Metamenu

Effective results for Octadecabacter antarcticus 307 (eggnog40)

Summary

Number of putative secreted proteins: 486
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 36 eukaryotic-like domains, contained in 486 proteins (325 high, 161 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
391626.OA307_5007PF05598 (PF01609)ER
391626.OA307_2817PF00665 PF13276(mitochondrial)
391626.OA307_2681PF00665 PF13276(mitochondrial)
391626.OA307_4118PF00665 PF13276ER
391626.OA307_3583PF00665 PF13936(mitochondrial)
391626.OA307_4369PF00665 PF13276(mitochondrial)
391626.OA307_3222(PF00589)mitochondrial; (mitochondrial)
391626.OA307_327(PF00950)ER; (ER)
391626.OA307_5191(PF00589)mitochondrial; (mitochondrial)
391626.OA307_4808PF13276(mitochondrial)
391626.OA307_3777PF00665mitochondrial
391626.OA307_4866(PF16350)mitochondrial
391626.OA307_3436PF02371(mitochondrial)
391626.OA307_2446(PF16350)ER
391626.OA307_5465PF05598(mitochondrial)
391626.OA307_5133PF00665 PF13683 PF13276
391626.OA307_146(PF00950)ER
391626.OA307_3880PF13276mitochondrial; (mitochondrial)
391626.OA307_3864(PF00589)(mitochondrial)
391626.OA307_743PF12762mitochondrial
391626.OA307_75(PF01609)mitochondrial
391626.OA307_77PF12762mitochondrial
391626.OA307_105PF00665mitochondrial
391626.OA307_3678(PF16350)ER
391626.OA307_5096PF02371ER
391626.OA307_4948(PF00589)ER
391626.OA307_4291PF00665mitochondrial
391626.OA307_442(PF04172)ER
391626.OA307_4011(PF01609)(mitochondrial)
391626.OA307_4015PF00665mitochondrial
391626.OA307_2534PF13683(ER)
391626.OA307_4780PF13276mitochondrial; (mitochondrial)
391626.OA307_4023PF01527mitochondrial
391626.OA307_2047PF13276mitochondrial; (mitochondrial)
391626.OA307_1546PF13276mitochondrial; (mitochondrial)
391626.OA307_3081(PF04172)ER
391626.OA307_2064PF13276mitochondrial
391626.OA307_613PF00665mitochondrial
391626.OA307_4157(PF13664)ER
391626.OA307_3048(PF04172)ER
391626.OA307_96(PF10067)(ER)
391626.OA307_1131PF02371ER
391626.OA307_638(PF00950)ER
391626.OA307_3955PF13936(mitochondrial)
391626.OA307_1287PF00665(ER)
391626.OA307_1423PF12762mitochondrial
391626.OA307_3397(PF00589)(mitochondrial)
391626.OA307_3001PF13276(mitochondrial)
391626.OA307_2604(PF08547)ER
391626.OA307_3915PF00665(mitochondrial)
391626.OA307_3218(PF01695)ER
391626.OA307_4410PF13276(mitochondrial)
391626.OA307_1441PF13276(mitochondrial)
391626.OA307_2333(PF05706)(mitochondrial)
391626.OA307_2594PF13276mitochondrial; (mitochondrial)
391626.OA307_1156PF00665(mitochondrial)
391626.OA307_5107PF13276(mitochondrial)
391626.OA307_3996(PF13664)ER
391626.OA307_5430PF13148ER
391626.OA307_3812PF13683 PF00665 PF13276
391626.OA307_4009(PF10067)(ER); ER
391626.OA307_3362PF00665mitochondrial
391626.OA307_4939PF13276mitochondrial; (mitochondrial)
391626.OA307_1680PF13276(mitochondrial)
391626.OA307_4479PF00665mitochondrial
391626.OA307_193PF12762(mitochondrial)
391626.OA307_5028PF12762ER
391626.OA307_1944(PF00589)(mitochondrial)
391626.OA307_1030(PF09834)ER
391626.OA307_2249PF00665(mitochondrial)
391626.OA307_2658PF00665 PF13936(mitochondrial)
391626.OA307_5387PF02371(mitochondrial)
391626.OA307_2036PF13276mitochondrial; (mitochondrial)
391626.OA307_3017(PF10067)ER
391626.OA307_669(PF00589)mitochondrial; (mitochondrial)
391626.OA307_1476PF00665 PF13276
391626.OA307_1643PF02371(mitochondrial)
391626.OA307_4121(PF09834)(ER)
391626.OA307_1985PF02371(mitochondrial)
391626.OA307_4661PF02371(mitochondrial); not used
391626.OA307_4321PF13936(mitochondrial)
391626.OA307_4860PF13683(mitochondrial)
391626.OA307_1497PF02371(mitochondrial)
391626.OA307_3184PF02371(mitochondrial)
391626.OA307_4987(PF13565) PF00665
391626.OA307_4571PF02371(mitochondrial)
391626.OA307_4969PF02371(mitochondrial)
391626.OA307_803(PF00950)(ER)
391626.OA307_3820PF13683(mitochondrial)
391626.OA307_2199(PF13565) PF00665
391626.OA307_35PF01527(mitochondrial); not used
391626.OA307_2694PF02371(mitochondrial)
391626.OA307_2767(PF13438) (PF00817)
391626.OA307_1528(PF13565) PF00665
391626.OA307_2822PF12762(ER)
391626.OA307_2563PF05598 (PF01609)
391626.OA307_423(PF00589)(mitochondrial)
391626.OA307_842PF01527 PF00665
391626.OA307_3316PF00665 PF13276
391626.OA307_1549PF00665 PF13276
391626.OA307_4026(PF13565) PF00665
391626.OA307_1568PF00665 PF13936
391626.OA307_3532(PF16350)(ER)
391626.OA307_2001(PF13565) PF00665
391626.OA307_946PF05598(plastid)
391626.OA307_2830(PF13565) PF00665
391626.OA307_4231PF00665 PF13276
391626.OA307_4092PF00665 PF13276
391626.OA307_3049(PF00589)(plastid)
391626.OA307_5162(PF00589) (PF04172)
391626.OA307_639(PF13565) PF00665
391626.OA307_4172PF00665 PF13276
391626.OA307_1127PF00665 PF13276
391626.OA307_489PF00665 PF13276
391626.OA307_1001PF02371(mitochondrial)
391626.OA307_1656PF00665 PF13276
391626.OA307_1463PF00665 PF13936
391626.OA307_3689PF02371(mitochondrial)
391626.OA307_2082(PF13481)(mitochondrial)
391626.OA307_4336PF13683 PF13276
391626.OA307_1670PF02371(mitochondrial)
391626.OA307_2418PF00665 PF13276
391626.OA307_4672PF00665 PF13276
391626.OA307_4876PF13683(mitochondrial)
391626.OA307_713PF05598 (PF01609)
391626.OA307_4991PF00665 PF13276
391626.OA307_587PF05598 (PF01609)
391626.OA307_4733(PF13438) (PF00817)
391626.OA307_1152(PF00589)(mitochondrial)
391626.OA307_63PF00665 PF13276
391626.OA307_2110PF00665 PF13276
391626.OA307_110(PF13565) PF00665
391626.OA307_2385PF00665 PF13276
391626.OA307_3663PF00665 PF13936
391626.OA307_5086PF12762(ER)
391626.OA307_793PF00665 PF13276
391626.OA307_20PF02371(mitochondrial)
391626.OA307_24PF02371(mitochondrial)
391626.OA307_3586PF01527(mitochondrial); not used
391626.OA307_2572(PF13565) PF00665
391626.OA307_3540(PF13565) PF00665
391626.OA307_4459(PF00589)(mitochondrial)
391626.OA307_4205PF13936(mitochondrial)
391626.OA307_4087(PF13565) PF00665
391626.OA307_3260(PF02485)(plastid)
391626.OA307_932PF00665 PF13276
391626.OA307_3223PF05598
391626.OA307_3220(PF00872)
391626.OA307_494PF02371
391626.OA307_4641(PF01609)
391626.OA307_2343(PF04519)
391626.OA307_3962PF01527
391626.OA307_5344PF02371
391626.OA307_1861PF13683
391626.OA307_1642(PF00589)
391626.OA307_1641(PF00589)
391626.OA307_683(PF01695)
391626.OA307_4129PF13683
391626.OA307_3542(PF01609)
391626.OA307_3752(PF13481)
391626.OA307_2403PF02371
391626.OA307_1189(PF09458)
391626.OA307_1459PF02371
391626.OA307_4665PF02371
391626.OA307_223(PF00872)
391626.OA307_2363PF01527
391626.OA307_2364(PF01165)
391626.OA307_2368(PF13704)
391626.OA307_3948(PF00589)
391626.OA307_3893PF13683not used
391626.OA307_2097PF05598
391626.OA307_2547PF00665
391626.OA307_2898(PF00589)
391626.OA307_3775(PF13704)
391626.OA307_2429PF13683
391626.OA307_2428PF13683
391626.OA307_4862(PF01165)
391626.OA307_2303PF12762
391626.OA307_1953(PF13704)
391626.OA307_3431(PF00872)
391626.OA307_5300PF01527
391626.OA307_538PF01527
391626.OA307_535PF02371
391626.OA307_1825PF02371
391626.OA307_1821(PF02485)
391626.OA307_880PF13683
391626.OA307_5215PF01527
391626.OA307_4895PF13683
391626.OA307_5216(PF13551)
391626.OA307_2449PF13148
391626.OA307_3453(PF00589)
391626.OA307_2855PF12762
391626.OA307_4183PF01527
391626.OA307_4722PF13936
391626.OA307_4724PF05598
391626.OA307_767PF13683
391626.OA307_762(PF10067)
391626.OA307_4532(PF00589)
391626.OA307_3613(PF16350)
391626.OA307_2871PF05598
391626.OA307_2873(PF00589)
391626.OA307_2875PF13683
391626.OA307_3472(PF00589)
391626.OA307_2701PF12762
391626.OA307_1759PF01527
391626.OA307_3287PF01527
391626.OA307_3868PF13936not used
391626.OA307_5421PF13683
391626.OA307_294(PF00589)
391626.OA307_292(PF13481)
391626.OA307_291PF05598
391626.OA307_5138PF13683
391626.OA307_79PF12762
391626.OA307_4944PF02371
391626.OA307_1739(PF08547)
391626.OA307_827PF13148
391626.OA307_56PF02371
391626.OA307_4570PF13683
391626.OA307_1387PF00665
391626.OA307_1381PF01527
391626.OA307_5417PF01527
391626.OA307_3200PF01527
391626.OA307_2528(PF01609)
391626.OA307_2296(PF01695)
391626.OA307_4960PF02371
391626.OA307_466(PF00589)
391626.OA307_4297PF13683
391626.OA307_4295PF01527
391626.OA307_4290PF13276
391626.OA307_2835(PF01609)
391626.OA307_3825PF13683
391626.OA307_2192PF12762
391626.OA307_1856(PF00872)
391626.OA307_2924PF02371
391626.OA307_3109PF05598
391626.OA307_1889(PF00589)
391626.OA307_1881PF05598
391626.OA307_2503PF02371
391626.OA307_1089PF13683
391626.OA307_441PF12762
391626.OA307_866PF01527
391626.OA307_3596PF00665
391626.OA307_273PF00665
391626.OA307_2972(PF00872)
391626.OA307_2974PF12762
391626.OA307_1529PF02371
391626.OA307_4465PF13683
391626.OA307_2285PF01527not used
391626.OA307_3786PF13683
391626.OA307_4927(PF00589)
391626.OA307_1207PF01527
391626.OA307_5251PF05598
391626.OA307_4254PF00665
391626.OA307_4073(PF00817)
391626.OA307_4788(PF08547)
391626.OA307_3571PF00665
391626.OA307_2958PF01527
391626.OA307_2048(PF01609)
391626.OA307_1544PF02371
391626.OA307_987(PF04519)
391626.OA307_3145(PF13551)
391626.OA307_3942PF00665
391626.OA307_5019(PF16350)
391626.OA307_1044PF01527
391626.OA307_1045PF05551
391626.OA307_4275PF05598
391626.OA307_236(PF00589)
391626.OA307_4421PF05598
391626.OA307_2910PF01527not used
391626.OA307_393(PF01609)
391626.OA307_5077PF02371
391626.OA307_4217PF01527
391626.OA307_4212PF00665
391626.OA307_4213(PF01695)
391626.OA307_4210(PF00589)
391626.OA307_1798PF13683
391626.OA307_617PF00665
391626.OA307_619PF00665
391626.OA307_4405PF02371
391626.OA307_3340(PF00817)not used
391626.OA307_5282PF13683
391626.OA307_5283PF00665
391626.OA307_2837PF13276
391626.OA307_2273(PF00589)
391626.OA307_2270(PF01609)
391626.OA307_2271(PF00589)
391626.OA307_4750PF13683
391626.OA307_1715(PF01609)
391626.OA307_1914(PF01609)
391626.OA307_4096PF02371
391626.OA307_4098(PF13704)
391626.OA307_4099PF00665
391626.OA307_2028(PF03098)
391626.OA307_4399PF02371
391626.OA307_630PF13936not used
391626.OA307_636(PF00872)
391626.OA307_1931PF02371
391626.OA307_1281PF13683
391626.OA307_4617(PF01695)
391626.OA307_3063PF13683not used
391626.OA307_3067PF05598
391626.OA307_3069(PF13438)
391626.OA307_4743(PF00950)
391626.OA307_3396PF01527
391626.OA307_2627PF00665
391626.OA307_3934PF12762
391626.OA307_3054(PF00589)
391626.OA307_5390(PF00872)
391626.OA307_4119PF13683
391626.OA307_4116PF00665
391626.OA307_3729(PF00817)
391626.OA307_484(PF01609)
391626.OA307_1407PF13683
391626.OA307_3006PF01527
391626.OA307_2357PF12762
391626.OA307_3911PF02371
391626.OA307_3912(PF00589)
391626.OA307_5377PF00665not used
391626.OA307_1650(PF00872)
391626.OA307_1659PF02371
391626.OA307_678(PF13481)
391626.OA307_4135PF13683not used
391626.OA307_924(PF00589)
391626.OA307_313(PF13481)
391626.OA307_315(PF01609)
391626.OA307_3741(PF01695)
391626.OA307_3126PF13683not used
391626.OA307_4838(PF00872)
391626.OA307_4833(PF00589)
391626.OA307_4414PF05598
391626.OA307_4140(PF01609)
391626.OA307_4655PF13683
391626.OA307_3022PF00665
391626.OA307_2376(PF16350)
391626.OA307_3970(PF00872)
391626.OA307_2888PF13683
391626.OA307_2880(PF01609)
391626.OA307_1858PF13683
391626.OA307_697(PF10013)
391626.OA307_696PF01527
391626.OA307_3761(PF13551)
391626.OA307_3760(PF00589)
391626.OA307_1990PF02371
391626.OA307_4818PF05598
391626.OA307_1447PF13683
391626.OA307_5406PF00665
391626.OA307_4675PF13683
391626.OA307_4677PF13683
391626.OA307_3408PF12762
391626.OA307_3959PF02371
391626.OA307_5339PF13683
391626.OA307_2645PF02371
391626.OA307_2(PF00872)
391626.OA307_7PF01527
391626.OA307_2120PF13683
391626.OA307_2430(PF13438)
391626.OA307_2432(PF00589)
391626.OA307_2437PF01527
391626.OA307_5472PF01527not used
391626.OA307_4878PF13683
391626.OA307_1311(PF01609)
391626.OA307_4692PF05598
391626.OA307_4696PF13276
391626.OA307_4694PF13683
391626.OA307_4695PF13683
391626.OA307_2336PF01527
391626.OA307_3427PF12762
391626.OA307_2598PF02371
391626.OA307_1768PF02371
391626.OA307_3855(PF00872)
391626.OA307_3856PF13148
391626.OA307_2459PF01527
391626.OA307_5452PF13683
391626.OA307_4851(PF01695)
391626.OA307_776PF13683
391626.OA307_1480PF01527
391626.OA307_3628(PF01695)
391626.OA307_2413PF13683
391626.OA307_3997PF13683
391626.OA307_4718PF05598
391626.OA307_3879PF02371
391626.OA307_5124(PF03098)
391626.OA307_1354(PF00589)
391626.OA307_111PF05598
391626.OA307_3606PF12762
391626.OA307_3608PF02371
391626.OA307_3461PF02371
391626.OA307_2730PF13683
391626.OA307_2738PF00665
391626.OA307_1727PF01527
391626.OA307_1723PF05598
391626.OA307_1495PF02371
391626.OA307_1115(PF04519)
391626.OA307_134PF01527
391626.OA307_3482(PF00589)
391626.OA307_3483PF00665
391626.OA307_2751PF02371
391626.OA307_4970PF01527
391626.OA307_1709(PF01165)
391626.OA307_4759PF01527
391626.OA307_839(PF09458)
391626.OA307_1284PF13276
391626.OA307_1283PF01527
391626.OA307_1139PF00665
391626.OA307_27PF12762
391626.OA307_4565(PF04519)
391626.OA307_1390(PF01695)
391626.OA307_1392PF05598
391626.OA307_3642PF01527
391626.OA307_2513PF02371
391626.OA307_2511PF05598
391626.OA307_2776PF01527
391626.OA307_4916(PF01695)
391626.OA307_5207PF01527
391626.OA307_5208PF12762
391626.OA307_1279PF00665
391626.OA307_473PF13683
391626.OA307_475PF12762
391626.OA307_4003PF01527
391626.OA307_3987(PF00872)
391626.OA307_2582PF00665
391626.OA307_2100(PF00589)
391626.OA307_2103PF13683
391626.OA307_2576(PF01165)
391626.OA307_4249(PF00817)
391626.OA307_3308PF01527not used
391626.OA307_1681PF00665
391626.OA307_1684PF13683
391626.OA307_1685PF00665
391626.OA307_997PF02371
391626.OA307_4477PF00665
391626.OA307_3178(PF00872)
391626.OA307_3790PF00665
391626.OA307_2558PF13683
391626.OA307_2556PF13683
391626.OA307_1057PF05598
391626.OA307_1054(PF01695)
391626.OA307_5027PF13683
391626.OA307_431PF01527not used
391626.OA307_4267(PF01695)
391626.OA307_4040PF01527
391626.OA307_4045PF02371
391626.OA307_3549PF01527
391626.OA307_2966PF01527
391626.OA307_2945(PF00817)
391626.OA307_2946(PF01695)
391626.OA307_2050(PF00589)
391626.OA307_1032(PF00950)
391626.OA307_414(PF00872)
391626.OA307_4203PF13683
391626.OA307_5260(PF14566)
391626.OA307_3523PF01527
391626.OA307_2921(PF01609)
391626.OA307_2070PF01527
391626.OA307_2076PF13936not used
391626.OA307_2869PF13683
391626.OA307_2861PF01527
391626.OA307_1576PF01527not used
391626.OA307_5440(PF00589)
391626.OA307_1014(PF00589)
391626.OA307_3059PF13148
391626.OA307_3057PF13683
391626.OA307_2905(PF00589)
391626.OA307_2900PF00665
391626.OA307_1592PF12762
391626.OA307_626(PF00589)
391626.OA307_2246PF13683
391626.OA307_5049PF12762
391626.OA307_1435PF12762
391626.OA307_4607(PF13704)
391626.OA307_3076PF05598
391626.OA307_3075(PF13551)
391626.OA307_2387PF13276
391626.OA307_1600(PF01786)
391626.OA307_4162(PF03098)
391626.OA307_910(PF01786)
391626.OA307_919PF05598
391626.OA307_346PF01527
391626.OA307_1416PF00665
391626.OA307_1415(PF00872)
391626.OA307_4593(PF00589)
391626.OA307_2636PF13683
391626.OA307_1941(PF01695)
391626.OA307_4366(PF00589)
391626.OA307_1625PF00665
391626.OA307_1114PF13683

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================