Metamenu

Effective results for Butyrivibrio crossotus DSM 2876 (eggnog40)

Summary

Number of putative secreted proteins: 21
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 10 eukaryotic-like domains, contained in 21 proteins (2 high, 19 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
511680.BUTYVIB_02113(PF00112)ER
511680.BUTYVIB_02556(PF00112)ER
511680.BUTYVIB_02084(PF05704)mitochondrial; (mitochondrial)
511680.BUTYVIB_02473PF07062mitochondrial
511680.BUTYVIB_01138(PF02938)
511680.BUTYVIB_02111(PF04383)
511680.BUTYVIB_01632(PF04326)not used
511680.BUTYVIB_01638(PF04326)
511680.BUTYVIB_02366(PF04326)
511680.BUTYVIB_02374(PF04326)
511680.BUTYVIB_00334(PF01795)
511680.BUTYVIB_01303(PF01171)
511680.BUTYVIB_01766(PF04383)
511680.BUTYVIB_00791(PF01171)
511680.BUTYVIB_00761(PF04326)
511680.BUTYVIB_01742(PF04253)
511680.BUTYVIB_00971(PF02938)
511680.BUTYVIB_02519(PF01171)
511680.BUTYVIB_00289PF15636
511680.BUTYVIB_00133(PF01171)
511680.BUTYVIB_01719(PF01795)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================