Effective results for Thermoanaerobacter pseudethanolicus ATCC 33223 (eggnog40)

Summary

Number of putative secreted proteins: 65
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 65 proteins (4 high, 61 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
340099.Teth39_1573(PF06695)(ER)
340099.Teth39_1252PF16808(ER)
340099.Teth39_1591(PF06695)(ER)
340099.Teth39_1580PF08433ER; not used
340099.Teth39_1836(PF07837) (PF02971)
340099.Teth39_2262(PF01991)
340099.Teth39_0128(PF02371)
340099.Teth39_0129(PF02371)
340099.Teth39_0126(PF02371)
340099.Teth39_0127(PF02371)
340099.Teth39_0631(PF13401)
340099.Teth39_0254PF06888
340099.Teth39_1385(PF13936)
340099.Teth39_0138(PF00078)
340099.Teth39_0131(PF02371)
340099.Teth39_0130(PF02371)
340099.Teth39_1869(PF13401)
340099.Teth39_1717(PF00731)
340099.Teth39_0097(PF00078)
340099.Teth39_0658(PF13936)
340099.Teth39_2209(PF00078)
340099.Teth39_1606(PF09664)
340099.Teth39_0887(PF00078)
340099.Teth39_0219(PF13936)
340099.Teth39_0523(PF00078)
340099.Teth39_0456(PF02371)
340099.Teth39_2033(PF00078)
340099.Teth39_2034(PF13401)
340099.Teth39_2037(PF00078)
340099.Teth39_2211(PF00078)
340099.Teth39_0680(PF07085)
340099.Teth39_0997(PF02371)
340099.Teth39_2206(PF13401)
340099.Teth39_0847(PF13936)
340099.Teth39_0058(PF13401)
340099.Teth39_1802(PF00731)
340099.Teth39_0049(PF00078)
340099.Teth39_0148(PF13936)
340099.Teth39_0149(PF00078)
340099.Teth39_1868(PF00078)
340099.Teth39_1564(PF09664)
340099.Teth39_0242(PF01880)
340099.Teth39_0499(PF13936)
340099.Teth39_0961(PF00078)
340099.Teth39_1778(PF03161)
340099.Teth39_1510(PF02371)
340099.Teth39_0163(PF00078)
340099.Teth39_1766(PF00078)
340099.Teth39_1430(PF00078)
340099.Teth39_0255(PF07085)
340099.Teth39_0173(PF13936)
340099.Teth39_0594(PF02371)
340099.Teth39_1539(PF00731)
340099.Teth39_0914(PF02371)
340099.Teth39_0723PF00514
340099.Teth39_1418(PF13401)
340099.Teth39_0113(PF02371)
340099.Teth39_0422(PF13401)
340099.Teth39_0429(PF01880)
340099.Teth39_1465(PF07085)
340099.Teth39_1462(PF07085)
340099.Teth39_2045(PF02371)
340099.Teth39_2044(PF13936)
340099.Teth39_2047(PF13401)
340099.Teth39_0932(PF13936)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================