Metamenu

Effective results for Coprobacillus sp. 29_1 (eggnog40)

Summary

Number of putative secreted proteins: 348
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 43 eukaryotic-like domains, contained in 348 proteins (125 high, 223 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
469596.HMPREF9488_00489(PF05738)ER
469596.HMPREF9488_00244(PF07555)ER
469596.HMPREF9488_03176PF16403(ER)
469596.HMPREF9488_00906(PF05738)ER
469596.HMPREF9488_01542(PF01381)(mitochondrial); mitochondrial
469596.HMPREF9488_02164PF16403ER
469596.HMPREF9488_00281(PF01992)(mitochondrial)
469596.HMPREF9488_00139(PF01554)(mitochondrial)
469596.HMPREF9488_01719(PF12681)(mitochondrial)
469596.HMPREF9488_02171(PF01554)ER
469596.HMPREF9488_00454(PF13529)ER
469596.HMPREF9488_00927(PF06541)ER
469596.HMPREF9488_00709(PF01554)(ER)
469596.HMPREF9488_00638(PF05738)ER
469596.HMPREF9488_00148(PF13529)ER
469596.HMPREF9488_02142(PF01554)(ER)
469596.HMPREF9488_00931PF16403ER
469596.HMPREF9488_01608(PF13529)ER
469596.HMPREF9488_03025(PF01381)(mitochondrial)
469596.HMPREF9488_00767(PF02690)ER
469596.HMPREF9488_00366(PF01381)(mitochondrial)
469596.HMPREF9488_00361(PF00359)ER
469596.HMPREF9488_01169PF01418ER
469596.HMPREF9488_01617(PF01554)ER; (ER)
469596.HMPREF9488_01769(PF05738)ER
469596.HMPREF9488_00955(PF00367)mitochondrial; (mitochondrial)
469596.HMPREF9488_00370(PF00367)(mitochondrial); mitochondrial
469596.HMPREF9488_00086(PF01381)(mitochondrial)
469596.HMPREF9488_02138PF16403ER
469596.HMPREF9488_02040(PF00359)(mitochondrial)
469596.HMPREF9488_03663(PF14526)mitochondrial
469596.HMPREF9488_00564(PF01554)(ER); (mitochondrial)
469596.HMPREF9488_00189(PF11070)ER
469596.HMPREF9488_03673(PF01554)(ER)
469596.HMPREF9488_02237(PF01381)(mitochondrial)
469596.HMPREF9488_00979(PF00367)ER
469596.HMPREF9488_00974(PF02690)ER
469596.HMPREF9488_00975(PF02690)ER
469596.HMPREF9488_01488(PF01554)ER
469596.HMPREF9488_02842(PF02275)ER
469596.HMPREF9488_01492(PF13529)ER
469596.HMPREF9488_01878PF16403ER
469596.HMPREF9488_02274(PF05738)ER
469596.HMPREF9488_01514(PF00359)(mitochondrial)
469596.HMPREF9488_00239(PF07555)ER
469596.HMPREF9488_02416(PF06541)ER
469596.HMPREF9488_00533(PF01554)(ER)
469596.HMPREF9488_00006(PF13529)ER
469596.HMPREF9488_01047(PF01554)(ER)
469596.HMPREF9488_02755(PF02690)ER
469596.HMPREF9488_02331(PF05738)ER
469596.HMPREF9488_03546(PF05738)ER
469596.HMPREF9488_00817(PF05738)ER
469596.HMPREF9488_00256(PF02811)mitochondrial
469596.HMPREF9488_02989PF01418(plastid)
469596.HMPREF9488_03743(PF01380) PF01418
469596.HMPREF9488_02777(PF01380) PF01418
469596.HMPREF9488_02774(PF01554)(ER)
469596.HMPREF9488_03776(PF01380) PF01418
469596.HMPREF9488_03489(PF01554)(ER)
469596.HMPREF9488_02972(PF01380) PF01418
469596.HMPREF9488_00299(PF01380) PF01418
469596.HMPREF9488_02038(PF01380) PF01418
469596.HMPREF9488_02366(PF01380) PF01418
469596.HMPREF9488_02953(PF00367)(mitochondrial)
469596.HMPREF9488_00928(PF01554)(ER)
469596.HMPREF9488_03708(PF01380) PF01418
469596.HMPREF9488_03455(PF01380) PF01418
469596.HMPREF9488_02482(PF01554)(ER)
469596.HMPREF9488_01280(PF01380) PF01418
469596.HMPREF9488_01916(PF01380) PF01418
469596.HMPREF9488_02153(PF01380) PF01418
469596.HMPREF9488_02023(PF01380) PF01418
469596.HMPREF9488_03600(PF01554)(ER)
469596.HMPREF9488_00437(PF01380) PF01418
469596.HMPREF9488_00385(PF01381)(mitochondrial); not used
469596.HMPREF9488_01901PF00232(ER)
469596.HMPREF9488_02124(PF01380) PF01418
469596.HMPREF9488_02059(PF01380) PF01418
469596.HMPREF9488_03610(PF01380) PF01418
469596.HMPREF9488_01809PF00232(mitochondrial)
469596.HMPREF9488_01253(PF01380) PF01418
469596.HMPREF9488_02217(PF05738)(plastid)
469596.HMPREF9488_00994(PF01380) PF01418
469596.HMPREF9488_00995(PF01380) PF01418
469596.HMPREF9488_02205(PF01380) PF01418
469596.HMPREF9488_01121(PF02811)(mitochondrial)
469596.HMPREF9488_02315(PF01554)(ER)
469596.HMPREF9488_02885(PF01380) PF01418
469596.HMPREF9488_00306(PF01380) PF01418
469596.HMPREF9488_00861(PF05738)(ER)
469596.HMPREF9488_00530(PF01380) PF01418
469596.HMPREF9488_00531(PF01380) PF01418
469596.HMPREF9488_00812(PF01380)(ER)
469596.HMPREF9488_02181PF00232
469596.HMPREF9488_02504(PF01554)
469596.HMPREF9488_02769PF00232
469596.HMPREF9488_02768(PF01381)
469596.HMPREF9488_03568(PF01381)
469596.HMPREF9488_03104(PF02811)
469596.HMPREF9488_02942PF00232
469596.HMPREF9488_00488PF00232
469596.HMPREF9488_03364(PF13240)
469596.HMPREF9488_00807PF00232
469596.HMPREF9488_00803PF00232
469596.HMPREF9488_00669PF00232
469596.HMPREF9488_00666PF00232
469596.HMPREF9488_00667(PF00834)
469596.HMPREF9488_00663PF00232
469596.HMPREF9488_00660(PF13240)
469596.HMPREF9488_00661(PF13240)
469596.HMPREF9488_00064PF00232
469596.HMPREF9488_03814(PF01381)
469596.HMPREF9488_03816(PF01381)
469596.HMPREF9488_00118(PF00367)
469596.HMPREF9488_00119PF04794
469596.HMPREF9488_02516PF08282
469596.HMPREF9488_02512(PF06445)
469596.HMPREF9488_01956(PF00359)
469596.HMPREF9488_02776PF00232
469596.HMPREF9488_02770(PF06445)
469596.HMPREF9488_03771PF08282
469596.HMPREF9488_03772PF08282
469596.HMPREF9488_00734PF08282
469596.HMPREF9488_03399(PF02873)
469596.HMPREF9488_02971PF00232
469596.HMPREF9488_00584(PF01610)
469596.HMPREF9488_00902(PF06541)
469596.HMPREF9488_00900(PF13597)
469596.HMPREF9488_00295PF08282
469596.HMPREF9488_00055(PF00359)
469596.HMPREF9488_00053(PF00359)
469596.HMPREF9488_00059(PF02811)
469596.HMPREF9488_00123PF00232
469596.HMPREF9488_00128PF00232
469596.HMPREF9488_01604(PF01381)
469596.HMPREF9488_01509(PF01381)
469596.HMPREF9488_03780(PF02275)
469596.HMPREF9488_01541(PF00958)
469596.HMPREF9488_02559(PF02811)
469596.HMPREF9488_03768(PF06445)
469596.HMPREF9488_03018PF08282
469596.HMPREF9488_03161(PF13597)
469596.HMPREF9488_03162(PF13597)
469596.HMPREF9488_02949PF00232
469596.HMPREF9488_00806(PF00367)
469596.HMPREF9488_00282(PF01992)
469596.HMPREF9488_00288(PF01991)
469596.HMPREF9488_03832(PF01610)
469596.HMPREF9488_03831(PF01610)
469596.HMPREF9488_00131PF04794
469596.HMPREF9488_01151(PF01554)
469596.HMPREF9488_02578(PF01381)
469596.HMPREF9488_01970PF08282
469596.HMPREF9488_01972PF01418
469596.HMPREF9488_01975PF04794
469596.HMPREF9488_03022(PF13240)
469596.HMPREF9488_02954PF00232
469596.HMPREF9488_02952PF08282
469596.HMPREF9488_00701(PF13155)
469596.HMPREF9488_00704(PF01784)
469596.HMPREF9488_00708PF08282
469596.HMPREF9488_00630(PF13155)
469596.HMPREF9488_00145(PF01380)
469596.HMPREF9488_03041PF08282
469596.HMPREF9488_03047(PF01381)
469596.HMPREF9488_01140(PF00367)
469596.HMPREF9488_02144PF08282
469596.HMPREF9488_01969PF08282
469596.HMPREF9488_03703(PF02811)
469596.HMPREF9488_02810PF08282
469596.HMPREF9488_02035(PF01381)
469596.HMPREF9488_03458PF01418
469596.HMPREF9488_02926PF08282
469596.HMPREF9488_00442(PF01380)
469596.HMPREF9488_01171PF00165
469596.HMPREF9488_01170PF00165not used
469596.HMPREF9488_01607PF08282
469596.HMPREF9488_01606(PF02811)
469596.HMPREF9488_01600(PF14526)
469596.HMPREF9488_01774(PF01381)
469596.HMPREF9488_01779(PF13350)
469596.HMPREF9488_01778(PF13350)
469596.HMPREF9488_01285PF08282
469596.HMPREF9488_02156PF01418
469596.HMPREF9488_02157(PF01381)
469596.HMPREF9488_02155PF00232
469596.HMPREF9488_01596PF00232
469596.HMPREF9488_01594(PF14526)
469596.HMPREF9488_02807PF08282
469596.HMPREF9488_03283(PF01381)
469596.HMPREF9488_02026(PF01381)
469596.HMPREF9488_02024PF08282
469596.HMPREF9488_03609(PF12002)
469596.HMPREF9488_02733(PF00834)
469596.HMPREF9488_03199(PF13155)
469596.HMPREF9488_03464PF08282
469596.HMPREF9488_03517(PF00359)
469596.HMPREF9488_03519PF00232
469596.HMPREF9488_02937(PF13240)
469596.HMPREF9488_00091(PF00359)
469596.HMPREF9488_00380(PF01554)
469596.HMPREF9488_00360(PF01380)
469596.HMPREF9488_00169PF01418
469596.HMPREF9488_01166PF00232
469596.HMPREF9488_01165(PF00367)
469596.HMPREF9488_01341(PF06445)
469596.HMPREF9488_01903PF01418
469596.HMPREF9488_02123PF08282
469596.HMPREF9488_01588(PF01784)
469596.HMPREF9488_01581(PF00367)
469596.HMPREF9488_01582PF00232
469596.HMPREF9488_01583PF04794
469596.HMPREF9488_02839PF00232
469596.HMPREF9488_02831PF08282
469596.HMPREF9488_03619(PF01381)
469596.HMPREF9488_03181(PF01381)
469596.HMPREF9488_00856(PF01381)
469596.HMPREF9488_00886(PF12646)
469596.HMPREF9488_00420PF00232
469596.HMPREF9488_00954PF04794
469596.HMPREF9488_00390(PF01381)
469596.HMPREF9488_00088(PF01381)
469596.HMPREF9488_01621(PF03266)
469596.HMPREF9488_02221(PF13155)
469596.HMPREF9488_02137(PF01381)
469596.HMPREF9488_01807(PF01381)
469596.HMPREF9488_02821(PF01381)
469596.HMPREF9488_02042PF00232
469596.HMPREF9488_03668(PF14249)
469596.HMPREF9488_02917PF08282
469596.HMPREF9488_02918PF08282
469596.HMPREF9488_03060PF00232
469596.HMPREF9488_03063PF00232not used
469596.HMPREF9488_03084(PF01610)
469596.HMPREF9488_03081(PF01381)
469596.HMPREF9488_00563PF04794
469596.HMPREF9488_00567PF00232
469596.HMPREF9488_00566PF00232
469596.HMPREF9488_00964(PF00359)
469596.HMPREF9488_00967(PF00359)
469596.HMPREF9488_00966(PF00834)
469596.HMPREF9488_00961PF04794
469596.HMPREF9488_00963PF08282
469596.HMPREF9488_00348(PF01610)
469596.HMPREF9488_01740(PF06445)
469596.HMPREF9488_01746(PF01381)
469596.HMPREF9488_01747(PF12002)
469596.HMPREF9488_01033(PF01381)
469596.HMPREF9488_02210(PF13350)
469596.HMPREF9488_02213(PF14311)
469596.HMPREF9488_01632(PF06445)
469596.HMPREF9488_02459(PF12002)
469596.HMPREF9488_01810(PF00367)
469596.HMPREF9488_02677(PF14526)
469596.HMPREF9488_02078PF00232
469596.HMPREF9488_00407(PF06445)
469596.HMPREF9488_00405(PF13597)
469596.HMPREF9488_00992PF00232
469596.HMPREF9488_00354PF00232
469596.HMPREF9488_00191(PF01554)
469596.HMPREF9488_00754(PF01610)
469596.HMPREF9488_01485PF08282
469596.HMPREF9488_01486PF08282
469596.HMPREF9488_01480(PF01381)
469596.HMPREF9488_01000(PF01381)
469596.HMPREF9488_01006(PF00359)
469596.HMPREF9488_01797(PF02811)
469596.HMPREF9488_01796(PF05225)
469596.HMPREF9488_01263(PF01380)
469596.HMPREF9488_01262(PF00359)
469596.HMPREF9488_03242(PF13151)
469596.HMPREF9488_02204(PF01784)
469596.HMPREF9488_02208(PF00367)
469596.HMPREF9488_02209(PF02811)
469596.HMPREF9488_03644(PF01381)
469596.HMPREF9488_03640(PF02811)
469596.HMPREF9488_02066(PF01381)
469596.HMPREF9488_00210PF08282
469596.HMPREF9488_00506(PF01381)
469596.HMPREF9488_01490(PF01554)
469596.HMPREF9488_01307(PF01381)
469596.HMPREF9488_02472(PF01381)
469596.HMPREF9488_01871(PF01381)
469596.HMPREF9488_02307(PF01554)
469596.HMPREF9488_03781(PF02275)
469596.HMPREF9488_02304(PF13155)
469596.HMPREF9488_03784PF00232
469596.HMPREF9488_03658(PF06445)
469596.HMPREF9488_02894(PF00359)
469596.HMPREF9488_02890(PF13350)
469596.HMPREF9488_00206PF01418
469596.HMPREF9488_00517(PF00359)
469596.HMPREF9488_00518(PF00359)
469596.HMPREF9488_00680(PF00367)
469596.HMPREF9488_00687(PF13597)
469596.HMPREF9488_01510(PF01381)
469596.HMPREF9488_00335(PF01610)
469596.HMPREF9488_00337PF16403
469596.HMPREF9488_02313PF00232
469596.HMPREF9488_01469(PF00958)
469596.HMPREF9488_01063(PF01381)
469596.HMPREF9488_01067(PF14526)
469596.HMPREF9488_01204(PF06445)
469596.HMPREF9488_01668(PF01880)
469596.HMPREF9488_02467(PF14526)
469596.HMPREF9488_02314PF08282
469596.HMPREF9488_01518(PF01381)
469596.HMPREF9488_02265(PF14526)
469596.HMPREF9488_03686(PF01381)
469596.HMPREF9488_03136(PF13910)
469596.HMPREF9488_02081(PF01381)
469596.HMPREF9488_03359PF08282
469596.HMPREF9488_03353(PF01795)
469596.HMPREF9488_02883PF08282
469596.HMPREF9488_00233PF00232
469596.HMPREF9488_00232PF00232
469596.HMPREF9488_00655(PF13240)
469596.HMPREF9488_00658(PF00359)
469596.HMPREF9488_01075(PF12681)
469596.HMPREF9488_01672(PF01880)
469596.HMPREF9488_02417PF16403
469596.HMPREF9488_02639(PF02811)
469596.HMPREF9488_01501(PF01795)
469596.HMPREF9488_03129(PF01381)
469596.HMPREF9488_03341(PF02873)
469596.HMPREF9488_00539PF01418
469596.HMPREF9488_00648PF08282
469596.HMPREF9488_00223PF08282
469596.HMPREF9488_00004PF04794
469596.HMPREF9488_01191PF08282
469596.HMPREF9488_01442(PF01381)
469596.HMPREF9488_01194PF08282
469596.HMPREF9488_01532(PF00359)
469596.HMPREF9488_01227(PF02811)
469596.HMPREF9488_01997(PF00367)
469596.HMPREF9488_02478(PF02811)
469596.HMPREF9488_03759(PF00367)
469596.HMPREF9488_03577(PF01610)
469596.HMPREF9488_00495(PF01381)
469596.HMPREF9488_00493(PF01381)
469596.HMPREF9488_03010(PF01381)
469596.HMPREF9488_00675PF00232
469596.HMPREF9488_00677PF01418
469596.HMPREF9488_00250PF08282
469596.HMPREF9488_00255(PF00359)
469596.HMPREF9488_00259(PF00359)
469596.HMPREF9488_01459(PF13350)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================