Effective results for Butyrivibrio fibrisolvens 16/4 (eggnog40)

Summary

Number of putative secreted proteins: 40
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 20 eukaryotic-like domains, contained in 40 proteins (8 high, 32 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
657324.CIY_01840				PF01637	(mitochondrial)
657324.CIY_26590				PF03151	ER
657324.CIY_27230				(PF14022)	mitochondrial
657324.CIY_12070				(PF06165) (PF17167)
657324.CIY_26940				PF01637	(plastid)
657324.CIY_05430				(PF06165) (PF17167)
657324.CIY_16740				PF01637
657324.CIY_29830				PF00165
657324.CIY_22090				(PF04961)
657324.CIY_13150				PF01637
657324.CIY_07280				(PF17167)
657324.CIY_14910				(PF01795)
657324.CIY_12970				(PF07517)
657324.CIY_12960				(PF07517)
657324.CIY_22370				(PF01795)
657324.CIY_13560				(PF17032)
657324.CIY_07270				(PF06165)
657324.CIY_18480				(PF00625)
657324.CIY_29880				(PF01969)	not used
657324.CIY_15190				(PF12437)
657324.CIY_34520				PF00165
657324.CIY_18470				(PF00625)
657324.CIY_25780				(PF09359)
657324.CIY_30230				(PF00625)
657324.CIY_14490				(PF01487)
657324.CIY_08790				(PF13151)
657324.CIY_09680				(PF01937)
657324.CIY_02620				(PF12437)
657324.CIY_09690				(PF01937)
657324.CIY_29460				(PF14249)
657324.CIY_27180				(PF14022)
657324.CIY_13830				(PF17032)
657324.CIY_29870				(PF01969)
657324.CIY_21460				(PF09359)
657324.CIY_22100				(PF04961)	not used
657324.CIY_00570				PF01637
657324.CIY_01510				(PF12640)
657324.CIY_28510				(PF14938)
657324.CIY_29240				(PF07517)
657324.CIY_14470				(PF01487)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================