Metamenu

Effective results for Thermobaculum terrenum ATCC BAA-798 (eggnog40)

Summary

Number of putative secreted proteins: 77
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 18 eukaryotic-like domains, contained in 77 proteins (5 high, 72 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525904.Tter_2603(PF01408) (PF02894)mitochondrial
525904.Tter_0406(PF01408) (PF02894)(mitochondrial)
525904.Tter_2247(PF01408) (PF02894)ER; (ER)
525904.Tter_1526(PF01408) (PF02894)mitochondrial
525904.Tter_2777(PF11721)ER
525904.Tter_2776PF12904ER
525904.Tter_0435(PF08239)ER
525904.Tter_2814(PF01408)(ER)
525904.Tter_1916(PF01408) (PF02894)(mitochondrial)
525904.Tter_0573(PF08239)ER
525904.Tter_0577(PF08239)ER
525904.Tter_2134(PF01408)ER
525904.Tter_1930(PF01408) (PF02894)(mitochondrial)
525904.Tter_1114(PF13529)ER
525904.Tter_0217(PF01408) (PF02894)(ER)
525904.Tter_0517(PF13529)mitochondrial; (mitochondrial)
525904.Tter_2666PF12904 (PF13204)(mitochondrial)
525904.Tter_1781(PF08239)ER
525904.Tter_0009(PF08239)ER
525904.Tter_1468(PF13529)ER
525904.Tter_1681(PF08239)ER
525904.Tter_2866(PF08239)mitochondrial
525904.Tter_2792(PF11721)ER
525904.Tter_1474(PF01408)mitochondrial; (mitochondrial)
525904.Tter_1997(PF01408)(ER)
525904.Tter_2532(PF01408)(ER); mitochondrial
525904.Tter_1881(PF01408)ER
525904.Tter_2606(PF01408) (PF02894)
525904.Tter_2602(PF01408) (PF02894)
525904.Tter_0446(PF01408) (PF02894)
525904.Tter_0156(PF01408) (PF02894)
525904.Tter_0541(PF01408) (PF02894)
525904.Tter_2141(PF01408)(ER)
525904.Tter_0558(PF01408) (PF02894)
525904.Tter_2735(PF08239)(ER)
525904.Tter_1908(PF01408) (PF02894)
525904.Tter_1905(PF01408)(mitochondrial)
525904.Tter_2138(PF01408) (PF02894)
525904.Tter_1937(PF01408)(ER)
525904.Tter_1808(PF01408) (PF02894)
525904.Tter_0211(PF04685) (PF12215)
525904.Tter_0694(PF02971) (PF07837)
525904.Tter_1925(PF01408) (PF02894)
525904.Tter_0652(PF01408) (PF02894)
525904.Tter_2468(PF04685) (PF12215)
525904.Tter_1998PF12904 (PF13204)
525904.Tter_0274(PF01408) (PF02894)
525904.Tter_1523(PF01408) (PF02894)
525904.Tter_2197(PF01408) (PF02894)
525904.Tter_1882(PF01408) (PF02894)
525904.Tter_2515(PF02065)
525904.Tter_2514(PF02065)
525904.Tter_0633(PF13529)
525904.Tter_0636(PF04455)
525904.Tter_2700(PF01408)
525904.Tter_1572(PF01408)
525904.Tter_1571(PF01408)
525904.Tter_2265(PF01408)
525904.Tter_1907(PF13204)
525904.Tter_0971(PF09445)
525904.Tter_0322(PF01408)
525904.Tter_2107(PF08239)
525904.Tter_1105(PF01408)
525904.Tter_0200PF13912
525904.Tter_1484(PF05221)
525904.Tter_1485(PF05221)
525904.Tter_2848(PF13529)
525904.Tter_2448(PF02065)
525904.Tter_0793(PF05221)
525904.Tter_1683(PF08239)
525904.Tter_2313(PF01408)
525904.Tter_0101PF09279
525904.Tter_0814(PF01408)
525904.Tter_2324(PF02065)
525904.Tter_2521(PF14307)
525904.Tter_2439(PF02065)
525904.Tter_2508(PF14307)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================