Effective results for Veillonella sp. oral taxon 158 str. F0412 (eggnog40)

Summary

Number of putative secreted proteins: 21
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 8 eukaryotic-like domains, contained in 21 proteins (2 high, 19 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
879309.HMPREF9199_0318(PF00939)ER
879309.HMPREF9199_0712(PF00939)ER
879309.HMPREF9199_1508(PF00939)ER
879309.HMPREF9199_0759(PF09511)mitochondrial
879309.HMPREF9199_1476(PF00939)ER
879309.HMPREF9199_0621(PF01693)(mitochondrial)
879309.HMPREF9199_1281(PF03083)ER; (ER)
879309.HMPREF9199_0218(PF00939)ER
879309.HMPREF9199_1420PF10551(mitochondrial)
879309.HMPREF9199_1835(PF13936)
879309.HMPREF9199_1209(PF00939)
879309.HMPREF9199_1784(PF13936)
879309.HMPREF9199_1340(PF03083)
879309.HMPREF9199_0756PF11443
879309.HMPREF9199_0734(PF13936)
879309.HMPREF9199_0936(PF13936)
879309.HMPREF9199_1282(PF00939)
879309.HMPREF9199_0695(PF13936)
879309.HMPREF9199_2034(PF08123)
879309.HMPREF9199_0987(PF13936)
879309.HMPREF9199_0683(PF01693)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================