Metamenu

Effective results for Streptomyces pristinaespiralis ATCC 25486 (eggnog40)

Summary

Number of putative secreted proteins: 161
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 47 eukaryotic-like domains, contained in 161 proteins (5 high, 156 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
457429.SSDG_06871(PF11380) PF17103 PF17101 PF17102(mitochondrial)
457429.SSDG_06070(PF11380) PF17103 PF17101 PF17102
457429.SSDG_00183(PF09118) (PF07250)(mitochondrial)
457429.SSDG_01271(PF11380) PF17103 PF17101 PF17102
457429.SSDG_02519(PF16655) (PF09423)mitochondrial
457429.SSDG_03427(PF16655) (PF09423)mitochondrial; (mitochondrial)
457429.SSDG_06643(PF03995) (PF13517)mitochondrial; (mitochondrial)
457429.SSDG_07074(PF16655) (PF09423)(mitochondrial)
457429.SSDG_03102(PF11380) PF17103 PF17101 PF17102
457429.SSDG_03146(PF08592)ER
457429.SSDG_06244(PF17032)ER
457429.SSDG_03229(PF01510)ER
457429.SSDG_01231(PF07228)mitochondrial; (mitochondrial)
457429.SSDG_05711(PF09118)ER
457429.SSDG_07388(PF01670)ER
457429.SSDG_07383(PF02983)ER
457429.SSDG_05860(PF03211)ER
457429.SSDG_01993(PF02983)(mitochondrial)
457429.SSDG_05216(PF07228)(mitochondrial)
457429.SSDG_01172(PF05787)(mitochondrial)
457429.SSDG_05337(PF01186)mitochondrial; (mitochondrial)
457429.SSDG_02201(PF16317)ER
457429.SSDG_00933(PF16655) (PF09423)(ER)
457429.SSDG_05055(PF01510)ER
457429.SSDG_02222(PF01670)(ER)
457429.SSDG_03242(PF07228)mitochondrial
457429.SSDG_00841(PF13517)mitochondrial; (mitochondrial)
457429.SSDG_01393(PF16483)ER
457429.SSDG_06181(PF16483)mitochondrial
457429.SSDG_01571(PF02983)mitochondrial
457429.SSDG_06211(PF13517)ER
457429.SSDG_00824(PF02983)ER
457429.SSDG_01558(PF03644)mitochondrial
457429.SSDG_01382(PF13517)ER
457429.SSDG_06006(PF13517)mitochondrial; ER
457429.SSDG_05812(PF17032)ER
457429.SSDG_00138(PF02983)ER
457429.SSDG_06049(PF05653)ER
457429.SSDG_05001(PF01510)(mitochondrial)
457429.SSDG_05004(PF13653)mitochondrial; (mitochondrial)
457429.SSDG_00480(PF13517)(ER)
457429.SSDG_01613(PF07228)ER
457429.SSDG_02180(PF13517)ER
457429.SSDG_02986(PF05787)(mitochondrial); mitochondrial
457429.SSDG_01306(PF03995)ER; (ER)
457429.SSDG_02002(PF02983)mitochondrial
457429.SSDG_02614(PF05653)ER
457429.SSDG_01125(PF07228)mitochondrial
457429.SSDG_05542(PF17048)(ER)
457429.SSDG_06849(PF08592)ER
457429.SSDG_00382(PF07228)(mitochondrial)
457429.SSDG_02846(PF13517) (PF01510)
457429.SSDG_02790(PF07228)(mitochondrial)
457429.SSDG_05844(PF01094)(mitochondrial)
457429.SSDG_05717(PF13517)(mitochondrial)
457429.SSDG_07494(PF01154) (PF08540)
457429.SSDG_04164(PF01510)(plastid)
457429.SSDG_02921(PF07228)(ER)
457429.SSDG_05981(PF07555)plastid
457429.SSDG_07296(PF03029)(mitochondrial)
457429.SSDG_05437(PF13517)(mitochondrial)
457429.SSDG_02357(PF16655) (PF09423)
457429.SSDG_05702(PF03029)(plastid)
457429.SSDG_05665(PF01154) (PF08540)
457429.SSDG_04155(PF01457)(mitochondrial)
457429.SSDG_03805(PF05787)
457429.SSDG_07440(PF07228)
457429.SSDG_01939(PF09414)
457429.SSDG_02808(PF03029)
457429.SSDG_07026(PF12138)
457429.SSDG_07559(PF08592)
457429.SSDG_03083(PF13517)
457429.SSDG_05540(PF07228)
457429.SSDG_00064(PF03029)
457429.SSDG_04501(PF07228)
457429.SSDG_07385(PF07228)
457429.SSDG_05030(PF08592)
457429.SSDG_06373(PF03995)
457429.SSDG_01293(PF07228)
457429.SSDG_01294(PF07228)
457429.SSDG_01297(PF07228)
457429.SSDG_02053(PF00070)
457429.SSDG_03908(PF07228)
457429.SSDG_05157(PF07228)
457429.SSDG_02996(PF07228)
457429.SSDG_01311(PF07228)
457429.SSDG_00964(PF01564)
457429.SSDG_05929(PF00102)
457429.SSDG_06649(PF03029)
457429.SSDG_05680(PF01564)
457429.SSDG_07471(PF11338)
457429.SSDG_00301(PF01510)
457429.SSDG_03519(PF01564)
457429.SSDG_02607(PF07228)
457429.SSDG_03233(PF07228)
457429.SSDG_06851(PF07228)
457429.SSDG_07439(PF07228)not used
457429.SSDG_00845(PF07228)
457429.SSDG_03701(PF14437)
457429.SSDG_01518(PF07228)
457429.SSDG_02093(PF13455)
457429.SSDG_05604(PF12138)
457429.SSDG_05986(PF03029)
457429.SSDG_02660(PF07228)
457429.SSDG_03336(PF01510)
457429.SSDG_02814(PF07555)
457429.SSDG_04899(PF09118)
457429.SSDG_00645(PF05787)
457429.SSDG_06005(PF13517)
457429.SSDG_05756PF14432
457429.SSDG_00527(PF07228)
457429.SSDG_06256(PF03029)
457429.SSDG_04494(PF07228)
457429.SSDG_01591(PF01510)
457429.SSDG_00464(PF07228)
457429.SSDG_04986(PF03029)
457429.SSDG_02593(PF13517)
457429.SSDG_03420(PF07228)
457429.SSDG_07521(PF06339)
457429.SSDG_05218(PF14437)
457429.SSDG_00644(PF07228)
457429.SSDG_06599(PF07228)
457429.SSDG_06046(PF02983)
457429.SSDG_07549(PF06339)
457429.SSDG_05026(PF09265)
457429.SSDG_00013(PF07228)
457429.SSDG_06945(PF09423)
457429.SSDG_01282(PF09511)
457429.SSDG_04556(PF11338)
457429.SSDG_02258(PF05706)
457429.SSDG_07401(PF07228)
457429.SSDG_04837(PF07228)
457429.SSDG_07580(PF01510)
457429.SSDG_07581(PF05787)
457429.SSDG_02395(PF14311)
457429.SSDG_05187(PF07228)
457429.SSDG_06321(PF07228)
457429.SSDG_01304(PF01510)
457429.SSDG_01305(PF05787)
457429.SSDG_04275(PF03029)
457429.SSDG_03956(PF07228)
457429.SSDG_04279(PF03029)
457429.SSDG_00797(PF03995)
457429.SSDG_06821(PF01564)
457429.SSDG_02003(PF02983)not used
457429.SSDG_03977(PF09414)
457429.SSDG_00955(PF03029)
457429.SSDG_05347(PF14437)
457429.SSDG_06117(PF11338)
457429.SSDG_04758(PF03995)
457429.SSDG_01120(PF03936)
457429.SSDG_02904(PF07228)
457429.SSDG_02900(PF01564)
457429.SSDG_02639(PF03211)
457429.SSDG_07153(PF06339)
457429.SSDG_02653(PF07228)
457429.SSDG_03385(PF07228)
457429.SSDG_01839(PF07228)
457429.SSDG_00812(PF07228)
457429.SSDG_06418(PF04928)
457429.SSDG_00349(PF13517)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================