Metamenu

Effective results for Eubacterium ventriosum ATCC 27560 (eggnog40)

Summary

Number of putative secreted proteins: 117
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 31 eukaryotic-like domains, contained in 117 proteins (33 high, 84 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
411463.EUBVEN_01088PF02368 (PF13306)ER
411463.EUBVEN_00982(PF13290) PF03639(ER); (mitochondrial)
411463.EUBVEN_02826(PF00041) PF11790ER
411463.EUBVEN_02638(PF00041) (PF13306)ER
411463.EUBVEN_02190(PF00209)(ER)
411463.EUBVEN_01798(PF13306)ER
411463.EUBVEN_00501(PF00112)ER
411463.EUBVEN_01418PF02368ER
411463.EUBVEN_02276PF02368ER
411463.EUBVEN_01399PF02368ER
411463.EUBVEN_02601PF02368 PF03639(mitochondrial)
411463.EUBVEN_02268(PF00041)ER
411463.EUBVEN_01470(PF00041)ER
411463.EUBVEN_02654(PF13306)ER
411463.EUBVEN_02073PF02368ER
411463.EUBVEN_02072PF02368(ER)
411463.EUBVEN_02831PF11790ER
411463.EUBVEN_02830PF11790ER
411463.EUBVEN_02069(PF05738)ER
411463.EUBVEN_00091PF02368ER
411463.EUBVEN_00090PF02368ER
411463.EUBVEN_01704(PF05738)ER
411463.EUBVEN_01057PF02368ER
411463.EUBVEN_02653PF02368ER
411463.EUBVEN_02655(PF00209)(ER)
411463.EUBVEN_01605(PF00137)ER
411463.EUBVEN_01603(PF01992)(mitochondrial)
411463.EUBVEN_02829PF11790ER
411463.EUBVEN_01933(PF00834)(mitochondrial)
411463.EUBVEN_01032(PF13306)ER
411463.EUBVEN_02104(PF06541)ER
411463.EUBVEN_02694(PF00137)(ER)
411463.EUBVEN_01726(PF13306)ER
411463.EUBVEN_01923(PF00137)ER
411463.EUBVEN_01927(PF13306)ER
411463.EUBVEN_00192PF03639mitochondrial; (mitochondrial)
411463.EUBVEN_00536PF02368ER
411463.EUBVEN_00336(PF00209)ER
411463.EUBVEN_01005(PF06541)ER
411463.EUBVEN_01555PF02368ER; (ER)
411463.EUBVEN_01832(PF00112)ER
411463.EUBVEN_00946PF02368ER
411463.EUBVEN_02735PF03639ER
411463.EUBVEN_02824(PF00041)ER
411463.EUBVEN_01371PF02368ER
411463.EUBVEN_01976(PF00041)ER
411463.EUBVEN_00564(PF05738)ER
411463.EUBVEN_00567PF02368ER
411463.EUBVEN_01215PF02368ER
411463.EUBVEN_00776(PF05738)mitochondrial
411463.EUBVEN_01687PF02368ER
411463.EUBVEN_01170(PF05698)ER
411463.EUBVEN_01176(PF00041)ER; (ER)
411463.EUBVEN_02211PF02368ER
411463.EUBVEN_02083(PF00041)ER
411463.EUBVEN_00165(PF00041)ER
411463.EUBVEN_01430PF02368ER
411463.EUBVEN_01344(PF13306)ER
411463.EUBVEN_01343(PF13306)ER
411463.EUBVEN_01340(PF13306)ER
411463.EUBVEN_01341(PF13306)ER
411463.EUBVEN_02639PF02368ER
411463.EUBVEN_02634PF02368ER
411463.EUBVEN_02455(PF13306)ER
411463.EUBVEN_00750(PF05738)(ER)
411463.EUBVEN_01757(PF05738)(mitochondrial)
411463.EUBVEN_02048(PF00041)(ER)
411463.EUBVEN_01477(PF04422) (PF04432)
411463.EUBVEN_02675(PF00041) PF02368
411463.EUBVEN_02643(PF00209)(ER)
411463.EUBVEN_01941(PF13290) PF02368
411463.EUBVEN_00369(PF06541)(ER)
411463.EUBVEN_02298(PF03054)
411463.EUBVEN_02055(PF03054)
411463.EUBVEN_02613(PF13151)
411463.EUBVEN_00634(PF13290)
411463.EUBVEN_01655(PF05063)
411463.EUBVEN_01864(PF14622)
411463.EUBVEN_00407(PF05698)
411463.EUBVEN_01661(PF14022)
411463.EUBVEN_01660(PF14022)
411463.EUBVEN_01043(PF00041)
411463.EUBVEN_01285(PF14622)
411463.EUBVEN_02805(PF01795)
411463.EUBVEN_02801(PF00834)
411463.EUBVEN_01916(PF01813)
411463.EUBVEN_01919(PF01990)
411463.EUBVEN_01918(PF16886)
411463.EUBVEN_01676(PF03432)
411463.EUBVEN_01455(PF03054)
411463.EUBVEN_02238(PF08271)
411463.EUBVEN_01607(PF01991)
411463.EUBVEN_01606(PF01990)
411463.EUBVEN_01604(PF01496)
411463.EUBVEN_01608(PF16886)
411463.EUBVEN_02133(PF00209)
411463.EUBVEN_01610(PF01813)
411463.EUBVEN_00329(PF05698)
411463.EUBVEN_02362(PF00041)
411463.EUBVEN_01920(PF01992)
411463.EUBVEN_01921(PF01991)
411463.EUBVEN_01924(PF01496)
411463.EUBVEN_00196(PF01795)
411463.EUBVEN_00204PF02368
411463.EUBVEN_01483(PF04422)
411463.EUBVEN_01482(PF04432)
411463.EUBVEN_00769(PF03432)
411463.EUBVEN_00365(PF02938)
411463.EUBVEN_01140(PF02938)
411463.EUBVEN_02146(PF14311)
411463.EUBVEN_00575(PF03432)
411463.EUBVEN_00011(PF03432)
411463.EUBVEN_00743(PF05063)
411463.EUBVEN_01183(PF13306)
411463.EUBVEN_01505PF02368
411463.EUBVEN_00005(PF03432)not used
411463.EUBVEN_01532(PF00834)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================