Effective results for Anoxybacillus flavithermus WK1 (eggnog40)

Summary

Number of putative secreted proteins: 45
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 14 eukaryotic-like domains, contained in 45 proteins (12 high, 33 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
491915.Aflv_0252(PF13592) PF13551(mitochondrial)
491915.Aflv_2375(PF13592) PF13551(mitochondrial)
491915.Aflv_0154(PF13592) PF13551(mitochondrial)
491915.Aflv_0165PF13551(mitochondrial)
491915.Aflv_2268(PF12323)mitochondrial
491915.Aflv_1811(PF12323)mitochondrial
491915.Aflv_0655(PF08761)(mitochondrial)
491915.Aflv_2682(PF12323)mitochondrial
491915.Aflv_2777(PF12323)mitochondrial; (mitochondrial)
491915.Aflv_1769(PF12323)mitochondrial
491915.Aflv_2013(PF12323)(mitochondrial)
491915.Aflv_2124(PF12323)mitochondrial
491915.Aflv_0392(PF12323)mitochondrial
491915.Aflv_0713(PF12323)mitochondrial
491915.Aflv_2102(PF03050)(mitochondrial)
491915.Aflv_0219(PF03050)(mitochondrial)
491915.Aflv_1645(PF13592) PF13551
491915.Aflv_0526(PF08761)(mitochondrial)
491915.Aflv_1427(PF13592) PF13551
491915.Aflv_2062(PF03050)(mitochondrial)
491915.Aflv_2657(PF05225)(mitochondrial)
491915.Aflv_2619(PF09752)(mitochondrial)
491915.Aflv_2214(PF13592) PF13551
491915.Aflv_1172(PF03050)(mitochondrial)
491915.Aflv_0157(PF13592) PF13551
491915.Aflv_0400(PF12606)ER; not used
491915.Aflv_2483(PF03050)
491915.Aflv_0980(PF05495)
491915.Aflv_2454(PF03050)
491915.Aflv_2455(PF03050)
491915.Aflv_2457(PF13592)
491915.Aflv_0993(PF12323)
491915.Aflv_1652(PF03050)
491915.Aflv_2210(PF12323)
491915.Aflv_0253(PF03050)
491915.Aflv_0266PF07716
491915.Aflv_2513PF00688
491915.Aflv_1221(PF03050)
491915.Aflv_2373(PF13592)
491915.Aflv_2576(PF03161)
491915.Aflv_2380(PF03050)
491915.Aflv_1551PF06888
491915.Aflv_1170PF13551
491915.Aflv_1627(PF02171)
491915.Aflv_0159(PF03050)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================