenbergiella tayi s 4 1
Sphingobacterium sp. B29 s 9 2
Amycolatopsis kentuckyensis s 4 1
Amycolatopsis lexingtonensis s 4 1
Amycolatopsis pretoriensis s 4 1
Bacteroides xylanisolvens s 9 2
Bacteroides xylanisolvens s 19 4
Bacteroides ovatus s 9 2
Parabacteroides distasonis s 4 1
Odoribacter splanchnicus s 19 4
Odoribacter splanchnicus s 14 3
Bacteroides fragilis YCH46 s 9 2
Bacteroides thetaiotaomicron VPI-5482 s 19 4

*p=pathogen;s=symbiont