Effective results for Faecalibacterium prausnitzii L2-6 (eggnog40)

Summary

Number of putative secreted proteins: 61
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 61 proteins (1 high, 60 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
718252.FP2_09240				(PF03432)	(mitochondrial)
718252.FP2_01410				(PF12646)	(ER)
718252.FP2_19800				(PF05697) (PF05698)
718252.FP2_07400				(PF05697) (PF05698)
718252.FP2_24470				PF16994	(mitochondrial)
718252.FP2_18180				(PF00239)
718252.FP2_12700				(PF00239)
718252.FP2_20230				(PF02195)
718252.FP2_19140				(PF03432)
718252.FP2_16000				(PF03054)
718252.FP2_19560				(PF02195)
718252.FP2_03800				(PF01880)
718252.FP2_24430				(PF03054)
718252.FP2_27630				(PF00239)
718252.FP2_00200				(PF03432)
718252.FP2_15840				(PF01880)
718252.FP2_03650				(PF00239)
718252.FP2_03300				(PF02195)
718252.FP2_08910				(PF03432)
718252.FP2_09460				(PF02195)
718252.FP2_00920				(PF02195)
718252.FP2_17170				(PF00239)
718252.FP2_00770				(PF02195)
718252.FP2_04460				(PF03432)
718252.FP2_01160				(PF00239)
718252.FP2_28890				(PF00239)
718252.FP2_22030				(PF00239)
718252.FP2_22270				(PF00239)
718252.FP2_00800				(PF02195)
718252.FP2_19720				(PF01807)
718252.FP2_28260				(PF02195)
718252.FP2_26840				(PF05698)
718252.FP2_04800				(PF02195)
718252.FP2_13330				(PF00239)
718252.FP2_22290				(PF13151)
718252.FP2_22740				(PF03432)
718252.FP2_10870				(PF00239)
718252.FP2_26070				(PF05698)
718252.FP2_04030				(PF00239)	not used
718252.FP2_22510				(PF00239)
718252.FP2_18240				(PF01807)
718252.FP2_15760				(PF00239)
718252.FP2_29980				(PF00239)
718252.FP2_13350				(PF00239)
718252.FP2_21330				(PF00239)
718252.FP2_14170				(PF03432)
718252.FP2_21840				(PF02195)
718252.FP2_08990				(PF00239)
718252.FP2_30010				(PF00239)
718252.FP2_28480				(PF01807)
718252.FP2_08500				(PF00239)
718252.FP2_09050				(PF02195)
718252.FP2_29840				(PF03432)
718252.FP2_20200				(PF02195)
718252.FP2_04340				(PF00239)
718252.FP2_13360				(PF00239)
718252.FP2_03230				(PF00239)
718252.FP2_21030				(PF03054)
718252.FP2_17640				(PF01880)
718252.FP2_22120				(PF00239)
718252.FP2_18710				(PF01807)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================