Metamenu

Effective results for Candidatus Amoebophilus asiaticus 5a2 (eggnog40)

Summary

Number of putative secreted proteins: 216
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 23 eukaryotic-like domains, contained in 216 proteins (196 high, 20 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
452471.Aasi_0340PF13606 PF00023 PF12796 PF08238ER
452471.Aasi_0519(PF13857) PF12796 PF00023ER
452471.Aasi_0996PF13637 PF00023 PF12796ER
452471.Aasi_0224(PF13857) PF13606 PF12796ER; (ER)
452471.Aasi_1435PF04564 PF00023 PF12796ER
452471.Aasi_1610(PF13857) PF13637 (PF07517) PF12796 PF00023
452471.Aasi_1290PF12796 PF08238 PF00023ER
452471.Aasi_0871PF13637 PF13606 PF12796ER
452471.Aasi_0636PF13637 PF00023 PF12796ER; (ER)
452471.Aasi_0849PF04564 PF08238 PF12796ER
452471.Aasi_1784PF13637 PF12796 PF00023ER
452471.Aasi_0738PF00023 PF13606 PF12796ER
452471.Aasi_1229(PF13857) PF08238 PF12796ER
452471.Aasi_0927(PF00474) PF13328ER
452471.Aasi_1451PF13613 PF13359(mitochondrial)
452471.Aasi_0355(PF00474) PF13328ER
452471.Aasi_0851PF08238 PF04564ER
452471.Aasi_0586PF13613 PF13359(mitochondrial)
452471.Aasi_1490PF13613 PF13359(mitochondrial)
452471.Aasi_1253PF13637 PF12796ER
452471.Aasi_1316PF13613 PF13359(mitochondrial)
452471.Aasi_1383PF13516 PF00646ER
452471.Aasi_0318PF13516 PF08238ER
452471.Aasi_0553PF13613 PF13359(mitochondrial)
452471.Aasi_1120PF13516 PF00646(ER)
452471.Aasi_0911PF00023 PF12796ER
452471.Aasi_1443PF13637 PF04564ER
452471.Aasi_1217PF08238 PF12796ER
452471.Aasi_0939(PF00474) PF13328ER
452471.Aasi_1144(PF07517) PF12796ER
452471.Aasi_1436PF13516 (PF12937)ER
452471.Aasi_1055PF13613 PF13359(mitochondrial)
452471.Aasi_1056PF13613 PF13359(mitochondrial)
452471.Aasi_1117PF13613 PF13359(mitochondrial)
452471.Aasi_0909PF13637 PF12796ER
452471.Aasi_1477PF13516 PF00646ER
452471.Aasi_0040(PF00474) PF13328ER
452471.Aasi_0703PF13637 PF12796ER
452471.Aasi_0228PF13637 PF12796ER
452471.Aasi_1153PF12796 PF00023ER
452471.Aasi_0839(PF00474) PF13328ER
452471.Aasi_0112PF13516 PF00646ER
452471.Aasi_1288PF08238 PF12796ER
452471.Aasi_0393PF13637 PF04564 PF12796(ER)
452471.Aasi_0563(PF00474) PF13328ER
452471.Aasi_1221PF13637 PF12796ER
452471.Aasi_0025PF13516 (PF12937)ER
452471.Aasi_1388PF13613 PF13359(mitochondrial)
452471.Aasi_1009(PF00474) PF13328ER
452471.Aasi_0694(PF00474)ER
452471.Aasi_0697(PF00474)ER
452471.Aasi_0992PF13613 PF13359(mitochondrial)
452471.Aasi_1918PF13518(mitochondrial)
452471.Aasi_0455PF08238(ER)
452471.Aasi_0451PF04564ER
452471.Aasi_0923PF00646ER; (ER)
452471.Aasi_0770PF00443ER
452471.Aasi_1071PF12796ER
452471.Aasi_1251PF08238ER
452471.Aasi_1315PF13613(mitochondrial)
452471.Aasi_0319PF13516ER
452471.Aasi_1814PF08238ER
452471.Aasi_0954PF08238mitochondrial
452471.Aasi_0955PF08238(ER); ER
452471.Aasi_0950PF08238mitochondrial
452471.Aasi_0951PF08238ER
452471.Aasi_0131PF12796(mitochondrial)
452471.Aasi_0225PF13637 PF13606 PF12796
452471.Aasi_0729PF13516(ER)
452471.Aasi_0043PF04548ER
452471.Aasi_0725PF13516ER; (ER)
452471.Aasi_0727PF08238ER
452471.Aasi_0854PF08238ER
452471.Aasi_1038(PF00474)ER
452471.Aasi_1627PF08238ER
452471.Aasi_1744PF13328(mitochondrial)
452471.Aasi_1743(PF00474)ER
452471.Aasi_0501PF12796ER
452471.Aasi_0461PF08238(ER)
452471.Aasi_0717PF08238ER
452471.Aasi_0945(PF12937)ER
452471.Aasi_0944PF12796ER
452471.Aasi_0544PF08238(ER)
452471.Aasi_1484PF12796(mitochondrial)
452471.Aasi_0432PF08238ER
452471.Aasi_1058PF13516ER
452471.Aasi_1753PF13516mitochondrial
452471.Aasi_0377PF04564ER; (ER)
452471.Aasi_0110PF13516(mitochondrial); mitochondrial
452471.Aasi_0574PF13637 PF12796 PF00023
452471.Aasi_1471PF13613mitochondrial; (mitochondrial)
452471.Aasi_1474PF13613mitochondrial; (mitochondrial)
452471.Aasi_1479PF12796ER
452471.Aasi_0472PF08238ER
452471.Aasi_1107PF08238mitochondrial
452471.Aasi_1828PF13613mitochondrial; (mitochondrial)
452471.Aasi_0575PF13613 PF13359(mitochondrial)
452471.Aasi_0446(PF00474)ER
452471.Aasi_1444(PF00474) PF13328(plastid)
452471.Aasi_0448PF13613 PF13359(mitochondrial)
452471.Aasi_1212PF08238ER
452471.Aasi_1569(PF00474)ER
452471.Aasi_1041(PF00474)ER
452471.Aasi_0921PF08238ER
452471.Aasi_0363PF12796ER; (ER)
452471.Aasi_1789PF13613(mitochondrial)
452471.Aasi_0806(PF07517)(mitochondrial)
452471.Aasi_0802(PF12937)ER
452471.Aasi_0895PF08238ER
452471.Aasi_0892PF08238ER
452471.Aasi_1227PF13516ER
452471.Aasi_0327(PF00474)ER
452471.Aasi_1738PF13613 PF13359
452471.Aasi_1317PF13637 PF12796
452471.Aasi_1811PF08238(mitochondrial)
452471.Aasi_1953PF13613 PF13359
452471.Aasi_1032PF12796(plastid)
452471.Aasi_1628PF13516(plastid)
452471.Aasi_1845PF13613 PF13359
452471.Aasi_1848PF13613 PF13359
452471.Aasi_1503(PF00474) PF13328
452471.Aasi_1501(PF00474) PF13328
452471.Aasi_1581PF00023 PF12796
452471.Aasi_1758PF13613(mitochondrial)
452471.Aasi_1878PF13637 PF12796
452471.Aasi_1478PF13613 PF13359
452471.Aasi_1152PF00023 PF12796
452471.Aasi_1652PF13613 PF13359
452471.Aasi_0852PF08238 PF04564
452471.Aasi_0526PF13516(ER)
452471.Aasi_1904PF13613 PF13359
452471.Aasi_0449(PF00474) PF13328
452471.Aasi_1218PF08238 PF04564
452471.Aasi_1566PF13613 PF13359
452471.Aasi_1780PF13613 PF13359
452471.Aasi_1868PF13516 (PF12937)
452471.Aasi_1865PF13637 PF12796
452471.Aasi_1182PF13328(plastid)
452471.Aasi_1636PF13613(mitochondrial)
452471.Aasi_1527PF13613(mitochondrial)
452471.Aasi_1521PF13613(mitochondrial)
452471.Aasi_1040PF13328
452471.Aasi_1821PF13359
452471.Aasi_1820PF13613
452471.Aasi_1823PF13518
452471.Aasi_0859(PF08459)
452471.Aasi_1911PF13613
452471.Aasi_1910PF13359
452471.Aasi_1914PF13518
452471.Aasi_1827PF13359
452471.Aasi_1459PF13613
452471.Aasi_0698PF13328
452471.Aasi_1571PF13518
452471.Aasi_1779PF13359
452471.Aasi_1774PF13518
452471.Aasi_1797PF13518
452471.Aasi_1955PF13518
452471.Aasi_1928PF12796not used
452471.Aasi_0034PF08238
452471.Aasi_1869PF12796
452471.Aasi_1586PF08238
452471.Aasi_1584PF08238
452471.Aasi_1585PF08238
452471.Aasi_1623PF13359
452471.Aasi_1626(PF12937)
452471.Aasi_1599PF13518
452471.Aasi_1539PF13518
452471.Aasi_1698PF13359
452471.Aasi_1699PF13613
452471.Aasi_1742PF13359
452471.Aasi_1846PF13518
452471.Aasi_0503(PF10685)
452471.Aasi_0764PF08238
452471.Aasi_1093(PF10685)
452471.Aasi_1805PF00443
452471.Aasi_1323PF08238
452471.Aasi_0236PF13328
452471.Aasi_1938PF13518
452471.Aasi_1022PF13359
452471.Aasi_1590PF13518
452471.Aasi_1612PF13518
452471.Aasi_1822PF13613
452471.Aasi_1118PF08238
452471.Aasi_1680PF08238
452471.Aasi_1272PF13359
452471.Aasi_1754PF13516
452471.Aasi_1751PF13518
452471.Aasi_1877PF13518
452471.Aasi_0973(PF14328)
452471.Aasi_0409PF13637
452471.Aasi_1473PF13359
452471.Aasi_1555PF13518
452471.Aasi_1831PF13613
452471.Aasi_1830PF13359
452471.Aasi_1741PF13613
452471.Aasi_1568PF13518
452471.Aasi_1701PF13518
452471.Aasi_1562PF13518
452471.Aasi_1302PF13359
452471.Aasi_1603PF13613
452471.Aasi_1602PF13359
452471.Aasi_1767PF08238
452471.Aasi_1942PF13613
452471.Aasi_1941PF13359
452471.Aasi_1414(PF12255)
452471.Aasi_1417(PF03538)
452471.Aasi_1465PF13518
452471.Aasi_1460PF13359
452471.Aasi_0024(PF08459)
452471.Aasi_1819PF13359
452471.Aasi_1799PF13613
452471.Aasi_1639PF13518
452471.Aasi_1137(PF10685)
452471.Aasi_1529PF13518
452471.Aasi_1643PF13613
452471.Aasi_1642PF13518

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================