Effective results for Pseudomonas fluorescens F113 (eggnog40)
Summary
Number of putative secreted proteins: 854
- Predicted by EffectiveT3: 213 (high confidence), 374 (low confidence)
- Predicted by EffectiveCCBD: 23 within, 16 before, 53 behind expected region 25..70aa
- Predicted by T4SEpre: 128
- Predicted by EffectiveELD: 33 eukaryotic-like domains, contained in 103 proteins (4 high, 99 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, (Type IV), Type VI
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 1114970.PSF113_3166 | + | (PF05593) | ER | ||
| 1114970.PSF113_5355 | + | (PF00639) | ER | ||
| 1114970.PSF113_2479 | + | ER | |||
| 1114970.PSF113_0510 | (PF06293) | (ER) | |||
| 1114970.PSF113_1971 | + | ER | |||
| 1114970.PSF113_2117 | (<) | ER | |||
| 1114970.PSF113_0236 | + | ER | |||
| 1114970.PSF113_5856 | + | ER | |||
| 1114970.PSF113_2492 | + | (mitochondrial) | |||
| 1114970.PSF113_0876 | PF04576 | mitochondrial | |||
| 1114970.PSF113_2700 | + | ER | |||
| 1114970.PSF113_1398 | + | ER | |||
| 1114970.PSF113_1254 | (<) | (ER) | |||
| 1114970.PSF113_2723 | + | ER | |||
| 1114970.PSF113_2721 | + | ER | |||
| 1114970.PSF113_4631 | (<) | ER | |||
| 1114970.PSF113_3119 | + | ER | |||
| 1114970.PSF113_2962 | + | ER | |||
| 1114970.PSF113_3686 | + | ER | |||
| 1114970.PSF113_4404 | (>) | (mitochondrial); mitochondrial | |||
| 1114970.PSF113_1717 | + | (ER) | |||
| 1114970.PSF113_3370 | (PF14870) | (ER) | |||
| 1114970.PSF113_3317 | + | ER | |||
| 1114970.PSF113_2046 | + | (mitochondrial) | |||
| 1114970.PSF113_5069 | + | (ER) | |||
| 1114970.PSF113_4083 | + | ER | |||
| 1114970.PSF113_1590 | (>) | ER | |||
| 1114970.PSF113_5594 | + | mitochondrial | |||
| 1114970.PSF113_0673 | + | ER | |||
| 1114970.PSF113_4046 | + | (ER) | |||
| 1114970.PSF113_2630 | (PF00639) | ER | |||
| 1114970.PSF113_3738 | (>) | ER | |||
| 1114970.PSF113_5086 | + | (ER) | |||
| 1114970.PSF113_1709 | (>) | ER | |||
| 1114970.PSF113_1065 | (PF14821) | (ER) | |||
| 1114970.PSF113_3754 | (PF02239) | mitochondrial | |||
| 1114970.PSF113_3751 | (PF02239) | ER | |||
| 1114970.PSF113_1983 | (>) | ER | |||
| 1114970.PSF113_2986 | (PF02239) | mitochondrial | |||
| 1114970.PSF113_3581 | (PF14330) | (mitochondrial) | |||
| 1114970.PSF113_2593 | (>) | mitochondrial; ER | |||
| 1114970.PSF113_4490 | + | (ER) | |||
| 1114970.PSF113_3773 | (>) | (ER) | |||
| 1114970.PSF113_1046 | + | mitochondrial | |||
| 1114970.PSF113_0958 | + | ER | |||
| 1114970.PSF113_3794 | + | ER | |||
| 1114970.PSF113_3959 | (>) | ER | |||
| 1114970.PSF113_0972 | (<) | ER | |||
| 1114970.PSF113_2699 | + | ER | |||
| 1114970.PSF113_2695 | + | ER; (plastid) | |||
| 1114970.PSF113_0735 | + | ER | |||
| 1114970.PSF113_5863 | + | ER | |||
| 1114970.PSF113_3859 | (>) | ER | |||
| 1114970.PSF113_3641 | (PF14870) | ER | |||
| 1114970.PSF113_3670 | + | ER | |||
| 1114970.PSF113_5631 | (>) | ER | |||
| 1114970.PSF113_4418 | + | (mitochondrial); (plastid) | |||
| 1114970.PSF113_3870 | (PF16952) | ER | |||
| 1114970.PSF113_3128 | + | ER | |||
| 1114970.PSF113_2836 | + | ER | |||
| 1114970.PSF113_2830 | (>) | ER | |||
| 1114970.PSF113_2388 | + | ER | |||
| 1114970.PSF113_4292 | + | (mitochondrial); (plastid) | |||
| 1114970.PSF113_0263 | + | (mitochondrial) | |||
| 1114970.PSF113_1417 | + | ER | |||
| 1114970.PSF113_1084 | + | ER | |||
| 1114970.PSF113_1883 | + | ER | |||
| 1114970.PSF113_4809 | + | (mitochondrial) | |||
| 1114970.PSF113_4319 | (+) | (>) | mitochondrial; (mitochondrial) | ||
| 1114970.PSF113_2562 | + | (mitochondrial) | |||
| 1114970.PSF113_2954 | (PF14870) | ER | |||
| 1114970.PSF113_3558 | + | ER | |||
| 1114970.PSF113_1304 | (PF01823) | (mitochondrial) | |||
| 1114970.PSF113_1170 | (PF04862) | ER | |||
| 1114970.PSF113_5246 | + | ER | |||
| 1114970.PSF113_5248 | + | mitochondrial | |||
| 1114970.PSF113_4049 | (>) | ER | |||
| 1114970.PSF113_2052 | + | mitochondrial; plastid | |||
| 1114970.PSF113_2580 | (PF14870) | (mitochondrial) | |||
| 1114970.PSF113_1773 | (PF04324) | (ER) | |||
| 1114970.PSF113_1342 | + | (ER) | |||
| 1114970.PSF113_4397 | + | (PF05593) | (plastid) | ||
| 1114970.PSF113_4915 | + | mitochondrial | |||
| 1114970.PSF113_3165 | (PF05593) | ER | |||
| 1114970.PSF113_3744 | (PF02239) | ER | |||
| 1114970.PSF113_5560 | + | ER | |||
| 1114970.PSF113_4264 | (<) | ER | |||
| 1114970.PSF113_3909 | + | ER | |||
| 1114970.PSF113_1196 | + | ER | |||
| 1114970.PSF113_4015 | (>) | ER | |||
| 1114970.PSF113_4609 | + | ER | |||
| 1114970.PSF113_4461 | + | ER | |||
| 1114970.PSF113_3968 | (>) | mitochondrial | |||
| 1114970.PSF113_0925 | + | ER | |||
| 1114970.PSF113_2159 | + | ER | |||
| 1114970.PSF113_3419 | + | ER | |||
| 1114970.PSF113_4059 | + | ER | |||
| 1114970.PSF113_3086 | (<) | ER | |||
| 1114970.PSF113_3432 | (>) | ER | |||
| 1114970.PSF113_5873 | (+) | (ER) | |||
| 1114970.PSF113_0513 | (+) | (mitochondrial) | |||
| 1114970.PSF113_3603 | (PF09347) | (mitochondrial) | |||
| 1114970.PSF113_5460 | + | (ER) | |||
| 1114970.PSF113_2806 | (PF04324) | (ER) | |||
| 1114970.PSF113_4405 | + | (plastid) | |||
| 1114970.PSF113_4844 | + | (mitochondrial) | |||
| 1114970.PSF113_3665 | (+) | mitochondrial; (mitochondrial) | |||
| 1114970.PSF113_2825 | (+) | (mitochondrial) | |||
| 1114970.PSF113_0270 | (>) | (mitochondrial) | |||
| 1114970.PSF113_2966 | (>) | (PF07287) | |||
| 1114970.PSF113_5215 | + | + | |||
| 1114970.PSF113_4302 | + | plastid | |||
| 1114970.PSF113_2881 | (+) | mitochondrial | |||
| 1114970.PSF113_2209 | (+) | + | (PF08787) | ||
| 1114970.PSF113_5067 | (+) | (mitochondrial); (plastid) | |||
| 1114970.PSF113_4360 | + | (plastid) | |||
| 1114970.PSF113_5718 | (PF01678) | (mitochondrial) | |||
| 1114970.PSF113_3017 | + | (plastid) | |||
| 1114970.PSF113_2635 | + | + | (plastid) | ||
| 1114970.PSF113_3251 | + | (plastid) | |||
| 1114970.PSF113_5574 | + | + | |||
| 1114970.PSF113_2403 | (+) | PF12255 (PF12256) | |||
| 1114970.PSF113_2402 | + | (plastid) | |||
| 1114970.PSF113_2401 | + | (plastid) | |||
| 1114970.PSF113_0630 | + | plastid | |||
| 1114970.PSF113_4600 | (+) | ER | |||
| 1114970.PSF113_2365 | (+) | mitochondrial | |||
| 1114970.PSF113_3912 | (PF00639) | (ER) | |||
| 1114970.PSF113_4823 | + | (plastid) | |||
| 1114970.PSF113_4064 | + | (plastid) | |||
| 1114970.PSF113_1536 | + | (mitochondrial) | |||
| 1114970.PSF113_3977 | (+) | (mitochondrial); (plastid) | |||
| 1114970.PSF113_4212 | + | plastid | |||
| 1114970.PSF113_0774 | (+) | (mitochondrial) | |||
| 1114970.PSF113_3898 | (PF13510) | (ER) | |||
| 1114970.PSF113_3891 | (+) | (ER) | |||
| 1114970.PSF113_1554 | + | plastid | |||
| 1114970.PSF113_4453 | + | plastid | |||
| 1114970.PSF113_3328 | (+) | (ER) | |||
| 1114970.PSF113_5801 | + | (PF14113) | |||
| 1114970.PSF113_3053 | (>) | + | |||
| 1114970.PSF113_0698 | (>) | (ER) | |||
| 1114970.PSF113_1571 | + | plastid | |||
| 1114970.PSF113_0732 | PF12255 (PF12256) | ||||
| 1114970.PSF113_0846 | (+) | ER; (ER) | |||
| 1114970.PSF113_1030 | + | (plastid) | |||
| 1114970.PSF113_2710 | (+) | ER; (ER) | |||
| 1114970.PSF113_3382 | (>) | (mitochondrial) | |||
| 1114970.PSF113_4109 | + | (PF03692) | |||
| 1114970.PSF113_0324b | + | plastid | |||
| 1114970.PSF113_0772 | (>) | (ER) | |||
| 1114970.PSF113_0777 | + | (plastid) | |||
| 1114970.PSF113_0776 | + | plastid | |||
| 1114970.PSF113_0775 | + | (mitochondrial) | |||
| 1114970.PSF113_5204 | (PF05593) | (ER) | |||
| 1114970.PSF113_2899 | (+) | + | (PF04444) | ||
| 1114970.PSF113_2661 | + | (ER) | |||
| 1114970.PSF113_3982 | (+) | ER; (ER) | |||
| 1114970.PSF113_2273 | (+) | mitochondrial; plastid | |||
| 1114970.PSF113_2755 | + | (>) | |||
| 1114970.PSF113_0648 | (>) | + | |||
| 1114970.PSF113_4562 | (+) | ER; (ER) | |||
| 1114970.PSF113_3728 | (PF13510) | (plastid) | |||
| 1114970.PSF113_0065 | (+) | ER | |||
| 1114970.PSF113_2605 | (+) | mitochondrial; (mitochondrial) | |||
| 1114970.PSF113_3922 | (PF02882) | (plastid) | |||
| 1114970.PSF113_1240 | (+) | ER; (ER) | |||
| 1114970.PSF113_0902 | (+) | ER | |||
| 1114970.PSF113_0090 | + | (plastid) | |||
| 1114970.PSF113_5503 | (+) | (ER) | |||
| 1114970.PSF113_4466 | (PF13332) | (mitochondrial) | |||
| 1114970.PSF113_0927 | (<) | + | |||
| 1114970.PSF113_5113 | (+) | (mitochondrial); plastid | |||
| 1114970.PSF113_0768 | (+) | (ER) | |||
| 1114970.PSF113_3414 | (>) | (mitochondrial) | |||
| 1114970.PSF113_5106 | (>) | (plastid) | |||
| 1114970.PSF113_1954 | (PF10142) | (ER) | |||
| 1114970.PSF113_5875 | + | ||||
| 1114970.PSF113_2805 | (PF13510) | ||||
| 1114970.PSF113_0234 | + | ||||
| 1114970.PSF113_4669 | (+) | (plastid) | |||
| 1114970.PSF113_2357 | + | ||||
| 1114970.PSF113_0531 | + | ||||
| 1114970.PSF113_0536 | (+) | (>) | |||
| 1114970.PSF113_4846 | + | ||||
| 1114970.PSF113_4361 | (PF05593) | ||||
| 1114970.PSF113_1629 | (+) | (PF14518) | |||
| 1114970.PSF113_3849 | + | ||||
| 1114970.PSF113_3846 | + | ||||
| 1114970.PSF113_2823 | (PF04324) | ||||
| 1114970.PSF113_5444 | (+) | (plastid) | |||
| 1114970.PSF113_5621 | + | ||||
| 1114970.PSF113_0879 | + | ||||
| 1114970.PSF113_4828 | + | ||||
| 1114970.PSF113_3472 | + | ||||
| 1114970.PSF113_3475 | + | ||||
| 1114970.PSF113_5168 | (>) | ||||
| 1114970.PSF113_1395 | (PF09347) | ||||
| 1114970.PSF113_4347 | (>) | ||||
| 1114970.PSF113_0112 | + | ||||
| 1114970.PSF113_0114 | + | ||||
| 1114970.PSF113_3643 | + | ||||
| 1114970.PSF113_5428 | + | ||||
| 1114970.PSF113_5394 | + | ||||
| 1114970.PSF113_5393 | + | ||||
| 1114970.PSF113_5148a | + | ||||
| 1114970.PSF113_4119 | (+) | (plastid) | |||
| 1114970.PSF113_0275 | + | ||||
| 1114970.PSF113_0078 | + | ||||
| 1114970.PSF113_0852 | + | ||||
| 1114970.PSF113_4020 | + | ||||
| 1114970.PSF113_2728 | + | ||||
| 1114970.PSF113_4243 | (+) | (mitochondrial) | |||
| 1114970.PSF113_0047 | (+) | (ER) | |||
| 1114970.PSF113_4939 | + | ||||
| 1114970.PSF113_3803 | + | ||||
| 1114970.PSF113_1662 | (PF09347) | ||||
| 1114970.PSF113_1337 | + | ||||
| 1114970.PSF113_2577 | + | ||||
| 1114970.PSF113_2575 | + | ||||
| 1114970.PSF113_1871 | (PF01678) | ||||
| 1114970.PSF113_4132 | (>) | ||||
| 1114970.PSF113_4134 | + | ||||
| 1114970.PSF113_0839 | + | ||||
| 1114970.PSF113_3560 | + | ||||
| 1114970.PSF113_0317 | + | ||||
| 1114970.PSF113_0311 | + | ||||
| 1114970.PSF113_2345 | + | ||||
| 1114970.PSF113_2347 | (>) | ||||
| 1114970.PSF113_4502 | + | ||||
| 1114970.PSF113_3822 | + | ||||
| 1114970.PSF113_1680 | + | ||||
| 1114970.PSF113_3175 | + | ||||
| 1114970.PSF113_5681 | + | ||||
| 1114970.PSF113_5024 | (>) | ||||
| 1114970.PSF113_5029 | + | ||||
| 1114970.PSF113_1854 | (PF05593) | ||||
| 1114970.PSF113_1853 | + | ||||
| 1114970.PSF113_4841 | (PF03692) | ||||
| 1114970.PSF113_4848 | + | ||||
| 1114970.PSF113_4518 | + | not used | |||
| 1114970.PSF113_2944 | (>) | ||||
| 1114970.PSF113_5234 | + | ||||
| 1114970.PSF113_1449 | (PF03692) | ||||
| 1114970.PSF113_2205 | + | ||||
| 1114970.PSF113_2208 | (+) | (plastid) | |||
| 1114970.PSF113_1789 | (PF07720) | ||||
| 1114970.PSF113_1167 | + | ||||
| 1114970.PSF113_1168 | + | ||||
| 1114970.PSF113_3529 | (PF02882) | ||||
| 1114970.PSF113_3526 | (PF13510) | ||||
| 1114970.PSF113_3521 | + | ||||
| 1114970.PSF113_2922 | + | ||||
| 1114970.PSF113_2923 | (PF03692) | ||||
| 1114970.PSF113_5257 | + | ||||
| 1114970.PSF113_4921 | (PF03692) | ||||
| 1114970.PSF113_1310 | (+) | plastid | |||
| 1114970.PSF113_0372 | (+) | (mitochondrial) | |||
| 1114970.PSF113_0974 | (PF14113) | ||||
| 1114970.PSF113_0993 | (+) | (PF08357) | |||
| 1114970.PSF113_0991 | + | ||||
| 1114970.PSF113_3314 | + | ||||
| 1114970.PSF113_5068 | + | ||||
| 1114970.PSF113_5064 | + | ||||
| 1114970.PSF113_4084 | (PF01678) | ||||
| 1114970.PSF113_1108 | + | ||||
| 1114970.PSF113_1103 | (>) | ||||
| 1114970.PSF113_4889 | + | not used | |||
| 1114970.PSF113_4882 | + | ||||
| 1114970.PSF113_5909 | + | ||||
| 1114970.PSF113_1374 | + | ||||
| 1114970.PSF113_1597 | + | ||||
| 1114970.PSF113_3336 | + | ||||
| 1114970.PSF113_5592 | + | ||||
| 1114970.PSF113_2243 | (PF04324) | ||||
| 1114970.PSF113_2242 | (PF13510) | ||||
| 1114970.PSF113_1299 | + | ||||
| 1114970.PSF113_1745 | (PF07287) | ||||
| 1114970.PSF113_4142 | + | ||||
| 1114970.PSF113_4715 | + | ||||
| 1114970.PSF113_4716 | + | ||||
| 1114970.PSF113_0241 | + | ||||
| 1114970.PSF113_1352 | + | ||||
| 1114970.PSF113_0409 | + | ||||
| 1114970.PSF113_0408 | + | ||||
| 1114970.PSF113_2002 | (<) | ||||
| 1114970.PSF113_0079a | + | ||||
| 1114970.PSF113_1396 | + | ||||
| 1114970.PSF113_5719 | + | ||||
| 1114970.PSF113_5714 | + | ||||
| 1114970.PSF113_1728 | + | ||||
| 1114970.PSF113_0589 | (>) | ||||
| 1114970.PSF113_4001 | + | ||||
| 1114970.PSF113_3012 | + | ||||
| 1114970.PSF113_5363 | + | ||||
| 1114970.PSF113_2029 | + | ||||
| 1114970.PSF113_2027 | + | ||||
| 1114970.PSF113_2287 | + | ||||
| 1114970.PSF113_5777 | (+) | (mitochondrial) | |||
| 1114970.PSF113_5770 | (+) | (plastid) | |||
| 1114970.PSF113_1259 | + | ||||
| 1114970.PSF113_1704 | + | ||||
| 1114970.PSF113_3580 | (PF07287) | ||||
| 1114970.PSF113_0912 | + | ||||
| 1114970.PSF113_5572 | + | ||||
| 1114970.PSF113_2409 | + | ||||
| 1114970.PSF113_5757 | + | ||||
| 1114970.PSF113_5754 | + | ||||
| 1114970.PSF113_1273 | + | ||||
| 1114970.PSF113_1182 | + | ||||
| 1114970.PSF113_1436 | + | ||||
| 1114970.PSF113_1926 | PF01363 | ||||
| 1114970.PSF113_4003 | + | ||||
| 1114970.PSF113_0055 | + | ||||
| 1114970.PSF113_3588 | (+) | (PF14330) | |||
| 1114970.PSF113_3587 | (PF07287) | ||||
| 1114970.PSF113_2368 | (PF04324) | ||||
| 1114970.PSF113_2367 | (PF13510) | ||||
| 1114970.PSF113_4565 | + | ||||
| 1114970.PSF113_4499 | + | ||||
| 1114970.PSF113_4270 | + | ||||
| 1114970.PSF113_2424 | + | ||||
| 1114970.PSF113_4062 | + | ||||
| 1114970.PSF113_4069 | + | ||||
| 1114970.PSF113_4011 | (+) | + | |||
| 1114970.PSF113_3219 | + | ||||
| 1114970.PSF113_3211 | + | ||||
| 1114970.PSF113_3213 | (+) | (ER) | |||
| 1114970.PSF113_3212 | + | ||||
| 1114970.PSF113_2306 | + | ||||
| 1114970.PSF113_0934 | + | ||||
| 1114970.PSF113_2384 | + | ||||
| 1114970.PSF113_5653 | + | ||||
| 1114970.PSF113_0455b | (>) | ||||
| 1114970.PSF113_1028 | + | ||||
| 1114970.PSF113_1532 | (+) | (mitochondrial) | |||
| 1114970.PSF113_1531 | + | ||||
| 1114970.PSF113_4217 | + | ||||
| 1114970.PSF113_2448 | + | ||||
| 1114970.PSF113_5794 | + | ||||
| 1114970.PSF113_1490 | (PF13332) | ||||
| 1114970.PSF113_1493 | + | ||||
| 1114970.PSF113_1942 | (>) | ||||
| 1114970.PSF113_0019 | + | ||||
| 1114970.PSF113_3899 | (PF04324) | ||||
| 1114970.PSF113_3092 | + | ||||
| 1114970.PSF113_3091 | (+) | (>) | |||
| 1114970.PSF113_4885 | (+) | (<) | |||
| 1114970.PSF113_4887 | (<) | ||||
| 1114970.PSF113_4452 | + | ||||
| 1114970.PSF113_4456 | (>) | ||||
| 1114970.PSF113_4458 | + | ||||
| 1114970.PSF113_4953 | + | ||||
| 1114970.PSF113_0755 | + | ||||
| 1114970.PSF113_0754 | + | ||||
| 1114970.PSF113_4988 | (+) | (mitochondrial) | |||
| 1114970.PSF113_0204 | + | ||||
| 1114970.PSF113_3407 | + | ||||
| 1114970.PSF113_5809 | (PF05593) | ||||
| 1114970.PSF113_3324 | (+) | (mitochondrial) | |||
| 1114970.PSF113_2466 | + | ||||
| 1114970.PSF113_2469 | (PF03538) | ||||
| 1114970.PSF113_1420 | + | ||||
| 1114970.PSF113_5117 | + | ||||
| 1114970.PSF113_1394 | (PF09347) | ||||
| 1114970.PSF113_0565 | + | ||||
| 1114970.PSF113_1967 | + | ||||
| 1114970.PSF113_1618 | + | ||||
| 1114970.PSF113_4610 | + | ||||
| 1114970.PSF113_4613 | (+) | (>) | |||
| 1114970.PSF113_5479 | (+) | (PF08787) | |||
| 1114970.PSF113_5615 | + | ||||
| 1114970.PSF113_5610 | + | ||||
| 1114970.PSF113_0734 | (PF03538) | ||||
| 1114970.PSF113_3429 | + | ||||
| 1114970.PSF113_0740 | + | ||||
| 1114970.PSF113_2489 | (PF14870) | ||||
| 1114970.PSF113_2482 | + | ||||
| 1114970.PSF113_0746 | + | ||||
| 1114970.PSF113_5131 | + | ||||
| 1114970.PSF113_0507 | (PF06293) | ||||
| 1114970.PSF113_0508 | (PF06293) | ||||
| 1114970.PSF113_0509 | (PF06293) | ||||
| 1114970.PSF113_1906 | + | ||||
| 1114970.PSF113_2102 | + | ||||
| 1114970.PSF113_3678 | (>) | ||||
| 1114970.PSF113_3677 | + | ||||
| 1114970.PSF113_5639 | + | ||||
| 1114970.PSF113_4414 | + | ||||
| 1114970.PSF113_3444 | (+) | (PF04444) | |||
| 1114970.PSF113_5846 | (>) | ||||
| 1114970.PSF113_5842 | + | ||||
| 1114970.PSF113_0522 | (+) | (mitochondrial) | |||
| 1114970.PSF113_0381 | (+) | (mitochondrial) | |||
| 1114970.PSF113_3384 | + | ||||
| 1114970.PSF113_3380 | + | ||||
| 1114970.PSF113_5432 | (PF13510) | ||||
| 1114970.PSF113_5438 | + | ||||
| 1114970.PSF113_4837 | (>) | ||||
| 1114970.PSF113_0641 | (>) | ||||
| 1114970.PSF113_2737 | + | ||||
| 1114970.PSF113_5174 | + | ||||
| 1114970.PSF113_5170 | (PF08732) | ||||
| 1114970.PSF113_5179 | + | ||||
| 1114970.PSF113_3812 | (+) | (plastid) | |||
| 1114970.PSF113_3100 | + | ||||
| 1114970.PSF113_4819 | + | ||||
| 1114970.PSF113_2758 | (PF14821) | ||||
| 1114970.PSF113_5731 | + | ||||
| 1114970.PSF113_1472 | + | ||||
| 1114970.PSF113_3830 | + | ||||
| 1114970.PSF113_0002 | + | ||||
| 1114970.PSF113_0005 | + | ||||
| 1114970.PSF113_1698 | + | ||||
| 1114970.PSF113_1696 | + | ||||
| 1114970.PSF113_4640 | + | ||||
| 1114970.PSF113_3343 | + | ||||
| 1114970.PSF113_3169 | (PF13510) | ||||
| 1114970.PSF113_1793 | + | ||||
| 1114970.PSF113_2564 | + | ||||
| 1114970.PSF113_4128 | + | ||||
| 1114970.PSF113_0770 | + | ||||
| 1114970.PSF113_4871 | + | ||||
| 1114970.PSF113_0802 | (+) | + | |||
| 1114970.PSF113_3572 | + | ||||
| 1114970.PSF113_3578 | (>) | ||||
| 1114970.PSF113_5200 | (PF14821) | ||||
| 1114970.PSF113_0095 | (+) | (PF03162) | |||
| 1114970.PSF113_1451 | + | ||||
| 1114970.PSF113_4392 | + | ||||
| 1114970.PSF113_2546 | + | ||||
| 1114970.PSF113_0294 | + | ||||
| 1114970.PSF113_0793 | (PF13332) | ||||
| 1114970.PSF113_1848 | + | ||||
| 1114970.PSF113_4507 | + | ||||
| 1114970.PSF113_5827 | + | ||||
| 1114970.PSF113_3559 | + | ||||
| 1114970.PSF113_2936 | (PF14518) | ||||
| 1114970.PSF113_5223 | + | ||||
| 1114970.PSF113_5227 | (+) | (mitochondrial) | |||
| 1114970.PSF113_1305 | (<) | ||||
| 1114970.PSF113_5837 | + | ||||
| 1114970.PSF113_1923 | + | ||||
| 1114970.PSF113_2216 | (>) | ||||
| 1114970.PSF113_3702 | + | ||||
| 1114970.PSF113_1796 | (<) | ||||
| 1114970.PSF113_1792 | (>) | ||||
| 1114970.PSF113_1791 | (>) | ||||
| 1114970.PSF113_4526 | + | ||||
| 1114970.PSF113_3539 | (PF09347) | ||||
| 1114970.PSF113_3534 | + | ||||
| 1114970.PSF113_3537 | (PF02882) | ||||
| 1114970.PSF113_2911 | (PF14518) | ||||
| 1114970.PSF113_5243 | + | ||||
| 1114970.PSF113_0947 | + | ||||
| 1114970.PSF113_1368 | + | ||||
| 1114970.PSF113_1012 | (>) | ||||
| 1114970.PSF113_1581 | + | ||||
| 1114970.PSF113_1580 | + | ||||
| 1114970.PSF113_1587 | + | ||||
| 1114970.PSF113_0368 | (PF03692) | ||||
| 1114970.PSF113_0187 | + | ||||
| 1114970.PSF113_0987 | + | ||||
| 1114970.PSF113_4959 | + | ||||
| 1114970.PSF113_3321 | + | ||||
| 1114970.PSF113_0757 | + | ||||
| 1114970.PSF113_2054 | + | ||||
| 1114970.PSF113_5588 | + | ||||
| 1114970.PSF113_1771 | (PF04324) | ||||
| 1114970.PSF113_4542 | (+) | (PF06293) | |||
| 1114970.PSF113_5269 | + | ||||
| 1114970.PSF113_2256 | (+) | + | |||
| 1114970.PSF113_5700 | + | ||||
| 1114970.PSF113_0941 | + | ||||
| 1114970.PSF113_1134 | + | ||||
| 1114970.PSF113_4568 | (PF04324) | ||||
| 1114970.PSF113_3067 | + | ||||
| 1114970.PSF113_0415 | + | ||||
| 1114970.PSF113_2011 | + | ||||
| 1114970.PSF113_1738 | (>) | ||||
| 1114970.PSF113_3268 | + | ||||
| 1114970.PSF113_3269 | + | ||||
| 1114970.PSF113_3267 | (PF00639) | ||||
| 1114970.PSF113_0607 | (+) | + | |||
| 1114970.PSF113_1956 | + | ||||
| 1114970.PSF113_4056 | + | ||||
| 1114970.PSF113_0297 | + | ||||
| 1114970.PSF113_3924 | + | ||||
| 1114970.PSF113_2034 | + | ||||
| 1114970.PSF113_2035 | (PF04444) | ||||
| 1114970.PSF113_2031 | (PF04444) | ||||
| 1114970.PSF113_3749 | + | ||||
| 1114970.PSF113_3741 | + | ||||
| 1114970.PSF113_5564 | + | ||||
| 1114970.PSF113_2295 | + | ||||
| 1114970.PSF113_5745 | + | ||||
| 1114970.PSF113_5749 | + | ||||
| 1114970.PSF113_5748 | (+) | (PF03692) | |||
| 1114970.PSF113_1719 | + | ||||
| 1114970.PSF113_0596 | (<) | ||||
| 1114970.PSF113_4742 | + | ||||
| 1114970.PSF113_2990 | (>) | ||||
| 1114970.PSF113_2992 | + | ||||
| 1114970.PSF113_2371 | + | ||||
| 1114970.PSF113_0450 | + | ||||
| 1114970.PSF113_0451 | + | ||||
| 1114970.PSF113_1054 | + | ||||
| 1114970.PSF113_1503 | + | ||||
| 1114970.PSF113_3761 | + | ||||
| 1114970.PSF113_0091 | + | ||||
| 1114970.PSF113_2416 | + | ||||
| 1114970.PSF113_1996 | + | ||||
| 1114970.PSF113_0028 | + | ||||
| 1114970.PSF113_0674 | + | ||||
| 1114970.PSF113_3220 | (>) | ||||
| 1114970.PSF113_3596 | (PF14518) | ||||
| 1114970.PSF113_3595 | (<) | ||||
| 1114970.PSF113_3592 | (>) | ||||
| 1114970.PSF113_2318 | + | ||||
| 1114970.PSF113_5338 | (<) | ||||
| 1114970.PSF113_1522 | + | ||||
| 1114970.PSF113_3783 | (PF00639) | ||||
| 1114970.PSF113_3780 | (<) | ||||
| 1114970.PSF113_3786 | + | not used | |||
| 1114970.PSF113_2784 | + | ||||
| 1114970.PSF113_4650 | + | ||||
| 1114970.PSF113_1205 | + | ||||
| 1114970.PSF113_1200 | + | ||||
| 1114970.PSF113_2153 | (PF13510) | ||||
| 1114970.PSF113_2337 | (PF16485) | ||||
| 1114970.PSF113_5645 | (+) | + | |||
| 1114970.PSF113_1545 | + | ||||
| 1114970.PSF113_0760 | + | ||||
| 1114970.PSF113_5815 | + | ||||
| 1114970.PSF113_5811 | (PF05593) | ||||
| 1114970.PSF113_1483 | + | ||||
| 1114970.PSF113_0572 | + | ||||
| 1114970.PSF113_3082 | (PF14518) | ||||
| 1114970.PSF113_2133 | (+) | (plastid) | |||
| 1114970.PSF113_3623 | + | ||||
| 1114970.PSF113_3624 | + | ||||
| 1114970.PSF113_5480 | (+) | (PF08787) | |||
| 1114970.PSF113_5481 | + | ||||
| 1114970.PSF113_2863 | + | ||||
| 1114970.PSF113_5663 | + | ||||
| 1114970.PSF113_5661 | + | ||||
| 1114970.PSF113_2873 | (+) | ||||
| 1114970.PSF113_1976 | (+) | ||||
| 1114970.PSF113_1608 | (+) | ||||
| 1114970.PSF113_2111 | (+) | ||||
| 1114970.PSF113_3609 | (+) | ||||
| 1114970.PSF113_3602 | (+) | ||||
| 1114970.PSF113_3601 | (+) | ||||
| 1114970.PSF113_2807 | (+) | ||||
| 1114970.PSF113_0725 | (+) | ||||
| 1114970.PSF113_3459 | (+) | ||||
| 1114970.PSF113_5859 | (+) | ||||
| 1114970.PSF113_0321 | (+) | ||||
| 1114970.PSF113_0758 | (+) | ||||
| 1114970.PSF113_5142 | (+) | ||||
| 1114970.PSF113_0537 | (+) | ||||
| 1114970.PSF113_5884 | (+) | ||||
| 1114970.PSF113_2399 | (+) | ||||
| 1114970.PSF113_2871 | (+) | ||||
| 1114970.PSF113_2532 | (+) | ||||
| 1114970.PSF113_2534 | (+) | ||||
| 1114970.PSF113_5624 | (+) | ||||
| 1114970.PSF113_4171 | (+) | ||||
| 1114970.PSF113_4173 | (+) | ||||
| 1114970.PSF113_0259 | (+) | ||||
| 1114970.PSF113_3474 | (+) | ||||
| 1114970.PSF113_4079 | (+) | ||||
| 1114970.PSF113_5164 | (+) | ||||
| 1114970.PSF113_0224 | (+) | ||||
| 1114970.PSF113_0222 | (+) | ||||
| 1114970.PSF113_3396 | (+) | ||||
| 1114970.PSF113_3397 | (+) | ||||
| 1114970.PSF113_2519 | (+) | ||||
| 1114970.PSF113_1892 | (+) | ||||
| 1114970.PSF113_4751 | (+) | ||||
| 1114970.PSF113_4754 | (+) | ||||
| 1114970.PSF113_5188 | (+) | ||||
| 1114970.PSF113_4936 | (+) | ||||
| 1114970.PSF113_3808 | (+) | ||||
| 1114970.PSF113_4321 | (+) | ||||
| 1114970.PSF113_4323 | (+) | ||||
| 1114970.PSF113_3114 | (+) | ||||
| 1114970.PSF113_2574 | (+) | ||||
| 1114970.PSF113_1873 | (+) | ||||
| 1114970.PSF113_1870 | (+) | ||||
| 1114970.PSF113_1874 | (+) | ||||
| 1114970.PSF113_4130 | (+) | ||||
| 1114970.PSF113_4795 | (+) | ||||
| 1114970.PSF113_3569 | (+) | ||||
| 1114970.PSF113_2305 | (+) | ||||
| 1114970.PSF113_1466 | (+) | ||||
| 1114970.PSF113_1682 | (+) | ||||
| 1114970.PSF113_1687 | (+) | ||||
| 1114970.PSF113_3355 | (+) | ||||
| 1114970.PSF113_3170 | (+) | ||||
| 1114970.PSF113_3683 | (+) | ||||
| 1114970.PSF113_4403 | (+) | ||||
| 1114970.PSF113_4519 | (+) | ||||
| 1114970.PSF113_2949 | (+) | ||||
| 1114970.PSF113_0170 | (+) | ||||
| 1114970.PSF113_3377 | (+) | ||||
| 1114970.PSF113_3375 | (+) | ||||
| 1114970.PSF113_3123 | (+) | ||||
| 1114970.PSF113_1831 | (+) | ||||
| 1114970.PSF113_1788 | (+) | ||||
| 1114970.PSF113_0599 | (+) | ||||
| 1114970.PSF113_3525 | (+) | ||||
| 1114970.PSF113_2928 | (+) | ||||
| 1114970.PSF113_5258 | (+) | ||||
| 1114970.PSF113_4253 | (+) | ||||
| 1114970.PSF113_0378 | (+) | ||||
| 1114970.PSF113_0198 | (+) | ||||
| 1114970.PSF113_0197 | (+) | ||||
| 1114970.PSF113_0195 | (+) | ||||
| 1114970.PSF113_2269 | (+) | ||||
| 1114970.PSF113_4086 | (+) | ||||
| 1114970.PSF113_4730 | (+) | ||||
| 1114970.PSF113_3502 | (+) | ||||
| 1114970.PSF113_3509 | (+) | ||||
| 1114970.PSF113_1370 | (+) | ||||
| 1114970.PSF113_1596 | (+) | ||||
| 1114970.PSF113_4940 | (+) | ||||
| 1114970.PSF113_3334 | (+) | ||||
| 1114970.PSF113_3197 | (+) | ||||
| 1114970.PSF113_3198 | (+) | ||||
| 1114970.PSF113_2249 | (+) | ||||
| 1114970.PSF113_3296 | (+) | ||||
| 1114970.PSF113_0652 | (+) | ||||
| 1114970.PSF113_0654 | (+) | ||||
| 1114970.PSF113_0656 | (+) | ||||
| 1114970.PSF113_3077 | (+) | ||||
| 1114970.PSF113_0243 | (+) | ||||
| 1114970.PSF113_3712 | (+) | ||||
| 1114970.PSF113_3719 | (+) | ||||
| 1114970.PSF113_5256 | (+) | ||||
| 1114970.PSF113_0094 | (+) | ||||
| 1114970.PSF113_0586 | (+) | ||||
| 1114970.PSF113_0899 | (+) | ||||
| 1114970.PSF113_3011 | (+) | ||||
| 1114970.PSF113_0909 | (+) | ||||
| 1114970.PSF113_3485 | (+) | ||||
| 1114970.PSF113_3731 | (+) | ||||
| 1114970.PSF113_5085 | (+) | ||||
| 1114970.PSF113_0613 | (+) | ||||
| 1114970.PSF113_5347 | (+) | ||||
| 1114970.PSF113_0446 | (+) | ||||
| 1114970.PSF113_0911 | (+) | ||||
| 1114970.PSF113_5755 | (+) | ||||
| 1114970.PSF113_1271 | (+) | ||||
| 1114970.PSF113_1927 | (+) | ||||
| 1114970.PSF113_0584 | (+) | ||||
| 1114970.PSF113_0638 | (+) | ||||
| 1114970.PSF113_2362 | (+) | ||||
| 1114970.PSF113_2592 | (+) | ||||
| 1114970.PSF113_4274 | (+) | ||||
| 1114970.PSF113_2422 | (+) | ||||
| 1114970.PSF113_4061 | (+) | ||||
| 1114970.PSF113_1041 | (+) | ||||
| 1114970.PSF113_4272 | (+) | ||||
| 1114970.PSF113_0933 | (+) | ||||
| 1114970.PSF113_1537 | (+) | ||||
| 1114970.PSF113_1763 | (+) | ||||
| 1114970.PSF113_2446 | (+) | ||||
| 1114970.PSF113_2443 | (+) | ||||
| 1114970.PSF113_2442 | (+) | ||||
| 1114970.PSF113_5799 | (+) | ||||
| 1114970.PSF113_1941 | (+) | ||||
| 1114970.PSF113_4736 | (+) | ||||
| 1114970.PSF113_3093 | (+) | ||||
| 1114970.PSF113_3638 | (+) | ||||
| 1114970.PSF113_1557 | (+) | ||||
| 1114970.PSF113_4450 | (+) | ||||
| 1114970.PSF113_3325 | (+) | ||||
| 1114970.PSF113_3054 | (+) | ||||
| 1114970.PSF113_1042 | (+) | ||||
| 1114970.PSF113_2122 | (+) | ||||
| 1114970.PSF113_5470 | (+) | ||||
| 1114970.PSF113_2698 | (+) | ||||
| 1114970.PSF113_5271 | (+) | ||||
| 1114970.PSF113_1453 | (+) | ||||
| 1114970.PSF113_5132 | (+) | ||||
| 1114970.PSF113_5136 | (+) | ||||
| 1114970.PSF113_5052 | (+) | ||||
| 1114970.PSF113_4065 | (+) | ||||
| 1114970.PSF113_1639 | (+) | ||||
| 1114970.PSF113_3852 | (+) | ||||
| 1114970.PSF113_3855 | (+) | ||||
| 1114970.PSF113_2101 | (+) | ||||
| 1114970.PSF113_0863 | (+) | ||||
| 1114970.PSF113_2712 | (+) | ||||
| 1114970.PSF113_2714 | (+) | ||||
| 1114970.PSF113_1777 | (+) | ||||
| 1114970.PSF113_5151 | (+) | ||||
| 1114970.PSF113_4354 | (+) | ||||
| 1114970.PSF113_0320 | (+) | ||||
| 1114970.PSF113_0357 | (+) | ||||
| 1114970.PSF113_2837 | (+) | ||||
| 1114970.PSF113_5431 | (+) | ||||
| 1114970.PSF113_2523 | (+) | ||||
| 1114970.PSF113_5387 | (+) | ||||
| 1114970.PSF113_4294 | (+) | ||||
| 1114970.PSF113_0266 | (+) | ||||
| 1114970.PSF113_4833 | (+) | ||||
| 1114970.PSF113_2735 | (+) | ||||
| 1114970.PSF113_3994 | (+) | not used | |||
| 1114970.PSF113_5650 | (+) | ||||
| 1114970.PSF113_3816 | (+) | ||||
| 1114970.PSF113_4334 | (+) | ||||
| 1114970.PSF113_1674 | (+) | ||||
| 1114970.PSF113_3106 | (+) | ||||
| 1114970.PSF113_0312 | (+) | not used | |||
| 1114970.PSF113_2507 | (+) | ||||
| 1114970.PSF113_1087 | (+) | ||||
| 1114970.PSF113_1887 | (+) | ||||
| 1114970.PSF113_1881 | (+) | ||||
| 1114970.PSF113_1889 | (+) | ||||
| 1114970.PSF113_0324a | (+) | ||||
| 1114970.PSF113_5914 | (+) | ||||
| 1114970.PSF113_5917 | (+) | ||||
| 1114970.PSF113_2751 | (+) | ||||
| 1114970.PSF113_5190 | (+) | ||||
| 1114970.PSF113_5195 | (+) | ||||
| 1114970.PSF113_3831 | (+) | ||||
| 1114970.PSF113_0003 | (+) | ||||
| 1114970.PSF113_1692 | (+) | ||||
| 1114970.PSF113_3342 | (+) | ||||
| 1114970.PSF113_3341 | (+) | ||||
| 1114970.PSF113_0125 | (+) | ||||
| 1114970.PSF113_0805 | (+) | ||||
| 1114970.PSF113_3575 | (+) | ||||
| 1114970.PSF113_3577 | (+) | ||||
| 1114970.PSF113_2958 | (+) | ||||
| 1114970.PSF113_1455 | (+) | not used | |||
| 1114970.PSF113_0496 | (+) | ||||
| 1114970.PSF113_4393 | (+) | ||||
| 1114970.PSF113_2092 | (+) | ||||
| 1114970.PSF113_2093 | (+) | ||||
| 1114970.PSF113_2540 | (+) | ||||
| 1114970.PSF113_0795 | (+) | ||||
| 1114970.PSF113_0797 | (+) | ||||
| 1114970.PSF113_4501 | (+) | ||||
| 1114970.PSF113_4578 | (+) | ||||
| 1114970.PSF113_5225 | (+) | ||||
| 1114970.PSF113_1300 | (+) | ||||
| 1114970.PSF113_3300 | (+) | ||||
| 1114970.PSF113_1829 | (+) | ||||
| 1114970.PSF113_1178 | (+) | ||||
| 1114970.PSF113_4812 | (+) | ||||
| 1114970.PSF113_3538 | (+) | ||||
| 1114970.PSF113_3535 | (+) | ||||
| 1114970.PSF113_2669 | (+) | ||||
| 1114970.PSF113_2668 | (+) | ||||
| 1114970.PSF113_5244 | (+) | ||||
| 1114970.PSF113_0183 | (+) | ||||
| 1114970.PSF113_3327 | (+) | ||||
| 1114970.PSF113_2051 | (+) | ||||
| 1114970.PSF113_2271 | (+) | ||||
| 1114970.PSF113_1806 | (+) | ||||
| 1114970.PSF113_4541 | (+) | not used | |||
| 1114970.PSF113_2645 | (+) | ||||
| 1114970.PSF113_5260 | (+) | ||||
| 1114970.PSF113_4384 | (+) | ||||
| 1114970.PSF113_2075 | (+) | ||||
| 1114970.PSF113_3703 | (+) | ||||
| 1114970.PSF113_4703 | (+) | ||||
| 1114970.PSF113_2257 | (+) | ||||
| 1114970.PSF113_1282 | (+) | ||||
| 1114970.PSF113_1757 | (+) | ||||
| 1114970.PSF113_0942 | (+) | ||||
| 1114970.PSF113_2855 | (+) | ||||
| 1114970.PSF113_1133 | (+) | ||||
| 1114970.PSF113_0667 | (+) | ||||
| 1114970.PSF113_3281 | (+) | ||||
| 1114970.PSF113_0880 | (+) | ||||
| 1114970.PSF113_4394 | (+) | ||||
| 1114970.PSF113_4396 | (+) | ||||
| 1114970.PSF113_0413 | (+) | ||||
| 1114970.PSF113_0411 | (+) | ||||
| 1114970.PSF113_2016 | (+) | ||||
| 1114970.PSF113_4861 | (+) | ||||
| 1114970.PSF113_3263 | (+) | ||||
| 1114970.PSF113_4584 | (+) | ||||
| 1114970.PSF113_3006 | (+) | ||||
| 1114970.PSF113_2359 | (+) | ||||
| 1114970.PSF113_0477 | (+) | ||||
| 1114970.PSF113_1076 | (+) | ||||
| 1114970.PSF113_1074 | (+) | ||||
| 1114970.PSF113_1078 | (+) | ||||
| 1114970.PSF113_0296 | (+) | ||||
| 1114970.PSF113_0842 | (+) | ||||
| 1114970.PSF113_2030 | (+) | ||||
| 1114970.PSF113_3747 | (+) | ||||
| 1114970.PSF113_5567 | (+) | ||||
| 1114970.PSF113_5561 | (+) | ||||
| 1114970.PSF113_2294 | (+) | ||||
| 1114970.PSF113_2747 | (+) | ||||
| 1114970.PSF113_4236 | (+) | ||||
| 1114970.PSF113_0622 | (+) | ||||
| 1114970.PSF113_2191 | (+) | ||||
| 1114970.PSF113_3025 | (+) | ||||
| 1114970.PSF113_2375 | (+) | ||||
| 1114970.PSF113_4482 | (+) | ||||
| 1114970.PSF113_4486 | (+) | ||||
| 1114970.PSF113_1053 | (+) | ||||
| 1114970.PSF113_4263 | (+) | ||||
| 1114970.PSF113_4268 | (+) | ||||
| 1114970.PSF113_3904 | (+) | ||||
| 1114970.PSF113_4594 | (+) | ||||
| 1114970.PSF113_4776 | (+) | ||||
| 1114970.PSF113_0098 | (+) | ||||
| 1114970.PSF113_4013 | (+) | ||||
| 1114970.PSF113_0024 | (+) | ||||
| 1114970.PSF113_0022 | (+) | ||||
| 1114970.PSF113_4593 | (+) | ||||
| 1114970.PSF113_3223 | (+) | ||||
| 1114970.PSF113_4463 | (+) | ||||
| 1114970.PSF113_4460 | (+) | ||||
| 1114970.PSF113_0920 | (+) | ||||
| 1114970.PSF113_2782 | (+) | ||||
| 1114970.PSF113_2788 | (+) | ||||
| 1114970.PSF113_5833 | (+) | ||||
| 1114970.PSF113_0338 | (+) | ||||
| 1114970.PSF113_1201 | (+) | ||||
| 1114970.PSF113_1209 | (+) | ||||
| 1114970.PSF113_3204 | (+) | ||||
| 1114970.PSF113_3200 | (+) | not used | |||
| 1114970.PSF113_2154 | (+) | ||||
| 1114970.PSF113_2334 | (+) | ||||
| 1114970.PSF113_2849 | (+) | ||||
| 1114970.PSF113_0769 | (+) | ||||
| 1114970.PSF113_1499 | (+) | ||||
| 1114970.PSF113_3417 | (+) | ||||
| 1114970.PSF113_2459 | (+) | ||||
| 1114970.PSF113_0212 | (+) | ||||
| 1114970.PSF113_0214 | (+) | ||||
| 1114970.PSF113_0216 | (+) | ||||
| 1114970.PSF113_0683 | (+) | ||||
| 1114970.PSF113_1035 | (+) | ||||
| 1114970.PSF113_3888 | (+) | ||||
| 1114970.PSF113_3880 | (+) | ||||
| 1114970.PSF113_3882 | (+) | ||||
| 1114970.PSF113_2134 | (+) | ||||
| 1114970.PSF113_5489 | (+) | ||||
| 1114970.PSF113_2861 | (+) | ||||
| 1114970.PSF113_2860 | (+) | ||||
| 1114970.PSF113_2869 | (+) | ||||
| 1114970.PSF113_1560 | (+) | ||||
| 1114970.PSF113_4426 | (+) | ||||
| 1114970.PSF113_3430 | (+) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveT3 predictions using new standard model 2.0.1 (PROTEINS.NEW.EFFECTIVET3)
- EffectiveT3 predictions using old standard model 1.0.1 (PROTEINS.OLD.EFFECTIVET3)
- EffectiveCCBD predictions (PROTEINS.CHAPERONES.TXT)
- T4SEpre bpbAac predictions (T4SEpre_bpbAac_FinalResult.csv)
- T4SEpre psAac predictions (T4SEpre_psAac_FinalResult.csv)
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: YES (FDR = 0.5 %)
- Functional Type III secretion system: YES (FDR = 12.5 %)
Estimated copy number = 2.4 (24/10 KEGG proteins)
- Functional Type IV secretion system: YES (FDR = 7.2 %)
Estimated copy number = 0.0 (0/10 KEGG proteins)
- Functional Type VI secretion system: YES (FDR = 7.7 %)
Estimated copy number = 3.25 (26/8 KEGG proteins)
Individual results for each secretion system
- List of 100 most important COGs/NOGs for prediction of functional Type III secretion system (T3_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type IV secretion system (T4_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type VI secretion system (T6_top100_COGS.xls)
- List of COGs assigned to Type III secretion system in KEGG (T3SS_KEGG_cmp.xls)
- List of COGs assigned to Type IV secretion system in KEGG (T4SS_KEGG_cmp.xls)
- List of COGs assigned to Type VI secretion system in KEGG (T6SS_KEGG_cmp.xls)
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
Estimated copy number = 2.4 (24/10 KEGG proteins)
Estimated copy number = 0.0 (0/10 KEGG proteins)
Estimated copy number = 3.25 (26/8 KEGG proteins)
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
