Metamenu

Genomes encoding eukaryotic-like proteins

PF17132 alpha-L-rhamnosidase

Copy number in non-pathogens:
Mean=0.15 Stddev=0.65

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Alistipes ihumii AP11 s 7 5
Bacteroides thetaiotaomicron s 5 4
Bacteroides vulgatus s 4 3
Bacteroides thetaiotaomicron s 4 3
Bacteroides vulgatus s 4 3
Bacteroides thetaiotaomicron s 4 3
Faecalibacterium prausnitzii s 12 8
Bacteroides ovatus s 5 4
Bacteroides vulgatus s 5 4
Bacteroides thetaiotaomicron s 4 3
Bacteroides plebeius DSM 17135 s 7 5
Bacteroides dorei DSM 17855 s 8 6
Bacteroides vulgatus PC510 s 5 4
Bacteroides cellulosilyticus DSM 14838 s 5 4
Bacteroides finegoldii DSM 17565 s 4 3
[Clostridium] methylpentosum DSM 5476 s 61 40
Parabacteroides johnsonii DSM 18315 s 5 4
Bacteroides sp. 3_1_13 s 4 3
Bacteroides fluxus YIT 12057 s 5 4
Parabacteroides merdae ATCC 43184 s 4 3
Bacteroides ovatus ATCC 8483 s 5 4
Bacteroides salanitronis DSM 18170 s 4 3
Parabacteroides sp. ASF519 s 19 13
Clostridium sp. KLE 1755 s 13 9
Bacteroides cellulosilyticus WH2 s 8 6
Parabacteroides gordonii DSM 23371 s 4 3
Runella zeae DSM 19591 s 5 4
Bacteroides gallinarum DSM 18171 = JCM 13658 s 5 4
Alistipes onderdonkii WAL 8169 = DSM 19147 s 13 9
Echinicola pacifica DSM 19836 s 10 7
Bacteroides sp. 1_1_6 s 4 3
Bacteroides sp. 4_3_47FAA s 5 4
Bacteroides sp. 9_1_42FAA s 7 5
Bacteroides sp. D2 s 4 3
Bacteroides dorei 5_1_36/D4 s 7 5
Clostridium sp. D5 s 4 3
Bacteroides sp. 3_1_33FAA s 5 4
Bacteroides sp. 3_1_40A s 5 4
Lachnospiraceae bacterium 1_4_56FAA s 4 3
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 12 8
Bacteroides ovatus 3_8_47FAA s 7 5
Alistipes indistinctus YIT 12060 s 21 14
Bacteroides oleiciplenus YIT 12058 s 8 6
[Clostridium] citroniae WAL-17108 s 4 3
Sphingobium yanoikuyae ATCC 51230 s 4 3
Bacteroides cellulosilyticus CL02T12C19 s 4 3
Bacteroides dorei CL02T00C15 s 7 5
Bacteroides dorei CL02T12C06 s 7 5
Bacteroides dorei CL03T12C01 s 8 6
Bacteroides ovatus CL02T12C04 s 4 3
Bacteroides ovatus CL03T12C18 s 4 3
Bacteroides salyersiae CL02T12C01 s 4 3
Bacteroides vulgatus CL09T03C04 s 7 5
Parabacteroides goldsteinii CL02T12C30 s 13 9
Parabacteroides johnsonii CL02T12C29 s 10 7
Parabacteroides merdae CL03T12C32 s 4 3
Parabacteroides merdae CL09T00C40 s 4 3
Paenibacillus sp. Aloe-11 s 4 3
Streptomyces sp. HGB0020 s 4 3
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 4 3
Dyadobacter fermentans DSM 18053 s 5 4
Paenibacillus mucilaginosus 3016 s 4 3
Tannerella forsythia 92A2 s 4 3
Bacteroides vulgatus ATCC 8482 s 5 4
Actinomadura madurae LIID-AJ290 s 4 3
Blautia schinkii DSM 10518 s 4 3
Prevotella oryzae DSM 17970 s 4 3
Bacteroides thetaiotaomicron s 4 3
Bacteroides thetaiotaomicron s 4 3
Parabacteroides sp. HGS0025 s 5 4
Parabacteroides gordonii MS-1 s 4 3
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 8 6
Bacteroides ovatus s 4 3
Croceitalea dokdonensis DOKDO 023 s 4 3
Bacteroides dorei CL03T12C01 s 8 6
Bacteroides ovatus s 5 4
Bacteroides vulgatus s 4 3
Opitutaceae bacterium TSB47 s 27 18
Bacteroides vulgatus s 5 4
[Clostridium] stercorarium subsp. leptospartum DSM 9219 s 4 3
Bacteroides ovatus s 4 3
Bacteroides ovatus s 5 4
[Clostridium] citroniae s 4 3
Bacteroides ovatus s 5 4
Eisenbergiella tayi s 15 10
Eisenbergiella tayi s 12 8
Eisenbergiella tayi s 5 4
Eisenbergiella tayi s 8 6
Eisenbergiella tayi s 13 9
Eisenbergiella tayi s 12 8
Eisenbergiella tayi s 12 8
Bacteroides thetaiotaomicron s 4 3
Eisenbergiella tayi s 15 10
Bacteroides dorei s 7 5
Bacteroides ovatus s 5 4
Bacteroides dorei s 7 5
Bacteroides thetaiotaomicron VPI-5482 s 4 3

*p=pathogen;s=symbiont