Metamenu

Effective results for Lactobacillus buchneri NRRL B-30929 (eggnog40)

Summary

Number of putative secreted proteins: 104
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 20 eukaryotic-like domains, contained in 104 proteins (31 high, 73 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
511437.Lbuc_0419(PF03099) (PF10437)(ER)
511437.Lbuc_0071(PF03306)ER
511437.Lbuc_0531(PF00413)ER
511437.Lbuc_0836(PF09286)ER
511437.Lbuc_2069(PF01597)mitochondrial
511437.Lbuc_0286(PF06736)(ER)
511437.Lbuc_2115(PF13347)(mitochondrial)
511437.Lbuc_2119(PF01183)ER
511437.Lbuc_1254(PF09286)ER
511437.Lbuc_1749(PF12821)ER
511437.Lbuc_1928(PF03382)ER
511437.Lbuc_1800(PF01183)ER
511437.Lbuc_1244(PF09286)ER
511437.Lbuc_0408(PF06736)(ER)
511437.Lbuc_0412(PF06736)ER
511437.Lbuc_2124(PF06736)(ER)
511437.Lbuc_0083(PF09286)ER
511437.Lbuc_1776(PF12821)ER
511437.Lbuc_0551(PF09286)(mitochondrial)
511437.Lbuc_0628(PF00413)ER
511437.Lbuc_0784(PF00413)ER
511437.Lbuc_0544(PF03382)ER; (ER)
511437.Lbuc_0154(PF03306)(ER)
511437.Lbuc_0200(PF01183)ER
511437.Lbuc_0846(PF03382)ER
511437.Lbuc_2221(PF09286)ER
511437.Lbuc_1948(PF03382)ER
511437.Lbuc_0123(PF09286)ER
511437.Lbuc_0248(PF13347)(mitochondrial)
511437.Lbuc_2247(PF13653)(ER)
511437.Lbuc_1060(PF03577)(mitochondrial)
511437.Lbuc_2068(PF03099) (PF10437)
511437.Lbuc_1860(PF03099) (PF10437)
511437.Lbuc_2129(PF03099) (PF10437)
511437.Lbuc_1636(PF03577)(mitochondrial)
511437.Lbuc_1655(PF01183)(mitochondrial)
511437.Lbuc_0250(PF12464)
511437.Lbuc_0497PF01610
511437.Lbuc_1856(PF13347)
511437.Lbuc_2241(PF13518)
511437.Lbuc_2360(PF13518)
511437.Lbuc_1660(PF03099)
511437.Lbuc_1848(PF13347)
511437.Lbuc_2098(PF12464)
511437.Lbuc_1387PF01610
511437.Lbuc_1473PF13936
511437.Lbuc_1651(PF13347)
511437.Lbuc_1390(PF01183)
511437.Lbuc_0037PF13936
511437.Lbuc_0293PF13936
511437.Lbuc_0296PF01610
511437.Lbuc_0500(PF02275)
511437.Lbuc_0610(PF12464)
511437.Lbuc_1818(PF12464)
511437.Lbuc_1927(PF03382)
511437.Lbuc_2283PF13936
511437.Lbuc_0404(PF13347)
511437.Lbuc_0194PF13936
511437.Lbuc_2052(PF13347)
511437.Lbuc_0970PF01610
511437.Lbuc_1230PF01610
511437.Lbuc_0417(PF01597)
511437.Lbuc_0965PF01610
511437.Lbuc_1353PF01610
511437.Lbuc_1590(PF03099)
511437.Lbuc_0082PF01610
511437.Lbuc_1173PF01610
511437.Lbuc_0790(PF12464)
511437.Lbuc_0420(PF01597)
511437.Lbuc_0220(PF02275)
511437.Lbuc_0556(PF13518)
511437.Lbuc_2154(PF12464)
511437.Lbuc_2326PF13936
511437.Lbuc_2227PF13936
511437.Lbuc_1362(PF13518)
511437.Lbuc_1363PF01610
511437.Lbuc_0169(PF06100)
511437.Lbuc_0165PF13936
511437.Lbuc_0780PF01610
511437.Lbuc_1960(PF02275)
511437.Lbuc_2147(PF12464)
511437.Lbuc_0203(PF13347)
511437.Lbuc_0208(PF02057)
511437.Lbuc_2175PF01610
511437.Lbuc_2309(PF12821)
511437.Lbuc_0933PF01610
511437.Lbuc_1263PF01610
511437.Lbuc_0456PF01610
511437.Lbuc_0451(PF13518)
511437.Lbuc_2165PF01610
511437.Lbuc_0822(PF03577)
511437.Lbuc_1629PF01610
511437.Lbuc_0041PF13936
511437.Lbuc_0598(PF06100)
511437.Lbuc_1956(PF13347)
511437.Lbuc_1188PF13936
511437.Lbuc_1506(PF01183)
511437.Lbuc_1504PF01610
511437.Lbuc_1059(PF03577)
511437.Lbuc_0273PF01610
511437.Lbuc_0874(PF01597)
511437.Lbuc_1197PF13936
511437.Lbuc_0484PF13936
511437.Lbuc_0485(PF00413)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================