Effective results for Vibrio campbellii ATCC BAA-1116 (eggnog40)
Summary
Number of putative secreted proteins: 1188
- Predicted by EffectiveT3: 232 (high confidence), 338 (low confidence)
- Predicted by EffectiveCCBD: 33 within, 39 before, 53 behind expected region 25..70aa
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 29 eukaryotic-like domains, contained in 539 proteins (503 high, 36 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, Type VI
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
338187.VIBHAR_01880 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_02688 | PF13592 PF13358 PF13551 | mitochondrial | |||
338187.VIBHAR_05065 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_05300 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_06376 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_02134 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_05660 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_02701 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_01719 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_05606 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_07122 | PF13592 PF13358 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_01662 | (+) | PF13592 PF13358 | ER | ||
338187.VIBHAR_01645 | PF13592 PF13358 | (mitochondrial) | |||
338187.VIBHAR_05208 | PF13592 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_05849 | PF13592 PF13551 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_05656 | (PF02839) (PF16403) | (ER) | |||
338187.VIBHAR_00548 | (PF02839) (PF16403) | ER | |||
338187.VIBHAR_02194 | (PF02839) PF10462 | ER; (ER) | |||
338187.VIBHAR_05899 | (PF02839) (PF16403) | ER | |||
338187.VIBHAR_02148 | (<) | PF00665 | mitochondrial | ||
338187.VIBHAR_03378 | + | ER | |||
338187.VIBHAR_00491 | (<) | ER | |||
338187.VIBHAR_03353 | (>) | ER | |||
338187.VIBHAR_02983 | PF01609 | (mitochondrial) | |||
338187.VIBHAR_05997 | PF01609 | ER; (ER) | |||
338187.VIBHAR_03626 | (PF02839) | ER | |||
338187.VIBHAR_01081 | (PF02839) | ER | |||
338187.VIBHAR_01089 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_06058 | PF00665 | (mitochondrial) | |||
338187.VIBHAR_06464 | (<) | ER | |||
338187.VIBHAR_05083 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_05080 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_02022 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_06853 | (>) | ER | |||
338187.VIBHAR_00666 | + | (mitochondrial) | |||
338187.VIBHAR_02231 | + | ER | |||
338187.VIBHAR_02258 | + | mitochondrial; (mitochondrial) | |||
338187.VIBHAR_06524 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_01571 | (>) | ER | |||
338187.VIBHAR_06593 | (PF07971) | ER | |||
338187.VIBHAR_06597 | (PF07971) | mitochondrial | |||
338187.VIBHAR_06598 | (PF07971) | ER | |||
338187.VIBHAR_06599 | (PF07971) | mitochondrial | |||
338187.VIBHAR_05240 | + | ER | |||
338187.VIBHAR_02048 | + | ER; (ER) | |||
338187.VIBHAR_06601 | (PF07971) | ER | |||
338187.VIBHAR_06602 | (PF07971) | (ER) | |||
338187.VIBHAR_01557 | + | (mitochondrial) | |||
338187.VIBHAR_01552 | (>) | ER | |||
338187.VIBHAR_05655 | PF00031 | ER | |||
338187.VIBHAR_00292 | PF00031 | (mitochondrial) | |||
338187.VIBHAR_04840 | (<) | mitochondrial | |||
338187.VIBHAR_00030 | (<) | ER | |||
338187.VIBHAR_04868 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_06090 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_02346 | (PF08180) | ER | |||
338187.VIBHAR_02341 | PF00665 | (mitochondrial) | |||
338187.VIBHAR_00055 | (>) | (mitochondrial) | |||
338187.VIBHAR_05362 | (>) | (mitochondrial) | |||
338187.VIBHAR_05364 | (>) | ER | |||
338187.VIBHAR_01304 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_04770 | (PF17186) | ER | |||
338187.VIBHAR_05883 | PF01609 | mitochondrial | |||
338187.VIBHAR_05881 | (>) | ER | |||
338187.VIBHAR_02647 | (PF17186) | ER | |||
338187.VIBHAR_03483 | (>) | (mitochondrial); mitochondrial | |||
338187.VIBHAR_03269 | (<) | (mitochondrial); (plastid) | |||
338187.VIBHAR_05945 | (PF02839) | mitochondrial; (mitochondrial) | |||
338187.VIBHAR_06948 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_06494 | (<) | (mitochondrial) | |||
338187.VIBHAR_02808 | PF02371 | ER | |||
338187.VIBHAR_06313 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_05465 | (<) | ER | |||
338187.VIBHAR_01599 | + | (mitochondrial) | |||
338187.VIBHAR_05695 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_02472 | PF01117 | ER; (ER) | |||
338187.VIBHAR_02474 | (+) | PF01117 | (ER) | ||
338187.VIBHAR_02610 | (>) | (mitochondrial) | |||
338187.VIBHAR_01813 | (>) | ER | |||
338187.VIBHAR_04990 | (PF06468) | ER | |||
338187.VIBHAR_04991 | (PF06468) | ER | |||
338187.VIBHAR_00772 | + | mitochondrial | |||
338187.VIBHAR_06297 | (>) | ER | |||
338187.VIBHAR_06351 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_06439 | PF02371 | ER | |||
338187.VIBHAR_00546 | + | PF02371 | (plastid) | ||
338187.VIBHAR_01463 | PF02371 | ER | |||
338187.VIBHAR_02190 | (PF02839) | ER; (ER) | |||
338187.VIBHAR_02693 | (>) | ER | |||
338187.VIBHAR_02698 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_05985 | PF01609 | ER; (ER) | |||
338187.VIBHAR_02548 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_06041 | + | mitochondrial; (mitochondrial) | |||
338187.VIBHAR_06044 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_06964 | PF00665 | (mitochondrial) | |||
338187.VIBHAR_01932 | + | ER | |||
338187.VIBHAR_01935 | PF00665 | (mitochondrial) | |||
338187.VIBHAR_06451 | (>) | ER | |||
338187.VIBHAR_06000 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_02249 | PF00078 | (mitochondrial) | |||
338187.VIBHAR_06580 | + | ER | |||
338187.VIBHAR_05058 | PF02371 | ER | |||
338187.VIBHAR_05645 | PF13592 PF13358 | (ER) | |||
338187.VIBHAR_00429 | (>) | mitochondrial; (mitochondrial) | |||
338187.VIBHAR_03557 | (>) | ER | |||
338187.VIBHAR_05079 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_05628 | PF01609 | (ER) | |||
338187.VIBHAR_01715 | PF13384 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_00007 | + | (ER) | |||
338187.VIBHAR_06388 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_07062 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_05604 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_03651 | (>) | ER | |||
338187.VIBHAR_06677 | PF13592 PF13384 PF13358 | ||||
338187.VIBHAR_02749 | (<) | ER | |||
338187.VIBHAR_07105 | PF02371 | (ER) | |||
338187.VIBHAR_00654 | + | (mitochondrial) | |||
338187.VIBHAR_00909 | (<) | mitochondrial; (mitochondrial) | |||
338187.VIBHAR_02973 | PF01609 | (ER) | |||
338187.VIBHAR_06505 | (<) | ER | |||
338187.VIBHAR_03258 | (PF02839) | ER | |||
338187.VIBHAR_01072 | + | (mitochondrial); mitochondrial | |||
338187.VIBHAR_05172 | + | ER | |||
338187.VIBHAR_05953 | + | (ER) | |||
338187.VIBHAR_02783 | (>) | ER | |||
338187.VIBHAR_05893 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_06783 | + | PF02371 | (plastid) | ||
338187.VIBHAR_00888 | + | ER | |||
338187.VIBHAR_06363 | (<) | ER | |||
338187.VIBHAR_01377 | + | ER | |||
338187.VIBHAR_06970 | PF13384 | (mitochondrial); mitochondrial | |||
338187.VIBHAR_00182 | PF00665 | (mitochondrial) | |||
338187.VIBHAR_00764 | (>) | ER | |||
338187.VIBHAR_02463 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_02605 | PF13592 PF13358 PF13551 | ||||
338187.VIBHAR_06119 | (>) | ER | |||
338187.VIBHAR_03024 | + | (ER) | |||
338187.VIBHAR_06286 | + | ER | |||
338187.VIBHAR_01845 | PF01609 | (ER) | |||
338187.VIBHAR_02168 | PF01609 | (ER) | |||
338187.VIBHAR_00495 | + | plastid | |||
338187.VIBHAR_00320 | PF13592 PF13551 | ||||
338187.VIBHAR_01452 | (<) | (plastid) | |||
338187.VIBHAR_05510 | PF03050 | (mitochondrial) | |||
338187.VIBHAR_00550 | PF01609 | (mitochondrial) | |||
338187.VIBHAR_00551 | PF01609 | (ER) | |||
338187.VIBHAR_00803 | + | (ER) | |||
338187.VIBHAR_01864 | PF13276 PF00665 | ||||
338187.VIBHAR_02987 | + | PF00078 | |||
338187.VIBHAR_02984 | PF01609 | (ER) | |||
338187.VIBHAR_06075 | PF01609 | (ER) | |||
338187.VIBHAR_02183 | PF01609 | (ER) | |||
338187.VIBHAR_06246 | PF01527 | (plastid) | |||
338187.VIBHAR_06247 | PF13276 PF00665 | ||||
338187.VIBHAR_02408 | PF01609 | (ER) | |||
338187.VIBHAR_03038 | PF01609 | (ER) | |||
338187.VIBHAR_01668 | PF13276 PF00665 | ||||
338187.VIBHAR_01086 | + | (ER) | |||
338187.VIBHAR_05742 | PF13276 PF00665 | ||||
338187.VIBHAR_06053 | PF01609 | (ER) | |||
338187.VIBHAR_03107 | PF01609 | (ER) | |||
338187.VIBHAR_05081 | PF01609 | (ER) | |||
338187.VIBHAR_02684 | PF01609 | (ER) | |||
338187.VIBHAR_05229 | + | plastid | |||
338187.VIBHAR_02020 | PF01609 | (ER) | |||
338187.VIBHAR_02026 | PF13592 PF13358 | ||||
338187.VIBHAR_01644 | PF01609 | (ER) | |||
338187.VIBHAR_04961 | + | plastid | |||
338187.VIBHAR_00476 | PF13592 PF13551 | ||||
338187.VIBHAR_00788 | (+) | (ER) | |||
338187.VIBHAR_06205 | PF01609 | (ER) | |||
338187.VIBHAR_06201 | PF01609 | (ER) | |||
338187.VIBHAR_05201 | (+) | (ER) | |||
338187.VIBHAR_06782 | PF01609 | (ER) | |||
338187.VIBHAR_05840 | PF01609 | (ER) | |||
338187.VIBHAR_00318 | PF13592 PF13551 | ||||
338187.VIBHAR_06014 | PF13276 PF00665 | ||||
338187.VIBHAR_06221 | PF01609 | (ER) | |||
338187.VIBHAR_06596 | + | PF00078 | |||
338187.VIBHAR_06775 | + | PF02371 | |||
338187.VIBHAR_01214 | (+) | ER | |||
338187.VIBHAR_02599 | PF02371 | plastid | |||
338187.VIBHAR_02591 | + | (plastid) | |||
338187.VIBHAR_02042 | (+) | (mitochondrial); (plastid) | |||
338187.VIBHAR_06600 | PF01609 | (ER) | |||
338187.VIBHAR_00353 | (>) | (mitochondrial) | |||
338187.VIBHAR_05658 | PF13276 PF00665 | ||||
338187.VIBHAR_05650 | PF13276 PF00665 | ||||
338187.VIBHAR_04789 | + | (mitochondrial); not used | |||
338187.VIBHAR_02836 | (+) | mitochondrial | |||
338187.VIBHAR_01946 | PF13276 PF00665 | ||||
338187.VIBHAR_03392 | + | (ER) | |||
338187.VIBHAR_07097 | + | (mitochondrial); not used | |||
338187.VIBHAR_00371 | PF13592 PF13551 | ||||
338187.VIBHAR_02365 | + | (>) | |||
338187.VIBHAR_02550 | PF01609 | (ER) | |||
338187.VIBHAR_02880 | (+) | ER | |||
338187.VIBHAR_02886 | PF13276 PF00665 | ||||
338187.VIBHAR_05616 | PF01609 | (ER) | |||
338187.VIBHAR_02343 | PF01609 | (ER) | |||
338187.VIBHAR_03587 | PF01609 | (plastid) | |||
338187.VIBHAR_00587 | PF01609 | (ER) | |||
338187.VIBHAR_01989 | (+) | mitochondrial; (mitochondrial) | |||
338187.VIBHAR_06664 | + | (mitochondrial) | |||
338187.VIBHAR_02327 | PF13276 PF00665 | ||||
338187.VIBHAR_01300 | + | plastid | |||
338187.VIBHAR_02511 | PF01609 | (ER) | |||
338187.VIBHAR_03487 | (+) | ER | |||
338187.VIBHAR_05302 | PF01609 | (ER) | |||
338187.VIBHAR_06149 | PF01609 | (ER) | |||
338187.VIBHAR_06330 | PF01609 | (ER) | |||
338187.VIBHAR_06332 | PF01609 | (ER) | |||
338187.VIBHAR_02793 | (+) | mitochondrial | |||
338187.VIBHAR_05144 | + | (ER) | |||
338187.VIBHAR_06166 | + | PF00078 | |||
338187.VIBHAR_05129 | PF01609 | (ER) | |||
338187.VIBHAR_06470 | PF01609 | (ER) | |||
338187.VIBHAR_05902 | PF01609 | (ER) | |||
338187.VIBHAR_05901 | PF01609 | (mitochondrial) | |||
338187.VIBHAR_01815 | (>) | (plastid) | |||
338187.VIBHAR_00191 | PF13592 PF13551 | ||||
338187.VIBHAR_06290 | PF01609 | (ER) | |||
338187.VIBHAR_01301 | + | plastid | |||
338187.VIBHAR_02848 | + | (plastid) | |||
338187.VIBHAR_02842 | PF01609 | (ER) | |||
338187.VIBHAR_05717 | PF01609 | (ER) | |||
338187.VIBHAR_02155 | PF13592 PF13358 | ||||
338187.VIBHAR_02151 | PF01609 | (ER) | |||
338187.VIBHAR_03470 | (+) | (mitochondrial) | |||
338187.VIBHAR_06437 | + | plastid | |||
338187.VIBHAR_00177 | PF13592 PF13551 | ||||
338187.VIBHAR_02438 | PF13276 PF00665 | ||||
338187.VIBHAR_06183 | PF13276 PF00665 | ||||
338187.VIBHAR_00547 | PF01609 | (ER) | |||
338187.VIBHAR_00811 | + | (ER) | |||
338187.VIBHAR_01147 | PF01609 | (ER) | |||
338187.VIBHAR_02175 | PF13592 PF13358 | ||||
338187.VIBHAR_02170 | PF13592 PF13551 | ||||
338187.VIBHAR_03171 | + | (plastid) | |||
338187.VIBHAR_03173 | + | (plastid) | |||
338187.VIBHAR_01280 | (+) | (mitochondrial); plastid | |||
338187.VIBHAR_01289 | + | (plastid) | |||
338187.VIBHAR_02412 | PF13276 PF00665 | ||||
338187.VIBHAR_05505 | PF01609 | (ER) | |||
338187.VIBHAR_05750 | PF13276 PF00665 | ||||
338187.VIBHAR_04930 | PF13592 PF13358 | ||||
338187.VIBHAR_02198 | + | (>) | |||
338187.VIBHAR_06476 | PF01609 | (ER) | |||
338187.VIBHAR_05564 | PF01609 | (ER) | |||
338187.VIBHAR_06869 | + | PF00078 | |||
338187.VIBHAR_03328 | PF01609 | (ER) | |||
338187.VIBHAR_03320 | PF01609 | (ER) | |||
338187.VIBHAR_01676 | PF01527 | (mitochondrial) | |||
338187.VIBHAR_01677 | (+) | PF13276 PF00665 | |||
338187.VIBHAR_01678 | PF01609 | (ER) | |||
338187.VIBHAR_01679 | PF01609 | (ER) | |||
338187.VIBHAR_01092 | PF13276 PF00665 | ||||
338187.VIBHAR_01894 | (+) | (mitochondrial) | |||
338187.VIBHAR_06040 | PF01609 | (ER) | |||
338187.VIBHAR_04910 | + | (plastid) | |||
338187.VIBHAR_06459 | PF01609 | (ER) | |||
338187.VIBHAR_05544 | PF13592 PF13358 | ||||
338187.VIBHAR_05239 | (+) | (mitochondrial) | |||
338187.VIBHAR_00537 | (+) | ER | |||
338187.VIBHAR_02011 | PF01609 | (mitochondrial) | |||
338187.VIBHAR_02012 | + | PF00078 | |||
338187.VIBHAR_03305 | (+) | (mitochondrial); (plastid) | |||
338187.VIBHAR_06798 | + | PF00078 | |||
338187.VIBHAR_00637 | (+) | mitochondrial; (mitochondrial) | |||
338187.VIBHAR_00322 | PF13592 PF13551 | ||||
338187.VIBHAR_04953 | + | plastid | |||
338187.VIBHAR_06585 | PF01609 | (ER) | |||
338187.VIBHAR_06589 | PF13592 PF13384 | ||||
338187.VIBHAR_00610 | + | (mitochondrial) | |||
338187.VIBHAR_02551 | (+) | (ER) | |||
338187.VIBHAR_00348 | (+) | ER | |||
338187.VIBHAR_02556 | (+) | (mitochondrial); (plastid) | |||
338187.VIBHAR_02557 | + | (ER) | |||
338187.VIBHAR_00840 | PF01609 | (ER) | |||
338187.VIBHAR_01565 | (<) | (ER); not used | |||
338187.VIBHAR_03453 | PF01609 | (ER) | |||
338187.VIBHAR_01480 | PF01609 | (ER) | |||
338187.VIBHAR_05076 | PF13592 PF13358 | ||||
338187.VIBHAR_06752 | + | PF00078 | |||
338187.VIBHAR_00369 | PF13592 PF13551 | ||||
338187.VIBHAR_01018 | PF13592 PF13551 | ||||
338187.VIBHAR_05621 | PF13276 PF00665 | ||||
338187.VIBHAR_03714 | PF13592 PF13551 | ||||
338187.VIBHAR_01716 | PF13592 PF13358 | ||||
338187.VIBHAR_01714 | PF13592 PF13358 | ||||
338187.VIBHAR_01711 | + | (plastid) | |||
338187.VIBHAR_05016 | (+) | (mitochondrial) | |||
338187.VIBHAR_02540 | + | (>) | |||
338187.VIBHAR_01035 | PF13592 PF13551 | ||||
338187.VIBHAR_05605 | PF01609 | (ER) | |||
338187.VIBHAR_01514 | (+) | (ER) | |||
338187.VIBHAR_01503 | PF13276 PF00665 | ||||
338187.VIBHAR_06082 | PF13551 | (mitochondrial) | |||
338187.VIBHAR_06083 | + | (<) | not used | ||
338187.VIBHAR_06080 | PF13276 PF00665 | ||||
338187.VIBHAR_06908 | PF01609 | (ER) | |||
338187.VIBHAR_07124 | PF01609 | (ER) | |||
338187.VIBHAR_00699 | PF13276 PF00665 | ||||
338187.VIBHAR_00697 | (<) | (mitochondrial) | |||
338187.VIBHAR_05176 | PF01609 | (ER) | |||
338187.VIBHAR_03152 | (+) | (ER) | |||
338187.VIBHAR_05431 | PF01609 | (ER) | |||
338187.VIBHAR_07009 | PF01609 | (ER) | |||
338187.VIBHAR_05897 | PF13592 PF13358 | ||||
338187.VIBHAR_05898 | PF01609 | (ER) | |||
338187.VIBHAR_00886 | (+) | (mitochondrial) | |||
338187.VIBHAR_02816 | PF01609 | (ER) | |||
338187.VIBHAR_02813 | PF13276 PF00665 | ||||
338187.VIBHAR_00617 | + | plastid | |||
338187.VIBHAR_02480 | PF01609 | (ER) | |||
338187.VIBHAR_06561 | PF13276 PF00665 | ||||
338187.VIBHAR_00244 | PF01609 | (ER) | |||
338187.VIBHAR_02879 | + | (ER) | |||
338187.VIBHAR_01802 | PF13592 PF13551 | ||||
338187.VIBHAR_06971 | PF13592 PF13358 | ||||
338187.VIBHAR_00185 | PF13592 PF13551 | ||||
338187.VIBHAR_00187 | PF13592 PF13551 | ||||
338187.VIBHAR_00189 | PF13592 PF13551 | ||||
338187.VIBHAR_05114 | PF01609 | (ER) | |||
338187.VIBHAR_06115 | PF01609 | (ER) | |||
338187.VIBHAR_06347 | PF01609 | (ER) | |||
338187.VIBHAR_01820 | + | (plastid) | |||
338187.VIBHAR_00168 | (+) | (mitochondrial) | |||
338187.VIBHAR_05530 | (+) | ER | |||
338187.VIBHAR_05538 | + | (mitochondrial); not used | |||
338187.VIBHAR_00574 | (+) | plastid | |||
338187.VIBHAR_03376 | + | ||||
338187.VIBHAR_00397 | + | ||||
338187.VIBHAR_01628 | PF03050 | ||||
338187.VIBHAR_01156 | PF01609 | ||||
338187.VIBHAR_05700 | PF01609 | ||||
338187.VIBHAR_05703 | + | ||||
338187.VIBHAR_01846 | PF00078 | ||||
338187.VIBHAR_01844 | PF00078 | ||||
338187.VIBHAR_02167 | PF10462 | ||||
338187.VIBHAR_02169 | PF10462 | ||||
338187.VIBHAR_04766 | + | ||||
338187.VIBHAR_00497 | PF01609 | ||||
338187.VIBHAR_00321 | PF13358 | ||||
338187.VIBHAR_00323 | PF13358 | ||||
338187.VIBHAR_04830 | (>) | ||||
338187.VIBHAR_03159 | (>) | ||||
338187.VIBHAR_02424 | (<) | ||||
338187.VIBHAR_02426 | PF00078 | ||||
338187.VIBHAR_02421 | + | ||||
338187.VIBHAR_02395 | + | ||||
338187.VIBHAR_02390 | + | not used | |||
338187.VIBHAR_00558 | PF01609 | ||||
338187.VIBHAR_00557 | PF01609 | ||||
338187.VIBHAR_00552 | (+) | (plastid) | |||
338187.VIBHAR_03357 | PF03050 | ||||
338187.VIBHAR_00807 | (>) | ||||
338187.VIBHAR_05721 | PF01609 | ||||
338187.VIBHAR_01863 | PF01527 | ||||
338187.VIBHAR_01865 | PF01609 | ||||
338187.VIBHAR_06074 | PF01609 | ||||
338187.VIBHAR_04929 | + | ||||
338187.VIBHAR_02188 | PF01609 | ||||
338187.VIBHAR_06402 | PF03050 | ||||
338187.VIBHAR_03294 | + | ||||
338187.VIBHAR_03297 | PF01609 | ||||
338187.VIBHAR_03299 | + | ||||
338187.VIBHAR_01296 | PF00078 | ||||
338187.VIBHAR_01297 | + | ||||
338187.VIBHAR_01292 | + | ||||
338187.VIBHAR_06243 | + | ||||
338187.VIBHAR_06245 | PF01609 | ||||
338187.VIBHAR_01472 | + | not used | |||
338187.VIBHAR_01473 | PF02371 | ||||
338187.VIBHAR_01470 | PF01609 | ||||
338187.VIBHAR_01471 | + | ||||
338187.VIBHAR_01476 | PF01609 | ||||
338187.VIBHAR_01475 | PF02371 | ||||
338187.VIBHAR_02401 | PF03050 | ||||
338187.VIBHAR_05572 | PF01609 | ||||
338187.VIBHAR_01152 | PF01609 | ||||
338187.VIBHAR_01626 | PF03050 | ||||
338187.VIBHAR_03030 | PF00078 | ||||
338187.VIBHAR_03031 | PF01609 | ||||
338187.VIBHAR_06425 | + | ||||
338187.VIBHAR_06878 | PF03050 | ||||
338187.VIBHAR_03337 | + | ||||
338187.VIBHAR_03330 | PF02371 | ||||
338187.VIBHAR_01667 | PF01527 | ||||
338187.VIBHAR_01665 | + | ||||
338187.VIBHAR_01664 | PF01609 | ||||
338187.VIBHAR_00829 | (>) | ||||
338187.VIBHAR_01083 | PF00078 | ||||
338187.VIBHAR_05744 | PF00665 | ||||
338187.VIBHAR_05740 | PF01609 | ||||
338187.VIBHAR_05741 | PF01527 | ||||
338187.VIBHAR_05743 | (+) | PF01527 | |||
338187.VIBHAR_06055 | PF03050 | ||||
338187.VIBHAR_00457 | PF01609 | ||||
338187.VIBHAR_06260 | PF01609 | ||||
338187.VIBHAR_05087 | PF01609 | ||||
338187.VIBHAR_05084 | PF01609 | ||||
338187.VIBHAR_02686 | + | ||||
338187.VIBHAR_05550 | PF02371 | ||||
338187.VIBHAR_05220 | + | not used | |||
338187.VIBHAR_02025 | PF03050 | ||||
338187.VIBHAR_03315 | + | ||||
338187.VIBHAR_01646 | PF03050 | ||||
338187.VIBHAR_00844 | PF03050 | ||||
338187.VIBHAR_00663 | + | ||||
338187.VIBHAR_00664 | + | ||||
338187.VIBHAR_05766 | (+) | (plastid) | |||
338187.VIBHAR_06031 | PF00665 | ||||
338187.VIBHAR_06030 | (+) | PF01527 | |||
338187.VIBHAR_06441 | PF03050 | ||||
338187.VIBHAR_00475 | PF13358 | ||||
338187.VIBHAR_00474 | PF13358 | ||||
338187.VIBHAR_00783 | PF01609 | ||||
338187.VIBHAR_00781 | + | ||||
338187.VIBHAR_01758 | + | ||||
338187.VIBHAR_01781 | (<) | ||||
338187.VIBHAR_01783 | PF03050 | ||||
338187.VIBHAR_03140 | (<) | ||||
338187.VIBHAR_01925 | PF01609 | ||||
338187.VIBHAR_01926 | PF02371 | ||||
338187.VIBHAR_01927 | + | not used | |||
338187.VIBHAR_05204 | + | ||||
338187.VIBHAR_05202 | (<) | ||||
338187.VIBHAR_05209 | PF03050 | ||||
338187.VIBHAR_02009 | PF01609 | ||||
338187.VIBHAR_02006 | PF02371 | ||||
338187.VIBHAR_02007 | PF01609 | ||||
338187.VIBHAR_02005 | + | not used | |||
338187.VIBHAR_06784 | + | not used | |||
338187.VIBHAR_06787 | PF03050 | ||||
338187.VIBHAR_06838 | + | ||||
338187.VIBHAR_05841 | PF01609 | ||||
338187.VIBHAR_05844 | + | not used | |||
338187.VIBHAR_00319 | PF13358 | ||||
338187.VIBHAR_06015 | PF01527 | ||||
338187.VIBHAR_00147 | PF01609 | ||||
338187.VIBHAR_00141 | PF00078 | ||||
338187.VIBHAR_04943 | PF00665 | ||||
338187.VIBHAR_04944 | (+) | PF01527 | |||
338187.VIBHAR_00413 | (<) | ||||
338187.VIBHAR_06227 | (<) | ||||
338187.VIBHAR_05045 | + | ||||
338187.VIBHAR_01141 | (+) | (<) | |||
338187.VIBHAR_01909 | + | ||||
338187.VIBHAR_01905 | PF01609 | ||||
338187.VIBHAR_06484 | PF03050 | ||||
338187.VIBHAR_05268 | + | ||||
338187.VIBHAR_05263 | PF03050 | ||||
338187.VIBHAR_05260 | + | ||||
338187.VIBHAR_04888 | PF01609 | ||||
338187.VIBHAR_04884 | + | ||||
338187.VIBHAR_04885 | (+) | (mitochondrial); not used | |||
338187.VIBHAR_06819 | + | ||||
338187.VIBHAR_00623 | + | ||||
338187.VIBHAR_02051 | PF03050 | ||||
338187.VIBHAR_02725 | + | not used | |||
338187.VIBHAR_05673 | (PF05932) | ||||
338187.VIBHAR_05674 | + | ||||
338187.VIBHAR_02901 | (<) | ||||
338187.VIBHAR_06592 | + | ||||
338187.VIBHAR_00295 | (PF05706) | ||||
338187.VIBHAR_00293 | PF01609 | ||||
338187.VIBHAR_06773 | PF01609 | ||||
338187.VIBHAR_06776 | + | not used | |||
338187.VIBHAR_01740 | (+) | (PF07720) | |||
338187.VIBHAR_01210 | PF02371 | ||||
338187.VIBHAR_05068 | PF03050 | ||||
338187.VIBHAR_05063 | (+) | (plastid) | |||
338187.VIBHAR_06609 | PF00078 | ||||
338187.VIBHAR_06740 | + | ||||
338187.VIBHAR_05802 | + | ||||
338187.VIBHAR_05800 | + | ||||
338187.VIBHAR_00972 | PF02371 | ||||
338187.VIBHAR_00975 | + | ||||
338187.VIBHAR_01555 | + | ||||
338187.VIBHAR_05659 | PF01527 | ||||
338187.VIBHAR_05657 | PF01609 | ||||
338187.VIBHAR_00347 | (>) | ||||
338187.VIBHAR_03099 | + | ||||
338187.VIBHAR_03093 | PF01609 | ||||
338187.VIBHAR_01741 | + | ||||
338187.VIBHAR_01745 | (<) | ||||
338187.VIBHAR_01746 | PF01609 | ||||
338187.VIBHAR_00012 | + | ||||
338187.VIBHAR_00016 | PF01609 | ||||
338187.VIBHAR_05004 | + | not used | |||
338187.VIBHAR_01947 | PF01527 | ||||
338187.VIBHAR_01941 | PF03050 | ||||
338187.VIBHAR_06628 | (+) | (>) | |||
338187.VIBHAR_06626 | + | not used | |||
338187.VIBHAR_03395 | (>) | ||||
338187.VIBHAR_05822 | PF03050 | ||||
338187.VIBHAR_00372 | PF13358 | ||||
338187.VIBHAR_00370 | PF13358 | ||||
338187.VIBHAR_02882 | PF00665 | ||||
338187.VIBHAR_00950 | PF01609 | ||||
338187.VIBHAR_00951 | (PF01786) | ||||
338187.VIBHAR_01535 | + | ||||
338187.VIBHAR_02641 | PF01609 | ||||
338187.VIBHAR_03017 | PF00078 | ||||
338187.VIBHAR_06534 | PF01609 | ||||
338187.VIBHAR_03704 | PF01609 | ||||
338187.VIBHAR_01706 | + | ||||
338187.VIBHAR_01708 | + | ||||
338187.VIBHAR_02265 | + | ||||
338187.VIBHAR_02645 | + | ||||
338187.VIBHAR_05021 | + | not used | |||
338187.VIBHAR_04732 | PF00665 | ||||
338187.VIBHAR_04733 | (+) | PF01527 | |||
338187.VIBHAR_02889 | PF03050 | ||||
338187.VIBHAR_02883 | + | ||||
338187.VIBHAR_02881 | (+) | PF01527 | |||
338187.VIBHAR_02887 | PF01527 | ||||
338187.VIBHAR_06393 | PF01609 | ||||
338187.VIBHAR_02776 | + | ||||
338187.VIBHAR_02083 | PF03050 | ||||
338187.VIBHAR_06704 | PF01609 | ||||
338187.VIBHAR_06706 | + | not used | |||
338187.VIBHAR_07079 | PF00665 | ||||
338187.VIBHAR_02044 | (+) | PF01527 | |||
338187.VIBHAR_02043 | PF00665 | ||||
338187.VIBHAR_00934 | PF01609 | ||||
338187.VIBHAR_06091 | (<) | ||||
338187.VIBHAR_05341 | + | ||||
338187.VIBHAR_05345 | + | ||||
338187.VIBHAR_01728 | + | ||||
338187.VIBHAR_01720 | (PF05932) | ||||
338187.VIBHAR_03586 | PF01609 | ||||
338187.VIBHAR_01188 | PF01609 | ||||
338187.VIBHAR_01181 | PF03050 | ||||
338187.VIBHAR_00051 | (>) | ||||
338187.VIBHAR_04758 | + | ||||
338187.VIBHAR_04757 | + | ||||
338187.VIBHAR_02577 | PF01609 | ||||
338187.VIBHAR_02574 | PF03050 | ||||
338187.VIBHAR_02575 | PF02371 | ||||
338187.VIBHAR_02579 | PF01609 | ||||
338187.VIBHAR_04807 | + | ||||
338187.VIBHAR_04800 | PF00078 | ||||
338187.VIBHAR_05408 | + | ||||
338187.VIBHAR_02755 | (<) | ||||
338187.VIBHAR_07051 | PF01609 | ||||
338187.VIBHAR_06986 | PF03050 | ||||
338187.VIBHAR_00916 | (<) | not used | |||
338187.VIBHAR_01062 | PF01609 | ||||
338187.VIBHAR_05185 | (<) | ||||
338187.VIBHAR_05183 | + | ||||
338187.VIBHAR_02326 | PF01527 | ||||
338187.VIBHAR_02820 | PF01609 | ||||
338187.VIBHAR_02827 | (PF02631) | ||||
338187.VIBHAR_06510 | (+) | (mitochondrial) | |||
338187.VIBHAR_05967 | PF01609 | ||||
338187.VIBHAR_00074 | + | ||||
338187.VIBHAR_00077 | + | ||||
338187.VIBHAR_05790 | PF01609 | ||||
338187.VIBHAR_05796 | + | ||||
338187.VIBHAR_01305 | (+) | PF00078 | |||
338187.VIBHAR_02515 | + | ||||
338187.VIBHAR_02510 | PF16683 | ||||
338187.VIBHAR_02644 | PF03050 | ||||
338187.VIBHAR_03267 | PF01609 | ||||
338187.VIBHAR_03266 | PF00078 | ||||
338187.VIBHAR_03262 | + | ||||
338187.VIBHAR_06542 | + | ||||
338187.VIBHAR_00271 | PF00078 | ||||
338187.VIBHAR_00092 | + | ||||
338187.VIBHAR_06333 | PF00078 | ||||
338187.VIBHAR_02791 | (+) | (plastid) | |||
338187.VIBHAR_02797 | (+) | PF01527 | |||
338187.VIBHAR_02798 | PF00665 | ||||
338187.VIBHAR_02799 | PF02371 | ||||
338187.VIBHAR_05441 | PF01609 | ||||
338187.VIBHAR_06943 | + | ||||
338187.VIBHAR_06945 | PF01609 | ||||
338187.VIBHAR_06944 | (+) | + | not used | ||
338187.VIBHAR_06490 | (+) | PF01527 | |||
338187.VIBHAR_05145 | + | ||||
338187.VIBHAR_02490 | PF00078 | ||||
338187.VIBHAR_02492 | PF01609 | ||||
338187.VIBHAR_02494 | PF01609 | ||||
338187.VIBHAR_02496 | PF01609 | ||||
338187.VIBHAR_02676 | (>) | ||||
338187.VIBHAR_05929 | PF03050 | ||||
338187.VIBHAR_03694 | + | ||||
338187.VIBHAR_00521 | + | not used | |||
338187.VIBHAR_01699 | (PF05932) | ||||
338187.VIBHAR_01695 | + | not used | |||
338187.VIBHAR_02807 | + | not used | |||
338187.VIBHAR_02809 | + | not used | |||
338187.VIBHAR_06317 | PF00078 | ||||
338187.VIBHAR_01348 | (>) | ||||
338187.VIBHAR_01349 | PF02371 | ||||
338187.VIBHAR_05463 | PF00078 | ||||
338187.VIBHAR_02110 | + | ||||
338187.VIBHAR_01596 | + | ||||
338187.VIBHAR_00759 | PF00078 | ||||
338187.VIBHAR_01761 | + | ||||
338187.VIBHAR_02616 | PF01609 | ||||
338187.VIBHAR_02613 | PF01609 | ||||
338187.VIBHAR_06105 | + | ||||
338187.VIBHAR_06103 | (+) | (plastid) | |||
338187.VIBHAR_03055 | + | ||||
338187.VIBHAR_05906 | PF03050 | ||||
338187.VIBHAR_05903 | PF13551 | ||||
338187.VIBHAR_00504 | + | ||||
338187.VIBHAR_00643 | (<) | ||||
338187.VIBHAR_01103 | PF03050 | ||||
338187.VIBHAR_02869 | (>) | ||||
338187.VIBHAR_06379 | PF00078 | ||||
338187.VIBHAR_01364 | (+) | (<) | |||
338187.VIBHAR_01811 | PF00078 | ||||
338187.VIBHAR_05485 | + | ||||
338187.VIBHAR_02137 | + | ||||
338187.VIBHAR_04997 | PF01609 | ||||
338187.VIBHAR_06905 | + | not used | |||
338187.VIBHAR_01017 | PF13358 | ||||
338187.VIBHAR_00192 | PF13358 | ||||
338187.VIBHAR_00190 | PF13358 | ||||
338187.VIBHAR_00773 | + | ||||
338187.VIBHAR_06292 | (+) | (mitochondrial) | |||
338187.VIBHAR_00350 | PF00078 | ||||
338187.VIBHAR_06550 | + | ||||
338187.VIBHAR_00562 | + | ||||
338187.VIBHAR_01302 | (+) | (mitochondrial) | |||
338187.VIBHAR_00381 | + | ||||
338187.VIBHAR_01162 | + | ||||
338187.VIBHAR_01381 | PF02371 | ||||
338187.VIBHAR_01382 | PF02371 | ||||
338187.VIBHAR_02156 | PF01609 | ||||
338187.VIBHAR_06951 | PF01609 | ||||
338187.VIBHAR_06955 | (PF02839) | ||||
338187.VIBHAR_06929 | + | not used | |||
338187.VIBHAR_06438 | + | not used | |||
338187.VIBHAR_06431 | + | ||||
338187.VIBHAR_00179 | PF03050 | ||||
338187.VIBHAR_00175 | + | ||||
338187.VIBHAR_00718 | PF02371 | ||||
338187.VIBHAR_00717 | PF02371 | ||||
338187.VIBHAR_00712 | PF02371 | ||||
338187.VIBHAR_02439 | PF01527 | ||||
338187.VIBHAR_05522 | PF03050 | ||||
338187.VIBHAR_05528 | + | ||||
338187.VIBHAR_06182 | PF01527 | ||||
338187.VIBHAR_00540 | PF03050 | ||||
338187.VIBHAR_00545 | + | not used | |||
338187.VIBHAR_03369 | (>) | ||||
338187.VIBHAR_01148 | PF03050 | ||||
338187.VIBHAR_02171 | PF13358 | ||||
338187.VIBHAR_01692 | + | ||||
338187.VIBHAR_01693 | (PF05932) | ||||
338187.VIBHAR_01127 | PF01609 | ||||
338187.VIBHAR_03177 | + | ||||
338187.VIBHAR_03170 | + | ||||
338187.VIBHAR_03172 | PF01609 | ||||
338187.VIBHAR_00156 | + | ||||
338187.VIBHAR_01282 | (>) | ||||
338187.VIBHAR_01287 | (+) | plastid | |||
338187.VIBHAR_06255 | + | ||||
338187.VIBHAR_01464 | + | not used | |||
338187.VIBHAR_01467 | PF03050 | ||||
338187.VIBHAR_01461 | PF03050 | ||||
338187.VIBHAR_02410 | PF03050 | ||||
338187.VIBHAR_02413 | PF01527 | ||||
338187.VIBHAR_05509 | PF01609 | ||||
338187.VIBHAR_05503 | + | ||||
338187.VIBHAR_05501 | + | ||||
338187.VIBHAR_00316 | + | ||||
338187.VIBHAR_00831 | (>) | ||||
338187.VIBHAR_05757 | PF03050 | ||||
338187.VIBHAR_05755 | PF00665 | ||||
338187.VIBHAR_05754 | (+) | PF01527 | |||
338187.VIBHAR_05752 | + | not used | |||
338187.VIBHAR_05751 | PF01527 | ||||
338187.VIBHAR_02195 | (PF02839) | ||||
338187.VIBHAR_02197 | (<) | ||||
338187.VIBHAR_03113 | PF01609 | ||||
338187.VIBHAR_03119 | PF00078 | ||||
338187.VIBHAR_01262 | PF02371 | ||||
338187.VIBHAR_06275 | PF01609 | ||||
338187.VIBHAR_06276 | (+) | mitochondrial; not used | |||
338187.VIBHAR_06271 | + | ||||
338187.VIBHAR_06273 | + | ||||
338187.VIBHAR_01400 | (+) | (plastid) | |||
338187.VIBHAR_05567 | + | not used | |||
338187.VIBHAR_05560 | PF02371 | ||||
338187.VIBHAR_05987 | PF01609 | ||||
338187.VIBHAR_05984 | (<) | not used | |||
338187.VIBHAR_05982 | PF01609 | ||||
338187.VIBHAR_05981 | PF01609 | ||||
338187.VIBHAR_03329 | + | ||||
338187.VIBHAR_03325 | (>) | ||||
338187.VIBHAR_01670 | PF01609 | ||||
338187.VIBHAR_00673 | (>) | ||||
338187.VIBHAR_00676 | + | ||||
338187.VIBHAR_01090 | PF00078 | ||||
338187.VIBHAR_01093 | PF01527 | ||||
338187.VIBHAR_01099 | PF01609 | ||||
338187.VIBHAR_01892 | + | ||||
338187.VIBHAR_02208 | + | ||||
338187.VIBHAR_06049 | PF00078 | ||||
338187.VIBHAR_06046 | + | not used | |||
338187.VIBHAR_04913 | (+) | (plastid) | |||
338187.VIBHAR_04911 | (+) | + | |||
338187.VIBHAR_06969 | PF00665 | ||||
338187.VIBHAR_06965 | PF03050 | ||||
338187.VIBHAR_06458 | (+) | PF00078 | |||
338187.VIBHAR_00448 | PF01609 | ||||
338187.VIBHAR_00442 | + | ||||
338187.VIBHAR_01790 | PF02371 | ||||
338187.VIBHAR_05094 | + | ||||
338187.VIBHAR_06219 | PF00665 | ||||
338187.VIBHAR_01930 | PF03050 | ||||
338187.VIBHAR_01937 | PF03050 | ||||
338187.VIBHAR_01939 | + | ||||
338187.VIBHAR_02018 | PF03050 | ||||
338187.VIBHAR_06843 | (+) | (mitochondrial) | |||
338187.VIBHAR_03650 | PF00078 | ||||
338187.VIBHAR_01658 | PF03050 | ||||
338187.VIBHAR_00872 | + | ||||
338187.VIBHAR_05227 | + | ||||
338187.VIBHAR_06020 | (+) | (>) | |||
338187.VIBHAR_04974 | + | ||||
338187.VIBHAR_04975 | (PF09811) | ||||
338187.VIBHAR_04973 | + | ||||
338187.VIBHAR_00797 | PF01609 | ||||
338187.VIBHAR_03512 | (PF02631) | ||||
338187.VIBHAR_03517 | + | ||||
338187.VIBHAR_03516 | PF01609 | ||||
338187.VIBHAR_01225 | PF01609 | ||||
338187.VIBHAR_06232 | + | ||||
338187.VIBHAR_02915 | PF02371 | ||||
338187.VIBHAR_05219 | PF02371 | ||||
338187.VIBHAR_05212 | PF13358 | ||||
338187.VIBHAR_05215 | + | ||||
338187.VIBHAR_02074 | + | ||||
338187.VIBHAR_02073 | + | ||||
338187.VIBHAR_04897 | + | ||||
338187.VIBHAR_04890 | + | not used | |||
338187.VIBHAR_06823 | PF03050 | ||||
338187.VIBHAR_03675 | (+) | (>) | |||
338187.VIBHAR_03670 | PF00078 | ||||
338187.VIBHAR_06003 | (+) | + | not used | ||
338187.VIBHAR_02242 | (>) | ||||
338187.VIBHAR_04959 | PF01609 | ||||
338187.VIBHAR_02832 | + | ||||
338187.VIBHAR_00405 | PF01609 | ||||
338187.VIBHAR_06497 | (>) | ||||
338187.VIBHAR_06588 | PF13358 | ||||
338187.VIBHAR_03531 | PF01609 | ||||
338187.VIBHAR_03538 | (>) | ||||
338187.VIBHAR_01209 | PF02371 | ||||
338187.VIBHAR_00115 | PF01609 | ||||
338187.VIBHAR_05059 | + | not used | |||
338187.VIBHAR_05053 | PF02371 | ||||
338187.VIBHAR_05054 | PF01609 | ||||
338187.VIBHAR_01977 | (>) | ||||
338187.VIBHAR_02583 | PF00078 | ||||
338187.VIBHAR_05272 | PF01609 | ||||
338187.VIBHAR_05580 | + | ||||
338187.VIBHAR_05586 | + | ||||
338187.VIBHAR_06779 | PF02371 | ||||
338187.VIBHAR_06804 | + | not used | |||
338187.VIBHAR_06801 | (PF02631) | ||||
338187.VIBHAR_05878 | PF01609 | ||||
338187.VIBHAR_00612 | (>) | ||||
338187.VIBHAR_00614 | + | ||||
338187.VIBHAR_00341 | PF00078 | ||||
338187.VIBHAR_01562 | + | not used | |||
338187.VIBHAR_05642 | + | ||||
338187.VIBHAR_05649 | PF01527 | ||||
338187.VIBHAR_02919 | PF01609 | ||||
338187.VIBHAR_06972 | PF03050 | ||||
338187.VIBHAR_00422 | + | ||||
338187.VIBHAR_00423 | + | ||||
338187.VIBHAR_03088 | + | ||||
338187.VIBHAR_00289 | PF01609 | ||||
338187.VIBHAR_01775 | PF02371 | ||||
338187.VIBHAR_01770 | PF01609 | ||||
338187.VIBHAR_01773 | + | ||||
338187.VIBHAR_01487 | PF03050 | ||||
338187.VIBHAR_01484 | PF03050 | ||||
338187.VIBHAR_01488 | PF03050 | ||||
338187.VIBHAR_05075 | PF03050 | ||||
338187.VIBHAR_01951 | + | ||||
338187.VIBHAR_01950 | + | ||||
338187.VIBHAR_04857 | + | not used | |||
338187.VIBHAR_07081 | (+) | PF01527 | |||
338187.VIBHAR_05810 | (+) | (ER); not used | |||
338187.VIBHAR_00363 | + | ||||
338187.VIBHAR_01542 | + | ||||
338187.VIBHAR_05629 | + | ||||
338187.VIBHAR_05626 | PF03050 | ||||
338187.VIBHAR_05623 | (>) | ||||
338187.VIBHAR_05620 | PF01527 | ||||
338187.VIBHAR_03715 | PF13358 | ||||
338187.VIBHAR_01717 | (+) | PF01527 | |||
338187.VIBHAR_01712 | (PF05932) | ||||
338187.VIBHAR_01710 | + | ||||
338187.VIBHAR_01718 | PF00665 | ||||
338187.VIBHAR_03578 | + | ||||
338187.VIBHAR_00004 | + | ||||
338187.VIBHAR_06440 | + | not used | |||
338187.VIBHAR_04723 | + | ||||
338187.VIBHAR_02895 | PF01609 | ||||
338187.VIBHAR_02898 | PF01609 | ||||
338187.VIBHAR_06389 | (+) | plastid | |||
338187.VIBHAR_04875 | + | ||||
338187.VIBHAR_04870 | PF01609 | ||||
338187.VIBHAR_02098 | + | ||||
338187.VIBHAR_02094 | PF03050 | ||||
338187.VIBHAR_07069 | + | not used | |||
338187.VIBHAR_01036 | PF13358 | ||||
338187.VIBHAR_02954 | (<) | ||||
338187.VIBHAR_02956 | PF03050 | ||||
338187.VIBHAR_05353 | PF01609 | ||||
338187.VIBHAR_02377 | PF03050 | ||||
338187.VIBHAR_02652 | PF00078 | ||||
338187.VIBHAR_01739 | + | ||||
338187.VIBHAR_01731 | + | ||||
338187.VIBHAR_01194 | + | ||||
338187.VIBHAR_01993 | (+) | (<) | |||
338187.VIBHAR_05032 | + | ||||
338187.VIBHAR_05030 | + | ||||
338187.VIBHAR_05296 | PF00665 | ||||
338187.VIBHAR_05295 | (+) | PF01527 | |||
338187.VIBHAR_02565 | PF01609 | ||||
338187.VIBHAR_04812 | + | ||||
338187.VIBHAR_01502 | PF01527 | ||||
338187.VIBHAR_02979 | PF03050 | ||||
338187.VIBHAR_02974 | PF01609 | ||||
338187.VIBHAR_02975 | PF00078 | ||||
338187.VIBHAR_06087 | (+) | (>) | |||
338187.VIBHAR_06084 | PF01609 | ||||
338187.VIBHAR_06081 | PF01527 | ||||
338187.VIBHAR_05374 | PF03050 | ||||
338187.VIBHAR_05378 | + | ||||
338187.VIBHAR_02351 | + | ||||
338187.VIBHAR_05973 | + | ||||
338187.VIBHAR_00044 | + | ||||
338187.VIBHAR_02501 | + | ||||
338187.VIBHAR_04833 | (<) | ||||
338187.VIBHAR_06996 | PF00078 | ||||
338187.VIBHAR_03259 | PF01609 | ||||
338187.VIBHAR_01079 | PF01609 | ||||
338187.VIBHAR_01075 | + | ||||
338187.VIBHAR_05171 | (>) | ||||
338187.VIBHAR_05175 | PF01609 | ||||
338187.VIBHAR_05311 | (<) | ||||
338187.VIBHAR_05310 | PF01609 | ||||
338187.VIBHAR_00994 | PF01609 | ||||
338187.VIBHAR_02331 | + | ||||
338187.VIBHAR_03003 | PF03050 | ||||
338187.VIBHAR_00064 | + | ||||
338187.VIBHAR_00060 | (+) | (plastid) | |||
338187.VIBHAR_02831 | (PF05932) | ||||
338187.VIBHAR_05432 | + | not used | |||
338187.VIBHAR_02785 | + | ||||
338187.VIBHAR_05895 | PF01609 | ||||
338187.VIBHAR_05890 | + | ||||
338187.VIBHAR_06150 | + | not used | |||
338187.VIBHAR_06152 | PF01609 | ||||
338187.VIBHAR_06549 | (+) | mitochondrial; not used | |||
338187.VIBHAR_00080 | (<) | ||||
338187.VIBHAR_01686 | PF01609 | ||||
338187.VIBHAR_02818 | + | not used | |||
338187.VIBHAR_02814 | PF01527 | ||||
338187.VIBHAR_02817 | (+) | PF02371 | |||
338187.VIBHAR_02811 | PF01609 | ||||
338187.VIBHAR_02812 | PF02371 | ||||
338187.VIBHAR_05454 | PF03050 | ||||
338187.VIBHAR_02105 | + | ||||
338187.VIBHAR_06489 | PF00665 | ||||
338187.VIBHAR_03475 | PF02371 | ||||
338187.VIBHAR_03476 | PF00078 | ||||
338187.VIBHAR_03477 | + | ||||
338187.VIBHAR_03210 | + | ||||
338187.VIBHAR_03212 | + | ||||
338187.VIBHAR_05686 | (+) | (mitochondrial); not used | |||
338187.VIBHAR_03439 | PF02371 | ||||
338187.VIBHAR_05910 | PF01609 | ||||
338187.VIBHAR_05913 | + | not used | |||
338187.VIBHAR_05912 | + | ||||
338187.VIBHAR_05916 | PF00078 | ||||
338187.VIBHAR_01118 | PF01609 | ||||
338187.VIBHAR_01110 | + | ||||
338187.VIBHAR_02873 | PF03050 | ||||
338187.VIBHAR_01801 | PF13358 | ||||
338187.VIBHAR_05476 | PF00665 | ||||
338187.VIBHAR_05475 | (+) | PF01527 | |||
338187.VIBHAR_05473 | + | ||||
338187.VIBHAR_02124 | + | ||||
338187.VIBHAR_02121 | + | ||||
338187.VIBHAR_02123 | (PF08732) | ||||
338187.VIBHAR_06460 | PF00078 | ||||
338187.VIBHAR_06976 | (<) | ||||
338187.VIBHAR_06978 | PF00665 | ||||
338187.VIBHAR_06979 | (+) | PF01527 | |||
338187.VIBHAR_01588 | + | ||||
338187.VIBHAR_01584 | PF01609 | ||||
338187.VIBHAR_00184 | PF13358 | ||||
338187.VIBHAR_00188 | PF13358 | ||||
338187.VIBHAR_02462 | + | ||||
338187.VIBHAR_02603 | PF02371 | ||||
338187.VIBHAR_06112 | + | ||||
338187.VIBHAR_03025 | PF01609 | ||||
338187.VIBHAR_00511 | PF02371 | ||||
338187.VIBHAR_01174 | + | ||||
338187.VIBHAR_02851 | + | ||||
338187.VIBHAR_06348 | (+) | (plastid) | |||
338187.VIBHAR_00658 | (PF05686) | ||||
338187.VIBHAR_01823 | + | ||||
338187.VIBHAR_05494 | (>) | ||||
338187.VIBHAR_02147 | PF01527 | ||||
338187.VIBHAR_02146 | PF13358 | ||||
338187.VIBHAR_02145 | + | ||||
338187.VIBHAR_02144 | + | ||||
338187.VIBHAR_02142 | PF03050 | ||||
338187.VIBHAR_06792 | PF03050 | ||||
338187.VIBHAR_02442 | PF03050 | ||||
338187.VIBHAR_06289 | PF01609 | ||||
338187.VIBHAR_05535 | + | not used | |||
338187.VIBHAR_02629 | (>) | ||||
338187.VIBHAR_01629 | (+) | not used | |||
338187.VIBHAR_05704 | (+) | ||||
338187.VIBHAR_01843 | (+) | ||||
338187.VIBHAR_04764 | (+) | ||||
338187.VIBHAR_06939 | (+) | ||||
338187.VIBHAR_06897 | (+) | not used | |||
338187.VIBHAR_06071 | (+) | not used | |||
338187.VIBHAR_04926 | (+) | ||||
338187.VIBHAR_03291 | (+) | ||||
338187.VIBHAR_00124 | (+) | ||||
338187.VIBHAR_01295 | (+) | ||||
338187.VIBHAR_01298 | (+) | ||||
338187.VIBHAR_06248 | (+) | ||||
338187.VIBHAR_05749 | (+) | ||||
338187.VIBHAR_04906 | (+) | ||||
338187.VIBHAR_06764 | (+) | not used | |||
338187.VIBHAR_05555 | (+) | ||||
338187.VIBHAR_06859 | (+) | not used | |||
338187.VIBHAR_03640 | (+) | ||||
338187.VIBHAR_02239 | (+) | ||||
338187.VIBHAR_02238 | (+) | ||||
338187.VIBHAR_04964 | (+) | ||||
338187.VIBHAR_04773 | (+) | ||||
338187.VIBHAR_00478 | (+) | ||||
338187.VIBHAR_01786 | (+) | ||||
338187.VIBHAR_01251 | (+) | ||||
338187.VIBHAR_06839 | (+) | ||||
338187.VIBHAR_03665 | (+) | ||||
338187.VIBHAR_06810 | (+) | ||||
338187.VIBHAR_05869 | (+) | ||||
338187.VIBHAR_00339 | (+) | ||||
338187.VIBHAR_01572 | (+) | ||||
338187.VIBHAR_06591 | (+) | ||||
338187.VIBHAR_01748 | (+) | ||||
338187.VIBHAR_05804 | (+) | ||||
338187.VIBHAR_00970 | (+) | ||||
338187.VIBHAR_01005 | (+) | ||||
338187.VIBHAR_01766 | (+) | ||||
338187.VIBHAR_00616 | (+) | ||||
338187.VIBHAR_03546 | (+) | ||||
338187.VIBHAR_01492 | (+) | not used | |||
338187.VIBHAR_00014 | (+) | ||||
338187.VIBHAR_05006 | (+) | ||||
338187.VIBHAR_05003 | (+) | ||||
338187.VIBHAR_02303 | (+) | ||||
338187.VIBHAR_01539 | (+) | ||||
338187.VIBHAR_03608 | (+) | ||||
338187.VIBHAR_05633 | (+) | ||||
338187.VIBHAR_02363 | (+) | ||||
338187.VIBHAR_06533 | (+) | ||||
338187.VIBHAR_06536 | (+) | ||||
338187.VIBHAR_02266 | (+) | ||||
338187.VIBHAR_05028 | (+) | ||||
338187.VIBHAR_04737 | (+) | ||||
338187.VIBHAR_06399 | (+) | ||||
338187.VIBHAR_06394 | (+) | ||||
338187.VIBHAR_06395 | (+) | ||||
338187.VIBHAR_04866 | (+) | ||||
338187.VIBHAR_02087 | (+) | ||||
338187.VIBHAR_06708 | (+) | ||||
338187.VIBHAR_07112 | (+) | ||||
338187.VIBHAR_07110 | (+) | not used | |||
338187.VIBHAR_07076 | (+) | not used | |||
338187.VIBHAR_02734 | (+) | ||||
338187.VIBHAR_01042 | (+) | ||||
338187.VIBHAR_02963 | (+) | ||||
338187.VIBHAR_06092 | (+) | not used | |||
338187.VIBHAR_06096 | (+) | not used | |||
338187.VIBHAR_05347 | (+) | not used | |||
338187.VIBHAR_05619 | (+) | ||||
338187.VIBHAR_00584 | (+) | ||||
338187.VIBHAR_00581 | (+) | ||||
338187.VIBHAR_02754 | (+) | ||||
338187.VIBHAR_06981 | (+) | not used | |||
338187.VIBHAR_03242 | (+) | ||||
338187.VIBHAR_01063 | (+) | ||||
338187.VIBHAR_05186 | (+) | ||||
338187.VIBHAR_04740 | (+) | ||||
338187.VIBHAR_03165 | (+) | ||||
338187.VIBHAR_06519 | (+) | ||||
338187.VIBHAR_06516 | (+) | ||||
338187.VIBHAR_05795 | (+) | ||||
338187.VIBHAR_05799 | (+) | not used | |||
338187.VIBHAR_01309 | (+) | ||||
338187.VIBHAR_02516 | (+) | ||||
338187.VIBHAR_02519 | (+) | ||||
338187.VIBHAR_05882 | (+) | ||||
338187.VIBHAR_06144 | (+) | ||||
338187.VIBHAR_05943 | (+) | ||||
338187.VIBHAR_00277 | (+) | ||||
338187.VIBHAR_00892 | (+) | ||||
338187.VIBHAR_00897 | (+) | ||||
338187.VIBHAR_06339 | (+) | ||||
338187.VIBHAR_01329 | (+) | ||||
338187.VIBHAR_05447 | (+) | ||||
338187.VIBHAR_07012 | (+) | not used | |||
338187.VIBHAR_05148 | (+) | not used | |||
338187.VIBHAR_06162 | (+) | ||||
338187.VIBHAR_05920 | (+) | ||||
338187.VIBHAR_00258 | (+) | not used | |||
338187.VIBHAR_00255 | (+) | ||||
338187.VIBHAR_01691 | (+) | ||||
338187.VIBHAR_02800 | (+) | ||||
338187.VIBHAR_02806 | (+) | ||||
338187.VIBHAR_06316 | (+) | not used | |||
338187.VIBHAR_05466 | (+) | ||||
338187.VIBHAR_01597 | (+) | ||||
338187.VIBHAR_00754 | (+) | ||||
338187.VIBHAR_03417 | (+) | ||||
338187.VIBHAR_03543 | (+) | ||||
338187.VIBHAR_03410 | (+) | ||||
338187.VIBHAR_02866 | (+) | ||||
338187.VIBHAR_02862 | (+) | not used | |||
338187.VIBHAR_06375 | (+) | ||||
338187.VIBHAR_04995 | (+) | not used | |||
338187.VIBHAR_02455 | (+) | ||||
338187.VIBHAR_02456 | (+) | ||||
338187.VIBHAR_06296 | (+) | ||||
338187.VIBHAR_06122 | (+) | ||||
338187.VIBHAR_06556 | (+) | ||||
338187.VIBHAR_00660 | (+) | ||||
338187.VIBHAR_00561 | (+) | ||||
338187.VIBHAR_00382 | (+) | ||||
338187.VIBHAR_01386 | (+) | ||||
338187.VIBHAR_01831 | (+) | ||||
338187.VIBHAR_06953 | (+) | ||||
338187.VIBHAR_05388 | (+) | ||||
338187.VIBHAR_02436 | (+) | ||||
338187.VIBHAR_05730 | (+) | ||||
338187.VIBHAR_01858 | (+) | ||||
338187.VIBHAR_02176 | (+) | ||||
338187.VIBHAR_01285 | (+) | not used | |||
338187.VIBHAR_01288 | (+) | ||||
338187.VIBHAR_06258 | (+) | ||||
338187.VIBHAR_03106 | (+) | ||||
338187.VIBHAR_05506 | (+) | ||||
338187.VIBHAR_06462 | (+) | ||||
338187.VIBHAR_00314 | (+) | ||||
338187.VIBHAR_03109 | (+) | ||||
338187.VIBHAR_06889 | (+) | ||||
338187.VIBHAR_01871 | (+) | ||||
338187.VIBHAR_02995 | (+) | not used | |||
338187.VIBHAR_06064 | (+) | ||||
338187.VIBHAR_06069 | (+) | ||||
338187.VIBHAR_06471 | (+) | ||||
338187.VIBHAR_00134 | (+) | ||||
338187.VIBHAR_00130 | (+) | ||||
338187.VIBHAR_01402 | (+) | ||||
338187.VIBHAR_06433 | (+) | not used | |||
338187.VIBHAR_05988 | (+) | ||||
338187.VIBHAR_03327 | (+) | ||||
338187.VIBHAR_01675 | (+) | ||||
338187.VIBHAR_05778 | (+) | ||||
338187.VIBHAR_05771 | (+) | ||||
338187.VIBHAR_05774 | (+) | not used | |||
338187.VIBHAR_05776 | (+) | ||||
338187.VIBHAR_04912 | (+) | ||||
338187.VIBHAR_04917 | (+) | ||||
338187.VIBHAR_04914 | (+) | ||||
338187.VIBHAR_04919 | (+) | ||||
338187.VIBHAR_03448 | (+) | ||||
338187.VIBHAR_03443 | (+) | ||||
338187.VIBHAR_06269 | (+) | ||||
338187.VIBHAR_01423 | (+) | ||||
338187.VIBHAR_06840 | (+) | ||||
338187.VIBHAR_06848 | (+) | ||||
338187.VIBHAR_00307 | (+) | ||||
338187.VIBHAR_00305 | (+) | ||||
338187.VIBHAR_05225 | (+) | ||||
338187.VIBHAR_05556 | (+) | ||||
338187.VIBHAR_02079 | (+) | ||||
338187.VIBHAR_05853 | (+) | ||||
338187.VIBHAR_06001 | (+) | ||||
338187.VIBHAR_02245 | (+) | not used | |||
338187.VIBHAR_04956 | (+) | ||||
338187.VIBHAR_06583 | (+) | ||||
338187.VIBHAR_05277 | (+) | not used | |||
338187.VIBHAR_06577 | (+) | ||||
338187.VIBHAR_06575 | (+) | ||||
338187.VIBHAR_06809 | (+) | ||||
338187.VIBHAR_05873 | (+) | ||||
338187.VIBHAR_05871 | (+) | ||||
338187.VIBHAR_05877 | (+) | ||||
338187.VIBHAR_01569 | (+) | ||||
338187.VIBHAR_02269 | (+) | ||||
338187.VIBHAR_06218 | (+) | ||||
338187.VIBHAR_03081 | (+) | ||||
338187.VIBHAR_01779 | (+) | ||||
338187.VIBHAR_01774 | (+) | ||||
338187.VIBHAR_05070 | (+) | ||||
338187.VIBHAR_01957 | (+) | ||||
338187.VIBHAR_01958 | (+) | not used | |||
338187.VIBHAR_06750 | (+) | ||||
338187.VIBHAR_00361 | (+) | ||||
338187.VIBHAR_05541 | (+) | not used | |||
338187.VIBHAR_00765 | (+) | ||||
338187.VIBHAR_03575 | (+) | ||||
338187.VIBHAR_05015 | (+) | ||||
338187.VIBHAR_04729 | (+) | ||||
338187.VIBHAR_02093 | (+) | ||||
338187.VIBHAR_06650 | (+) | ||||
338187.VIBHAR_03387 | (+) | ||||
338187.VIBHAR_03382 | (+) | ||||
338187.VIBHAR_07068 | (+) | not used | |||
338187.VIBHAR_00922 | (+) | ||||
338187.VIBHAR_01730 | (+) | ||||
338187.VIBHAR_05297 | (+) | not used | |||
338187.VIBHAR_04742 | (+) | not used | |||
338187.VIBHAR_04819 | (+) | ||||
338187.VIBHAR_02741 | (+) | ||||
338187.VIBHAR_05194 | (+) | ||||
338187.VIBHAR_05198 | (+) | ||||
338187.VIBHAR_02357 | (+) | ||||
338187.VIBHAR_06900 | (+) | ||||
338187.VIBHAR_05971 | (+) | ||||
338187.VIBHAR_00048 | (+) | ||||
338187.VIBHAR_00042 | (+) | ||||
338187.VIBHAR_02506 | (+) | ||||
338187.VIBHAR_04836 | (+) | ||||
338187.VIBHAR_07125 | (+) | ||||
338187.VIBHAR_06993 | (+) | ||||
338187.VIBHAR_03257 | (+) | ||||
338187.VIBHAR_03008 | (+) | ||||
338187.VIBHAR_06526 | (+) | not used | |||
338187.VIBHAR_05780 | (+) | ||||
338187.VIBHAR_02830 | (+) | ||||
338187.VIBHAR_02834 | (+) | ||||
338187.VIBHAR_05433 | (+) | not used | |||
338187.VIBHAR_02784 | (+) | ||||
338187.VIBHAR_02787 | (+) | ||||
338187.VIBHAR_03272 | (+) | ||||
338187.VIBHAR_02317 | (+) | ||||
338187.VIBHAR_02312 | (+) | ||||
338187.VIBHAR_02310 | (+) | ||||
338187.VIBHAR_03680 | (+) | ||||
338187.VIBHAR_06300 | (+) | ||||
338187.VIBHAR_02104 | (+) | ||||
338187.VIBHAR_06446 | (+) | ||||
338187.VIBHAR_00867 | (+) | ||||
338187.VIBHAR_00747 | (+) | ||||
338187.VIBHAR_00744 | (+) | ||||
338187.VIBHAR_05134 | (+) | ||||
338187.VIBHAR_06915 | (+) | not used | |||
338187.VIBHAR_06565 | (+) | ||||
338187.VIBHAR_05911 | (+) | ||||
338187.VIBHAR_00534 | (+) | ||||
338187.VIBHAR_01115 | (+) | ||||
338187.VIBHAR_01806 | (+) | ||||
338187.VIBHAR_01805 | + | ||||
338187.VIBHAR_02295 | (+) | ||||
338187.VIBHAR_03189 | (+) | ||||
338187.VIBHAR_03184 | (+) | ||||
338187.VIBHAR_06547 | (+) | not used | |||
338187.VIBHAR_01581 | (+) | ||||
338187.VIBHAR_06116 | (+) | ||||
338187.VIBHAR_06344 | (+) | ||||
338187.VIBHAR_01399 | (+) | ||||
338187.VIBHAR_05498 | (+) | not used | |||
338187.VIBHAR_00707 | (+) | ||||
338187.VIBHAR_06285 | (+) | not used | |||
338187.VIBHAR_02622 | (+) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveT3 predictions using new standard model 2.0.1 (PROTEINS.NEW.EFFECTIVET3)
- EffectiveT3 predictions using old standard model 1.0.1 (PROTEINS.OLD.EFFECTIVET3)
- EffectiveCCBD predictions (PROTEINS.CHAPERONES.TXT)
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: YES (FDR = 0.5 %)
- Functional Type III secretion system: YES (FDR = 12.5 %)
Estimated copy number = 1.8 (18/10 KEGG proteins)
- Functional Type IV secretion system: NO (FDR = 7.2 %)
- Functional Type VI secretion system: YES (FDR = 7.7 %)
Estimated copy number = 1.375 (11/8 KEGG proteins)
Individual results for each secretion system
- List of 100 most important COGs/NOGs for prediction of functional Type III secretion system (T3_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type IV secretion system (T4_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type VI secretion system (T6_top100_COGS.xls)
- List of COGs assigned to Type III secretion system in KEGG (T3SS_KEGG_cmp.xls)
- List of COGs assigned to Type IV secretion system in KEGG (T4SS_KEGG_cmp.xls)
- List of COGs assigned to Type VI secretion system in KEGG (T6SS_KEGG_cmp.xls)
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
Estimated copy number = 1.8 (18/10 KEGG proteins)
Estimated copy number = 1.375 (11/8 KEGG proteins)