Metamenu

Effective results for Anaeromyxobacter dehalogenans 2CP-C (eggnog40)

Summary

Number of putative secreted proteins: 184
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 43 eukaryotic-like domains, contained in 184 proteins (15 high, 169 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
290397.Adeh_2523(PF00675) (PF05193)ER
290397.Adeh_0102(PF00675) (PF05193)ER
290397.Adeh_0103(PF00675) (PF05193)ER
290397.Adeh_0298(PF00675) (PF05193)ER
290397.Adeh_0357(PF00158) (PF02954)(mitochondrial)
290397.Adeh_3381(PF00675) (PF05193)ER
290397.Adeh_2814(PF06245)mitochondrial
290397.Adeh_2104(PF05140)(ER)
290397.Adeh_2032(PF13432)ER
290397.Adeh_4345(PF13432)ER
290397.Adeh_1906(PF13432)(ER); (plastid)
290397.Adeh_3415(PF13432)ER
290397.Adeh_3316PF14008ER
290397.Adeh_1817(PF01744)ER
290397.Adeh_1819(PF03169)ER
290397.Adeh_3091(PF00158) (PF02954)(ER)
290397.Adeh_3432(PF03147) (PF01409)(mitochondrial)
290397.Adeh_0337PF04885ER
290397.Adeh_3336(PF13432)ER
290397.Adeh_1301(PF13432)ER
290397.Adeh_3321(PF13432)ER
290397.Adeh_3322(PF13432)ER
290397.Adeh_1209(PF13432)ER
290397.Adeh_0237(PF13432)ER
290397.Adeh_3463PF04885ER
290397.Adeh_4119(PF01597)(ER)
290397.Adeh_1699(PF06176)mitochondrial
290397.Adeh_2505PF13320ER
290397.Adeh_0377(PF00675) (PF05193)(mitochondrial)
290397.Adeh_0596PF10712ER
290397.Adeh_2194(PF05140)ER
290397.Adeh_3648(PF13432)ER
290397.Adeh_4263(PF09752)(ER); ER
290397.Adeh_2453(PF06245)(mitochondrial)
290397.Adeh_3076(PF13432)ER
290397.Adeh_4149(PF07994)mitochondrial
290397.Adeh_1535(PF07994)ER; (mitochondrial)
290397.Adeh_0137(PF13432)ER
290397.Adeh_1523(PF13432)ER
290397.Adeh_2472PF13320ER
290397.Adeh_2723(PF13432)mitochondrial; ER
290397.Adeh_2003(PF01597)ER
290397.Adeh_3738(PF16561)ER
290397.Adeh_4085PF13320mitochondrial; (mitochondrial)
290397.Adeh_1478(PF00158) (PF02954)
290397.Adeh_0417(PF00158) (PF02954)
290397.Adeh_1276(PF00158) (PF02954)
290397.Adeh_2253(PF00158) (PF02954)
290397.Adeh_2101(PF00158) (PF02954)
290397.Adeh_3729(PF00158) (PF02954)
290397.Adeh_1450(PF00158) (PF02954)
290397.Adeh_0504(PF00158) (PF02954)
290397.Adeh_1055(PF00158) (PF02954)
290397.Adeh_1908(PF00158) (PF02954)
290397.Adeh_2688(PF13432) (PF13428)
290397.Adeh_2968(PF08326)(plastid)
290397.Adeh_1326(PF00158) (PF02954)
290397.Adeh_0338(PF00158) (PF02954)
290397.Adeh_1555(PF00158) (PF02954)
290397.Adeh_0688(PF00158) (PF02954)
290397.Adeh_3338(PF00158) (PF02954)
290397.Adeh_0302(PF00158) (PF02954)
290397.Adeh_0833(PF00158) (PF02954)
290397.Adeh_0169(PF13432)(mitochondrial)
290397.Adeh_4250(PF00158) (PF02954)
290397.Adeh_1758(PF00158) (PF02954)
290397.Adeh_1992(PF00158) (PF02954)
290397.Adeh_4240(PF00158) (PF02954)
290397.Adeh_0812(PF00158) (PF02954)
290397.Adeh_0615(PF13432) (PF01739)
290397.Adeh_0106(PF00158) (PF02954)
290397.Adeh_3471(PF00158) (PF02954)
290397.Adeh_0576(PF00675) (PF05193)
290397.Adeh_0975(PF00158) (PF02954)
290397.Adeh_2239(PF00158) (PF02954)
290397.Adeh_0639(PF00158) (PF02954)
290397.Adeh_3651(PF00158) (PF02954)
290397.Adeh_1401(PF00158) (PF02954)
290397.Adeh_1399(PF00158) (PF02954)
290397.Adeh_0626(PF00158) (PF02954)
290397.Adeh_1711(PF00158) (PF02954)
290397.Adeh_1866(PF00675) (PF05193)
290397.Adeh_1867(PF00675) (PF05193)
290397.Adeh_0922(PF00158) (PF02954)
290397.Adeh_2651(PF00158) (PF02954)
290397.Adeh_1603(PF13432)(plastid)
290397.Adeh_2009(PF00158) (PF02954)
290397.Adeh_2132(PF00158) (PF02954)
290397.Adeh_0092(PF01814)
290397.Adeh_1610(PF00154)
290397.Adeh_1104(PF02033)
290397.Adeh_3033(PF00012)
290397.Adeh_3617(PF00154)
290397.Adeh_0243(PF03169)
290397.Adeh_0888(PF13432)
290397.Adeh_2167(PF01814)
290397.Adeh_3191(PF01814)
290397.Adeh_3199(PF00158)
290397.Adeh_3570(PF04519)
290397.Adeh_3571(PF04519)
290397.Adeh_4353(PF04519)
290397.Adeh_4191(PF13432)
290397.Adeh_0873(PF13428)
290397.Adeh_3965(PF07766)
290397.Adeh_2839PF04406
290397.Adeh_1580(PF00012)
290397.Adeh_3982PF14360
290397.Adeh_3183(PF01739)
290397.Adeh_2165(PF04519)
290397.Adeh_2588(PF00012)
290397.Adeh_3364(PF13432)
290397.Adeh_3964(PF00154)
290397.Adeh_3564(PF13432)
290397.Adeh_4328(PF00012)
290397.Adeh_0866PF04885
290397.Adeh_1807(PF00012)
290397.Adeh_2350(PF00012)
290397.Adeh_2594(PF01875)
290397.Adeh_3954(PF01739)
290397.Adeh_2689(PF00012)
290397.Adeh_3791(PF02954)
290397.Adeh_3552(PF04098)
290397.Adeh_4331(PF13432)
290397.Adeh_0219(PF01814)
290397.Adeh_3308(PF01875)
290397.Adeh_2793(PF13428)
290397.Adeh_3333(PF13432)
290397.Adeh_3334(PF00158)
290397.Adeh_0941(PF14721)
290397.Adeh_1549(PF00012)
290397.Adeh_2941(PF01739)
290397.Adeh_1165(PF03015)
290397.Adeh_2307(PF01597)
290397.Adeh_3922PF12349
290397.Adeh_4100(PF01814)
290397.Adeh_0006PF07998
290397.Adeh_1371(PF01739)
290397.Adeh_1972(PF01409)
290397.Adeh_1971(PF03147)
290397.Adeh_1196(PF01739)
290397.Adeh_3046(PF01814)
290397.Adeh_3688(PF13432)
290397.Adeh_3032(PF00012)
290397.Adeh_1562(PF02954)
290397.Adeh_0814(PF05140)
290397.Adeh_1690(PF00477)
290397.Adeh_1968(PF02954)
290397.Adeh_0575(PF01814)
290397.Adeh_0597(PF00012)
290397.Adeh_0601(PF01739)
290397.Adeh_2998(PF01814)
290397.Adeh_3643(PF01142)
290397.Adeh_3481(PF13432)
290397.Adeh_0632(PF13432)
290397.Adeh_2858PF07998
290397.Adeh_1655(PF13432)
290397.Adeh_3810(PF13432)
290397.Adeh_0350(PF02033)
290397.Adeh_1536(PF00012)
290397.Adeh_1404(PF01814)
290397.Adeh_1402(PF01814)
290397.Adeh_1244(PF01597)
290397.Adeh_2840PF09239
290397.Adeh_0383(PF01814)
290397.Adeh_1382(PF01739)
290397.Adeh_0651(PF13432)
290397.Adeh_1676(PF05189)
290397.Adeh_1870(PF05761)
290397.Adeh_2010PF07998
290397.Adeh_3017(PF01814)
290397.Adeh_3016(PF01814)
290397.Adeh_3633(PF00025)
290397.Adeh_0425(PF13432)
290397.Adeh_4092(PF03169)
290397.Adeh_2261(PF00012)
290397.Adeh_1607(PF02954)
290397.Adeh_2395(PF13432)
290397.Adeh_2005(PF01597)
290397.Adeh_2485(PF00477)
290397.Adeh_2489(PF01142)
290397.Adeh_2133(PF01814)
290397.Adeh_3736(PF16561)
290397.Adeh_2731(PF01739)
290397.Adeh_3512(PF01814)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================