Metamenu

Effective results for Alloprevotella tannerae ATCC 51259 (eggnog40)

Summary

Number of putative secreted proteins: 64
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 13 eukaryotic-like domains, contained in 64 proteins (27 high, 37 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
626522.GCWU000325_02234PF00216(mitochondrial)
626522.GCWU000325_02665(PF13306)ER
626522.GCWU000325_01719(PF13306)ER
626522.GCWU000325_00533PF00216mitochondrial
626522.GCWU000325_01274(PF13306)(ER); (mitochondrial)
626522.GCWU000325_01812PF00216(mitochondrial)
626522.GCWU000325_00727PF00216mitochondrial
626522.GCWU000325_01896PF00216mitochondrial
626522.GCWU000325_00999PF00216mitochondrial
626522.GCWU000325_02491PF00216mitochondrial
626522.GCWU000325_00965PF00216mitochondrial
626522.GCWU000325_01562PF00216mitochondrial
626522.GCWU000325_02485PF00216mitochondrial
626522.GCWU000325_02151(PF13306)mitochondrial; (mitochondrial)
626522.GCWU000325_01571(PF13306)ER
626522.GCWU000325_01578PF00216mitochondrial
626522.GCWU000325_00764(PF13306)ER
626522.GCWU000325_00891PF00216mitochondrial
626522.GCWU000325_00939PF00216mitochondrial
626522.GCWU000325_01692PF00216(mitochondrial)
626522.GCWU000325_00929PF00216mitochondrial
626522.GCWU000325_02575(PF13306)ER
626522.GCWU000325_02574(PF13306)ER
626522.GCWU000325_02577(PF13306)ER
626522.GCWU000325_02576(PF13306)ER
626522.GCWU000325_01405(PF13306)ER
626522.GCWU000325_01054PF00216mitochondrial
626522.GCWU000325_00241PF00216mitochondrial
626522.GCWU000325_00638(PF07837) (PF02971)
626522.GCWU000325_00355PF00216(mitochondrial)
626522.GCWU000325_01644(PF01131)(mitochondrial)
626522.GCWU000325_01177(PF01715)(ER)
626522.GCWU000325_01286(PF13683)
626522.GCWU000325_01660(PF13683)not used
626522.GCWU000325_01729PF00216
626522.GCWU000325_01871PF16269
626522.GCWU000325_00952(PF01131)
626522.GCWU000325_02463PF06552
626522.GCWU000325_02840PF00216
626522.GCWU000325_02274PF00216not used
626522.GCWU000325_00342PF00216
626522.GCWU000325_01268PF07959
626522.GCWU000325_01249(PF13683)
626522.GCWU000325_01758(PF13683)
626522.GCWU000325_01759(PF01131)
626522.GCWU000325_01767(PF13683)not used
626522.GCWU000325_01766(PF13683)not used
626522.GCWU000325_01356(PF05693)
626522.GCWU000325_01686PF00216
626522.GCWU000325_01685PF00216
626522.GCWU000325_00883(PF15588)
626522.GCWU000325_00887(PF13306)
626522.GCWU000325_02034(PF01131)
626522.GCWU000325_01360(PF01131)
626522.GCWU000325_01147(PF01715)
626522.GCWU000325_02319(PF13683)
626522.GCWU000325_02768(PF13683)not used
626522.GCWU000325_02198(PF13306)
626522.GCWU000325_00469(PF13683)
626522.GCWU000325_02568(PF01131)
626522.GCWU000325_01321(PF04505)
626522.GCWU000325_01320(PF04505)
626522.GCWU000325_00273(PF13683)
626522.GCWU000325_00489(PF13683)not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================