Metamenu

Effective results for Lactobacillus antri DSM 16041 (eggnog40)

Summary

Number of putative secreted proteins: 41
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 14 eukaryotic-like domains, contained in 41 proteins (1 high, 40 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525309.HMPREF0494_1621PF00609mitochondrial
525309.HMPREF0494_0574(PF03596)ER
525309.HMPREF0494_0037(PF03083)ER
525309.HMPREF0494_0746(PF02866) (PF00056)(ER)
525309.HMPREF0494_0810(PF00413)ER
525309.HMPREF0494_0495(PF00413)(mitochondrial)
525309.HMPREF0494_1050(PF00121)(mitochondrial)
525309.HMPREF0494_2006(PF00413)ER
525309.HMPREF0494_0385(PF02866) (PF00056)
525309.HMPREF0494_1951(PF16193) (PF12002)
525309.HMPREF0494_0765(PF16193) (PF12002)
525309.HMPREF0494_1650(PF00121)(mitochondrial)
525309.HMPREF0494_0123(PF02866) (PF00056)
525309.HMPREF0494_0309(PF02866) (PF00056)
525309.HMPREF0494_0504(PF02866) (PF00056)
525309.HMPREF0494_2119(PF02866) (PF00056)
525309.HMPREF0494_1267(PF16193) (PF12002)
525309.HMPREF0494_1040(PF00121)(mitochondrial)
525309.HMPREF0494_1455(PF02866) (PF00056)
525309.HMPREF0494_1777(PF12949)not used
525309.HMPREF0494_1084(PF03596)
525309.HMPREF0494_0778(PF03577)
525309.HMPREF0494_0768(PF02275)
525309.HMPREF0494_0586(PF03577)
525309.HMPREF0494_2057(PF06414)
525309.HMPREF0494_0621(PF03577)
525309.HMPREF0494_0805(PF13240)
525309.HMPREF0494_2091(PF02275)
525309.HMPREF0494_0004(PF06414)
525309.HMPREF0494_0688(PF00121)
525309.HMPREF0494_2132(PF13240)
525309.HMPREF0494_2131(PF13240)
525309.HMPREF0494_0211(PF02275)
525309.HMPREF0494_2129(PF13240)
525309.HMPREF0494_0536(PF03083)
525309.HMPREF0494_1471(PF02275)
525309.HMPREF0494_1610(PF13240)
525309.HMPREF0494_1046(PF13240)
525309.HMPREF0494_1453(PF03577)
525309.HMPREF0494_0620(PF03577)
525309.HMPREF0494_1449(PF03577)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================