Metamenu

Genomes encoding eukaryotic-like proteins

PF16353 Domain of unknown function(DUF4981)

Copy number in non-pathogens:
Mean=0.36 Stddev=0.82

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Streptomyces scabiei s 4 4
Streptomyces turgidiscabies s 4 4
Streptomyces acidiscabies s 4 4
Bacteroides fragilis NCTC 9343 s 5 5
Enterobacter cloacae s 4 4
Klebsiella oxytoca s 4 4
Bacteroides fragilis 638R s 5 5
Bacteroides xylanisolvens SD CC 1b s 5 5
Bacteroides xylanisolvens SD CC 2a s 4 4
Bacteroides fragilis s 5 5
Bacteroides thetaiotaomicron s 4 4
Bacteroides thetaiotaomicron s 9 8
Bacteroides fragilis s 5 5
Bacteroides thetaiotaomicron s 9 8
Bacteroides vulgatus s 6 6
Bacteroides thetaiotaomicron s 6 6
Bacteroides vulgatus s 6 6
Bacteroides thetaiotaomicron s 9 8
Bacteroides ovatus s 5 5
Bacteroides vulgatus s 6 6
Bacteroides thetaiotaomicron s 8 7
Bacteroides stercoris ATCC 43183 s 4 4
Bacteroides intestinalis DSM 17393 s 8 7
Bacteroides plebeius DSM 17135 s 5 5
Bacteroides dorei DSM 17855 s 6 6
Prevotella melaninogenica ATCC 25845 s 4 4
Bacteroides xylanisolvens SD CC 1b s 5 5
Bacteroides vulgatus PC510 s 6 6
Bacteroides xylanisolvens SD CC 2a s 4 4
Bacteroides ovatus SD CMC 3f s 4 4
Bacteroides cellulosilyticus DSM 14838 s 15 13
Bacteroides coprophilus DSM 18228 = JCM 13818 s 5 5
Bacteroides finegoldii DSM 17565 s 4 4
Parabacteroides johnsonii DSM 18315 s 4 4
Bacteroides sp. 3_1_13 s 5 5
Bacteroides helcogenes P 36-108 s 4 4
Bacteroides caccae ATCC 43185 s 4 4
Parabacteroides merdae ATCC 43184 s 4 4
Bacteroides ovatus ATCC 8483 s 5 5
Bacteroides uniformis ATCC 8492 s 6 6
Flavobacterium sp. CF136 s 4 4
Parabacteroides sp. ASF519 s 4 4
Bacteroides fragilis str. J-143-4 s 5 5
Bacteroides fragilis str. I1345 s 5 5
Bacteroides fragilis str. J38-1 s 5 5
Bacteroides fragilis str. A7 (UDC12-2) s 5 5
Bacteroides fragilis str. Ds-233 s 5 5
Bacteroides fragilis str. DS-208 s 5 5
Bacteroides fragilis str. DS-71 s 5 5
Bacteroides fragilis str. DS-166 s 5 5
Bacteroides fragilis str. 20793-3 s 5 5
Bacteroides fragilis str. 2-F-2 #4 s 5 5
Bacteroides fragilis str. 2-F-2 #7 s 5 5
Bacteroides fragilis str. 3988 T1 s 5 5
Bacteroides fragilis str. S13 L11 s 5 5
Bacteroides fragilis str. S23 R14 s 5 5
Bacteroides fragilis str. 1007-1-F #7 s 5 5
Bacteroides fragilis str. 1007-1-F #8 s 5 5
Bacteroides fragilis str. 1007-1-F #9 s 5 5
Bacteroides fragilis str. 1009-4-F #7 s 5 5
Bacteroides fragilis str. 1007-1-F #10 s 5 5
Bacteroides fragilis str. 1009-4-F #10 s 5 5
Bacteroides fragilis str. 3397 T14 s 5 5
Bacteroides fragilis str. 3397 N2 s 5 5
Bacteroides fragilis str. 3719 A10 s 5 5
Bacteroides fragilis str. 3774 T13 s 5 5
Bacteroides fragilis str. 2-F-2 #5 s 5 5
Bacteroides fragilis str. 3783N1-2 s 5 5
Bacteroides fragilis str. 3783N1-6 s 5 5
Bacteroides fragilis str. 3397 N3 s 5 5
Bacteroides fragilis str. 3719 T6 s 5 5
Bacteroides fragilis str. 3783N1-8 s 5 5
Bacteroides fragilis str. 3996 N(B) 6 s 5 5
Bacteroides fragilis str. 3783N2-1 s 5 5
Bacteroides fragilis str. 3998 T(B) 4 s 5 5
Bacteroides fragilis str. 3986 T(B)9 s 5 5
Bacteroides fragilis str. 3976T7 s 5 5
Bacteroides fragilis str. 3986T(B)10 s 5 5
Bacteroides fragilis str. 3976T8 s 5 5
Bacteroides fragilis str. 3986 T(B)13 s 5 5
Bacteroides fragilis str. 3986 N(B)22 s 5 5
Bacteroides fragilis str. 3988T(B)14 s 5 5
Bacteroides fragilis str. S6L3 s 5 5
Bacteroides fragilis str. S6L8 s 5 5
Bacteroides fragilis str. S6R5 s 5 5
Bacteroides fragilis str. S6R6 s 5 5
Bacteroides fragilis str. S24L15 s 5 5
Bacteroides fragilis str. S24L26 s 5 5
Bacteroides fragilis str. S24L34 s 5 5
Bacteroides fragilis str. S36L5 s 5 5
Bacteroides fragilis str. S36L11 s 5 5
Bacteroides fragilis str. S23L24 s 5 5
Bacteroides fragilis str. S38L3 s 5 5
Bacteroides fragilis str. S38L5 s 5 5
Bacteroides fragilis str. 3-F-2 #6 s 5 5
Bacteroides fragilis str. 34-F-2 #13 s 4 4
Bacteroides fragilis str. 1007-1-F #3 s 5 5
Bacteroides fragilis str. 1007-1-F #4 s 5 5
Bacteroides fragilis str. 3986 N(B)19 s 4 4
Bacteroides fragilis str. 3725 D9(v) s 5 5
Bacteroides fragilis str. 3998T(B)3 s 5 5
Bacteroides fragilis str. S36L12 s 5 5
Clostridiales bacterium oral taxon 876 str. F0540 s 4 4
Bacteroides cellulosilyticus WH2 s 13 11
Parabacteroides gordonii DSM 23371 s 5 5
Bacteroides barnesiae DSM 18169 = JCM 13652 s 4 4
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 4 4
Bacteroides fragilis 3_1_12 s 5 5
Bacteroides sp. 1_1_6 s 8 7
Bacteroides sp. 2_2_4 s 4 4
Bacteroides sp. 3_2_5 s 5 5
Bacteroides sp. 4_3_47FAA s 6 6
Bacteroides sp. 9_1_42FAA s 6 6
Bacteroides sp. D1 s 5 5
Bacteroides sp. D2 s 5 5
Bacteroides dorei 5_1_36/D4 s 6 6
Bacteroides sp. 2_1_16 s 5 5
Bacteroides sp. 2_1_22 s 5 5
Bacteroides sp. 3_1_33FAA s 6 6
Bacteroides sp. D20 s 6 6
Bacteroides sp. 3_1_23 s 5 5
Bacteroides sp. 3_1_40A s 6 6
Bacteroides sp. 4_1_36 s 6 6
Bacteroides ovatus 3_8_47FAA s 6 6
Bacteroides sp. D22 s 4 4
Bacteroides sp. 1_1_30 s 4 4
Prevotella sp. C561 s 4 4
Lachnospiraceae bacterium 2_1_46FAA s 4 4
Bacteroides oleiciplenus YIT 12058 s 8 7
Dysgonomonas gadei ATCC BAA-286 s 6 6
Bacteroides caccae CL03T12C61 s 4 4
Bacteroides cellulosilyticus CL02T12C19 s 9 8
Bacteroides dorei CL02T00C15 s 6 6
Bacteroides dorei CL02T12C06 s 6 6
Bacteroides dorei CL03T12C01 s 6 6
Bacteroides fragilis CL03T00C08 s 5 5
Bacteroides fragilis CL03T12C07 s 5 5
Bacteroides fragilis CL05T12C13 s 5 5
Bacteroides fragilis CL07T00C01 s 5 5
Bacteroides fragilis CL07T12C05 s 5 5
Bacteroides nordii CL02T12C05 s 5 5
Bacteroides ovatus CL02T12C04 s 5 5
Bacteroides ovatus CL03T12C18 s 6 6
Bacteroides salyersiae CL02T12C01 s 8 7
Bacteroides uniformis CL03T00C23 s 8 7
Bacteroides uniformis CL03T12C37 s 8 7
Bacteroides vulgatus CL09T03C04 s 6 6
Bacteroides xylanisolvens CL03T12C04 s 6 6
Parabacteroides goldsteinii CL02T12C30 s 4 4
Parabacteroides johnsonii CL02T12C29 s 5 5
Parabacteroides merdae CL03T12C32 s 4 4
Bacteroides fragilis HMW 610 s 5 5
Bacteroides fragilis HMW 615 s 5 5
Bacteroides fragilis HMW 616 s 5 5
Bacteroides faecis MAJ27 s 6 6
Bacteroides sp. HPS0048 s 4 4
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 8 7
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 4 4
Bacteroides stercoris CC31F s 4 4
Prevotella sp. ICM33 s 4 4
Bacteroides vulgatus ATCC 8482 s 6 6
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 4 4
Klebsiella michiganensis s 4 4
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides thetaiotaomicron s 9 8
Streptomyces scabiei s 4 4
Klebsiella michiganensis s 4 4
Bacteroides thetaiotaomicron s 10 9
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Flaviramulus ichthyoenteri Th78 s 4 4
Parabacteroides sp. HGS0025 s 6 6
Parabacteroides gordonii MS-1 s 5 5
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 4 4
Bacteroides fragilis s 5 5
Streptomyces scabiei s 4 4
Streptomyces europaeiscabiei s 4 4
Bacteroides ovatus s 5 5
Bacteroides dorei CL03T12C01 s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides ovatus s 5 5
Bacteroides thetaiotaomicron s 8 7
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides ovatus s 5 5
Klebsiella oxytoca s 4 4
Bacteroides fragilis s 5 5
Bacteroides thetaiotaomicron s 9 8
Streptomyces scabiei s 4 4
Streptomyces scabiei s 4 4
Streptomyces scabiei s 4 4
Streptomyces scabiei s 4 4
Streptomyces scabiei s 4 4
Streptomyces europaeiscabiei s 4 4
Streptomyces europaeiscabiei s 4 4
Streptomyces sp. 96-12 s 4 4
Streptomyces scabiei s 4 4
Opitutaceae bacterium TSB47 s 4 4
Bacteroides vulgatus s 6 6
Bacteroides xylanisolvens s 5 5
Streptomyces acidiscabies s 4 4
Streptomyces acidiscabies s 4 4
Bacteroides ovatus s 6 6
Bacteroides ovatus s 6 6
Bacteroides xylanisolvens s 5 5
Bacteroides fragilis s 5 5
Bacteroides ovatus s 5 5
Bacteroides faecis MAJ27 s 6 6
Citrobacter freundii s 4 4
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Bacteroides thetaiotaomicron s 8 7
Vibrio splendidus s 4 4
Prevotella melaninogenica s 4 4
Streptomyces scabiei s 4 4
Bacteroides xylanisolvens s 5 5
Bacteroides xylanisolvens s 5 5
Bacteroides dorei s 6 6
Bacteroides ovatus s 6 6
Bacteroides dorei s 6 6
Citrobacter freundii s 4 4
Bacteroides fragilis YCH46 s 5 5
Bacteroides thetaiotaomicron VPI-5482 s 9 8

*p=pathogen;s=symbiont