Effective results for Lactobacillus sakei subsp. sakei 23K (eggnog40)
Summary
Number of putative secreted proteins: 23
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 23 proteins (0 high, 23 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
314315.LSA1624 | (PF06736) | ER | |||
314315.LSA1833 | (PF06736) | (ER) | |||
314315.LSA0584 | (PF03577) | (mitochondrial) | |||
314315.LSA1847 | (PF06736) | ER | |||
314315.LSA0090 | (PF05935) | ER | |||
314315.LSA1820 | (PF00139) | ER | |||
314315.LSA1578 | (PF05704) | (plastid) | |||
314315.LSA1510_f | (PF01501) | ||||
314315.LSA1688 | (PF03051) | ||||
314315.LSA0162 | (PF01501) | ||||
314315.LSA0179 | (PF03577) | ||||
314315.LSA0786 | (PF01969) | ||||
314315.LSA0787 | (PF01969) | ||||
314315.LSA0897 | (PF03577) | ||||
314315.LSA0091 | (PF05935) | ||||
314315.LSA1686 | (PF03051) | ||||
314315.LSA1687 | (PF03051) | not used | |||
314315.LSA0320 | (PF03577) | ||||
314315.LSA0508 | (PF05014) | ||||
314315.LSA1474 | (PF01501) | ||||
314315.LSA0196 | (PF03577) | ||||
314315.LSA1481 | (PF05014) | ||||
314315.LSA1168 | (PF05014) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)