Metamenu

Effective results for Exiguobacterium sibiricum 255-15 (eggnog40)

Summary

Number of putative secreted proteins: 59
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 59 proteins (0 high, 59 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
262543.Exig_0323(PF12323)mitochondrial
262543.Exig_2547(PF08239)ER
262543.Exig_2761(PF12323)mitochondrial
262543.Exig_1315(PF12323)mitochondrial; (mitochondrial)
262543.Exig_1434(PF12323)mitochondrial
262543.Exig_1184(PF08239)(ER); ER
262543.Exig_1185(PF08239)(ER)
262543.Exig_1613(PF08239)ER
262543.Exig_2224(PF08239)ER
262543.Exig_2726(PF08239)ER
262543.Exig_1068(PF08239)(ER)
262543.Exig_1049(PF13492)(ER)
262543.Exig_2665(PF13492)ER
262543.Exig_2895(PF08239)ER
262543.Exig_1640(PF12323)mitochondrial
262543.Exig_0732(PF13492)mitochondrial
262543.Exig_0519(PF08239)ER
262543.Exig_0359(PF13492)ER
262543.Exig_2607(PF12323)(mitochondrial)
262543.Exig_2477(PF08239)ER
262543.Exig_1102(PF08239)ER
262543.Exig_0742(PF12323)mitochondrial
262543.Exig_0964(PF13492)ER
262543.Exig_1578(PF12323)mitochondrial
262543.Exig_1828(PF13539)ER
262543.Exig_2140(PF03142)(ER)
262543.Exig_2794(PF12323)mitochondrial
262543.Exig_0443(PF12323)mitochondrial
262543.Exig_3020(PF12323)(mitochondrial)
262543.Exig_0930(PF08239)ER
262543.Exig_0132(PF13539)(mitochondrial)
262543.Exig_1259(PF09346)(mitochondrial)
262543.Exig_1156(PF13492)(mitochondrial)
262543.Exig_2442(PF03161)
262543.Exig_1304(PF12323)
262543.Exig_0328(PF13936)
262543.Exig_1430(PF13518)
262543.Exig_2225(PF13936)
262543.Exig_2647(PF13936)
262543.Exig_0622(PF13518)
262543.Exig_1299(PF13936)
262543.Exig_1678(PF13518)
262543.Exig_0256(PF13936)
262543.Exig_1272(PF09346)
262543.Exig_1273(PF09346)
262543.Exig_1121(PF13936)
262543.Exig_1127(PF09346)
262543.Exig_1128(PF09346)
262543.Exig_1129(PF13936)
262543.Exig_2060(PF13936)
262543.Exig_2062(PF13936)
262543.Exig_2281(PF13518)
262543.Exig_0510(PF13936)
262543.Exig_1113(PF12323)
262543.Exig_0184(PF14328)
262543.Exig_0984(PF13936)
262543.Exig_0763(PF09419)
262543.Exig_0549(PF13518)
262543.Exig_1374(PF13539)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================