Metamenu

Genomes encoding eukaryotic-like proteins

PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain

Copy number in non-pathogens:
Mean=0.41 Stddev=1.35

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides reticulotermitis JCM 10512 s 4 6
Streptomyces turgidiscabies s 5 8
Corynebacterium-like bacterium B27 s 4 6
Alistipes ihumii AP11 s 8 12
Bacteroides xylanisolvens SD CC 1b s 7 10
Bacteroides xylanisolvens SD CC 2a s 7 10
Bacteroides thetaiotaomicron s 6 9
Parabacteroides distasonis s 4 7
Bacteroides thetaiotaomicron s 4 6
Parabacteroides distasonis s 5 8
Parabacteroides distasonis s 6 9
Bacteroides thetaiotaomicron s 6 9
Bacteroides thetaiotaomicron s 6 9
Faecalicatena contorta s 4 6
Bacteroides thetaiotaomicron s 4 7
Parabacteroides distasonis s 5 8
Faecalibacterium prausnitzii s 12 17
Bacteroides ovatus s 6 9
Bacteroides thetaiotaomicron s 5 8
Parabacteroides distasonis s 7 10
Paenibacillus phocaensis s 4 6
Bacteroides intestinalis DSM 17393 s 4 6
Paenibacillus sp. JDR-2 s 4 7
Bacteroides xylanisolvens SD CC 1b s 7 10
Bacteroides xylanisolvens SD CC 2a s 6 9
Bacteroides ovatus SD CMC 3f s 5 8
Bacteroides cellulosilyticus DSM 14838 s 7 11
[Clostridium] methylpentosum DSM 5476 s 25 35
Parabacteroides johnsonii DSM 18315 s 5 8
Bacteroides sp. 3_1_13 s 8 12
Parabacteroides sp. D26 s 6 9
Flectobacillus major DSM 103 s 4 6
Parabacteroides merdae ATCC 43184 s 7 10
Bacteroides ovatus ATCC 8483 s 5 8
Lachnospiraceae bacterium M18-1 s 11 16
Clostridium sp. ASF502 s 4 6
Parabacteroides sp. ASF519 s 7 10
Didymococcus colitermitum TAV2 s 6 9
Opitutaceae bacterium TAV1 s 13 18
Streptomyces turgidiscabies Car8 s 5 8
Clostridium sp. KLE 1755 s 8 12
Bacteroides cellulosilyticus WH2 s 7 10
Parabacteroides gordonii DSM 23371 s 4 6
Clostridiales bacterium NK3B98 s 7 10
Echinicola pacifica DSM 19836 s 8 12
Bacteroides sp. 1_1_6 s 4 6
Parabacteroides sp. 2_1_7 s 5 8
Bacteroides sp. 2_2_4 s 5 8
Bacteroides sp. D1 s 7 10
Bacteroides sp. D2 s 8 12
Bacteroides sp. 2_1_22 s 7 10
Bacteroides sp. 2_1_33B s 7 11
Bacteroides sp. 3_1_33FAA s 4 6
Parabacteroides sp. D13 s 4 7
Parabacteroides sp. 20_3 s 7 10
Bacteroides sp. 3_1_23 s 5 8
Bacteroides sp. 3_1_40A s 4 6
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 14 20
Bacteroides ovatus 3_8_47FAA s 4 7
Bacteroides sp. 3_1_19 s 7 11
Bacteroides sp. D22 s 5 8
Bacteroides sp. 1_1_30 s 6 9
Alistipes indistinctus YIT 12060 s 7 10
Dysgonomonas gadei ATCC BAA-286 s 4 6
Bacteroides cellulosilyticus CL02T12C19 s 4 6
Bacteroides ovatus CL02T12C04 s 5 8
Bacteroides ovatus CL03T12C18 s 4 7
Bacteroides salyersiae CL02T12C01 s 5 8
Bacteroides xylanisolvens CL03T12C04 s 4 7
Parabacteroides distasonis CL03T12C09 s 4 7
Parabacteroides distasonis CL09T03C24 s 7 10
Parabacteroides goldsteinii CL02T12C30 s 7 11
Parabacteroides johnsonii CL02T12C29 s 6 9
Parabacteroides merdae CL03T12C32 s 6 9
Parabacteroides merdae CL09T00C40 s 7 10
Bacteroides faecis MAJ27 s 5 8
Parabacteroides sp. D25 s 5 8
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 5 8
Paenibacillus mucilaginosus 3016 s 6 9
Parabacteroides distasonis ATCC 8503 s 4 7
Actinomadura madurae LIID-AJ290 s 8 12
Sphingobacterium thalpophilum DSM 11723 s 4 6
Blautia schinkii DSM 10518 s 10 14
Bacteroides thetaiotaomicron s 4 7
Streptomyces scabiei s 4 7
Bacteroides thetaiotaomicron s 5 8
Parabacteroides gordonii MS-1 s 4 6
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 7 10
Streptomyces scabiei s 4 7
Bacteroides ovatus s 5 8
Bacteroides ovatus s 5 8
Bacteroides thetaiotaomicron s 4 6
Bacteroides ovatus s 4 7
Bacteroides thetaiotaomicron s 4 7
Streptomyces scabiei s 4 6
Streptomyces scabiei s 4 6
Streptomyces scabiei s 4 7
Streptomyces scabiei s 4 7
Streptomyces scabiei s 4 7
Streptomyces scabiei s 4 7
Streptomyces sp. 96-12 s 5 8
Opitutaceae bacterium TSB47 s 8 12
Bacteroides xylanisolvens s 4 7
Bacteroides ovatus s 5 8
Bacteroides ovatus s 5 8
Bacteroides xylanisolvens s 4 7
Asanoa hainanensis s 4 7
Bacteroides ovatus s 5 8
Bacteroides faecis MAJ27 s 5 8
Eisenbergiella tayi s 10 15
Eisenbergiella tayi s 10 15
Eisenbergiella tayi s 10 14
Eisenbergiella tayi s 10 15
Eisenbergiella tayi s 10 15
Eisenbergiella tayi s 10 14
Eisenbergiella tayi s 10 14
Bacteroides thetaiotaomicron s 4 6
Eisenbergiella tayi s 11 16
Streptomyces scabiei s 4 7
Streptomyces scabiei s 4 7
Streptomyces scabiei s 5 8
Bacteroides xylanisolvens s 4 7
Bacteroides xylanisolvens s 4 7
Bacteroides ovatus s 5 8
Parabacteroides distasonis s 7 10
Bacteroides thetaiotaomicron VPI-5482 s 4 6

*p=pathogen;s=symbiont