Metamenu

Effective results for Dorea longicatena DSM 13814 (eggnog40)

Summary

Number of putative secreted proteins: 91
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 29 eukaryotic-like domains, contained in 91 proteins (0 high, 91 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
411462.DORLON_00686(PF01554)(ER)
411462.DORLON_01403(PF01554)ER
411462.DORLON_01223(PF01554)ER
411462.DORLON_02785(PF01554)(mitochondrial)
411462.DORLON_00404(PF00209)(ER)
411462.DORLON_01422(PF12646)(mitochondrial)
411462.DORLON_00885(PF00438) (PF02773) (PF02772)
411462.DORLON_00338(PF01554)(ER)
411462.DORLON_02496(PF01554)(ER)
411462.DORLON_00980(PF01992)(mitochondrial)
411462.DORLON_01348(PF00438) (PF02773) (PF02772)
411462.DORLON_02847(PF01554)ER; (ER)
411462.DORLON_00179(PF00438) (PF02773) (PF02772)
411462.DORLON_00150(PF01554)(ER); (mitochondrial)
411462.DORLON_00947(PF00137)(ER)
411462.DORLON_03020(PF13518)(ER)
411462.DORLON_00484(PF01554)ER
411462.DORLON_01443(PF00209)(ER)
411462.DORLON_02794(PF01554)ER
411462.DORLON_00907(PF00137)ER
411462.DORLON_00055(PF00121)(mitochondrial)
411462.DORLON_01257(PF01554)(ER); ER
411462.DORLON_01214(PF12821) (PF06738)
411462.DORLON_00869(PF13518)(mitochondrial)
411462.DORLON_00791(PF00847)(mitochondrial)
411462.DORLON_00652(PF00209)(ER)
411462.DORLON_01160(PF01416)(mitochondrial)
411462.DORLON_00978(PF00137)(mitochondrial)
411462.DORLON_02958(PF13518)(mitochondrial)
411462.DORLON_00004(PF12821) (PF06738)
411462.DORLON_00005(PF12821) (PF06738)
411462.DORLON_01523(PF13518)(mitochondrial)
411462.DORLON_01291(PF13518)(mitochondrial)
411462.DORLON_00908(PF01496)(mitochondrial)
411462.DORLON_02825(PF01554)
411462.DORLON_02323(PF00209)
411462.DORLON_01786(PF13155)
411462.DORLON_01119(PF02127)
411462.DORLON_02498(PF01554)
411462.DORLON_00654(PF16189)
411462.DORLON_01327(PF05257)
411462.DORLON_00298(PF02127)
411462.DORLON_00295(PF02127)
411462.DORLON_02463(PF16189)
411462.DORLON_01769(PF05257)
411462.DORLON_01911(PF01554)
411462.DORLON_01590(PF01554)
411462.DORLON_01351(PF12224)
411462.DORLON_01174(PF01416)
411462.DORLON_02586(PF01554)
411462.DORLON_02291(PF01554)
411462.DORLON_00741(PF06738)
411462.DORLON_00740(PF12821)
411462.DORLON_00180(PF13155)
411462.DORLON_02923(PF08357)
411462.DORLON_01347(PF13155)
411462.DORLON_00199(PF13155)
411462.DORLON_02344(PF00209)
411462.DORLON_00175(PF12224)
411462.DORLON_01190(PF01554)
411462.DORLON_01398(PF01554)
411462.DORLON_02435(PF00121)
411462.DORLON_02059(PF01416)
411462.DORLON_02727(PF01795)
411462.DORLON_02540(PF01554)
411462.DORLON_00979(PF01496)
411462.DORLON_00973(PF01813)
411462.DORLON_00975(PF16886)
411462.DORLON_00976(PF01991)
411462.DORLON_00977(PF01990)
411462.DORLON_00396(PF00121)
411462.DORLON_02639(PF16011)
411462.DORLON_00838(PF01554)
411462.DORLON_01948(PF01795)
411462.DORLON_00235(PF11074)
411462.DORLON_01531(PF00165)not used
411462.DORLON_02187(PF00209)not used
411462.DORLON_02186(PF00209)
411462.DORLON_03033(PF13518)
411462.DORLON_00731(PF13155)
411462.DORLON_03009(PF13518)
411462.DORLON_00592(PF05257)
411462.DORLON_00207(PF05257)
411462.DORLON_02347(PF16189)
411462.DORLON_02743(PF01554)
411462.DORLON_01434(PF01554)
411462.DORLON_00901(PF01813)
411462.DORLON_00903(PF16886)
411462.DORLON_00905(PF01992)
411462.DORLON_00904(PF01990)
411462.DORLON_00906(PF01991)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================