Metamenu

Effective results for Sulfobacillus acidophilus TPY (eggnog40)

Summary

Number of putative secreted proteins: 164
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 18 eukaryotic-like domains, contained in 164 proteins (0 high, 164 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1051632.TPY_0025(PF00665) (PF13276)(mitochondrial); (plastid)
1051632.TPY_0533(PF00665) (PF13276)(mitochondrial); (plastid)
1051632.TPY_0449(PF00665) (PF13276)(mitochondrial); (plastid)
1051632.TPY_3779(PF00665) (PF13276)(mitochondrial); (plastid)
1051632.TPY_2118(PF00665) (PF13276)(mitochondrial); (plastid)
1051632.TPY_2337(PF00665) (PF13276)(mitochondrial); plastid
1051632.TPY_2122(PF00665) (PF13276)(mitochondrial)
1051632.TPY_3127(PF01527) (PF00665) (PF13276)(ER)
1051632.TPY_1438(PF00665)mitochondrial
1051632.TPY_2239(PF01695)(mitochondrial)
1051632.TPY_1945(PF00665)(mitochondrial)
1051632.TPY_2972(PF01828)ER
1051632.TPY_0526(PF01695)(mitochondrial)
1051632.TPY_1589(PF02899)ER
1051632.TPY_3219(PF01828)ER
1051632.TPY_2633(PF01527) (PF13276)(ER)
1051632.TPY_2632(PF01527) (PF00665) (PF13276)
1051632.TPY_0094(PF02133)(mitochondrial)
1051632.TPY_2252(PF02371)ER; (ER)
1051632.TPY_0698(PF00665)mitochondrial; (mitochondrial)
1051632.TPY_2052(PF00665)(plastid)
1051632.TPY_1439(PF01527)(ER)
1051632.TPY_1430(PF00665) (PF13276)
1051632.TPY_3150(PF00872)(mitochondrial)
1051632.TPY_2705(PF01527)(ER)
1051632.TPY_2706(PF00665) (PF13276)
1051632.TPY_0530(PF00872)(mitochondrial)
1051632.TPY_1544(PF00665)(mitochondrial)
1051632.TPY_2340(PF02371)(mitochondrial)
1051632.TPY_3506(PF02371)(ER)
1051632.TPY_1450(PF00665) (PF13276)
1051632.TPY_1451(PF01527)(ER)
1051632.TPY_1440(PF00665) (PF13276)
1051632.TPY_0925(PF02971) (PF07837)
1051632.TPY_3316(PF09419)ER
1051632.TPY_2067(PF00665) (PF13276)
1051632.TPY_2068(PF01527)(ER)
1051632.TPY_2048(PF00665) (PF13276)
1051632.TPY_2043(PF00665)(ER)
1051632.TPY_2227(PF00665) (PF13276)
1051632.TPY_2225(PF13276)(mitochondrial)
1051632.TPY_3124(PF00665)(plastid)
1051632.TPY_1346(PF02133)
1051632.TPY_1291(PF00665)
1051632.TPY_3727(PF02371)
1051632.TPY_0814(PF00872)
1051632.TPY_1431(PF01527)
1051632.TPY_2183(PF01527)
1051632.TPY_2234(PF02899)
1051632.TPY_2230(PF01695)
1051632.TPY_2232(PF02899)
1051632.TPY_3137(PF02371)
1051632.TPY_1357(PF02133)
1051632.TPY_2888(PF03069)
1051632.TPY_1429(PF00665)
1051632.TPY_1425(PF00665)
1051632.TPY_1427(PF13401)
1051632.TPY_3145(PF00665)
1051632.TPY_3146(PF13401)
1051632.TPY_3147(PF01527)
1051632.TPY_3142(PF00872)
1051632.TPY_0395(PF00643)
1051632.TPY_0552(PF13683)
1051632.TPY_0550(PF01527)
1051632.TPY_0551(PF13276)
1051632.TPY_1946(PF00665)
1051632.TPY_1944(PF01695)
1051632.TPY_1942(PF01695)
1051632.TPY_1943(PF13683)
1051632.TPY_2050(PF01695)
1051632.TPY_0765(PF01597)
1051632.TPY_0768(PF02133)
1051632.TPY_3159(PF00872)
1051632.TPY_3156(PF00872)
1051632.TPY_0497(PF01695)
1051632.TPY_1170(PF02133)
1051632.TPY_2154(PF00872)
1051632.TPY_0544(PF02371)
1051632.TPY_0546(PF00872)
1051632.TPY_0534(PF01527)
1051632.TPY_0535(PF02371)
1051632.TPY_0537(PF00665)
1051632.TPY_0531(PF00872)
1051632.TPY_0532(PF00872)
1051632.TPY_0448(PF01527)
1051632.TPY_1541(PF01695)
1051632.TPY_2563(PF02371)
1051632.TPY_2362(PF00665)
1051632.TPY_3171(PF00872)
1051632.TPY_3172(PF00872)
1051632.TPY_0520(PF00872)
1051632.TPY_0457(PF02133)
1051632.TPY_0046(PF02371)
1051632.TPY_0047(PF01527)
1051632.TPY_3412(PF02133)
1051632.TPY_2173(PF00872)
1051632.TPY_2595(PF02371)
1051632.TPY_2352(PF00872)
1051632.TPY_0516(PF02899)
1051632.TPY_0518(PF02899)
1051632.TPY_2344(PF00872)
1051632.TPY_2628(PF13683)
1051632.TPY_2803(PF01597)
1051632.TPY_2117(PF01527)
1051632.TPY_2119(PF02371)
1051632.TPY_2338(PF01527)
1051632.TPY_2339(PF01695)
1051632.TPY_2334(PF13683)
1051632.TPY_2330(PF02899)
1051632.TPY_2332(PF01527)
1051632.TPY_2333(PF13276)
1051632.TPY_1591(PF14721)
1051632.TPY_2630(PF01695)
1051632.TPY_2039(PF02371)
1051632.TPY_2033(PF03069)
1051632.TPY_2032(PF03069)
1051632.TPY_2037(PF02371)
1051632.TPY_2034(PF03069)
1051632.TPY_1458(PF00665)
1051632.TPY_1452(PF00665)
1051632.TPY_2328(PF02899)
1051632.TPY_2321(PF13401)
1051632.TPY_2868(PF01695)
1051632.TPY_3526(PF01597)
1051632.TPY_3525(PF01597)
1051632.TPY_2133(PF01527)
1051632.TPY_2312(PF13276)
1051632.TPY_1449(PF02371)
1051632.TPY_2311(PF13683)
1051632.TPY_2314(PF01527)
1051632.TPY_1442(PF01527)
1051632.TPY_1445(PF01527)
1051632.TPY_2260(PF13401)
1051632.TPY_2268(PF13683)
1051632.TPY_3780(PF01527)
1051632.TPY_1876(PF13401)
1051632.TPY_1874(PF02899)
1051632.TPY_1894(PF13401)
1051632.TPY_2121(PF01527)
1051632.TPY_2014(PF02133)
1051632.TPY_2016(PF03069)
1051632.TPY_2278(PF02371)
1051632.TPY_2271(PF01695)
1051632.TPY_2270(PF00872)
1051632.TPY_2276(PF02371)
1051632.TPY_0433(PF00872)
1051632.TPY_1316(PF02133)
1051632.TPY_3640(PF02371)
1051632.TPY_1539(PF00872)
1051632.TPY_2209(PF02899)
1051632.TPY_2206(PF02899)
1051632.TPY_2070(PF13683)
1051632.TPY_2210(PF00872)
1051632.TPY_3112(PF01527)
1051632.TPY_3110(PF02371)
1051632.TPY_1246(PF02899)
1051632.TPY_1331(PF03069)
1051632.TPY_2047(PF01527)
1051632.TPY_2045(PF13401)
1051632.TPY_2226(PF13683)not used
1051632.TPY_1533(PF02371)
1051632.TPY_2228(PF01695)
1051632.TPY_1537(PF00872)
1051632.TPY_3125(PF01695)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================